RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 PLXNA3P51805 1871 aa22.12■■□□□ 1.13
VRK2-201ENST00000340157 MAP2K7O14733 419 aa22.12■■□□□ 1.13
VRK2-201ENST00000340157 ACRP10323 421 aa22.12■■□□□ 1.13
VRK2-201ENST00000340157 RAG1P15918 1043 aa22.12■■□□□ 1.13
VRK2-201ENST00000340157 IL4RP24394 825 aa22.12■■□□□ 1.13
VRK2-201ENST00000340157 SULT1E1P49888 294 aa22.12■■□□□ 1.13
VRK2-201ENST00000340157 CDH6P55285 790 aa22.12■■□□□ 1.13
VRK2-201ENST00000340157 WDR5P61964 334 aaKnown RBP22.12■■□□□ 1.13
VRK2-201ENST00000340157 BOLA3Q53S33 107 aa22.12■■□□□ 1.13
VRK2-201ENST00000340157 MFSD5Q6N075 450 aa22.12■■□□□ 1.13
VRK2-201ENST00000340157 UBE2Q1Q7Z7E8 422 aa22.12■■□□□ 1.13
VRK2-201ENST00000340157 DCP1BQ8IZD4 617 aaKnown RBP22.12■■□□□ 1.13
VRK2-201ENST00000340157 CCDC185Q8N715 623 aa22.12■■□□□ 1.13
VRK2-201ENST00000340157 RUNDC3BQ96NL0 473 aa22.12■■□□□ 1.13
VRK2-201ENST00000340157 MAGEB5Q9BZ81 275 aa22.12■■□□□ 1.13
VRK2-201ENST00000340157 GREB1Q4ZG55 1949 aa22.11■■□□□ 1.13
VRK2-201ENST00000340157 MDM4O15151 490 aa22.11■■□□□ 1.13
VRK2-201ENST00000340157 EPHB4P54760 987 aa22.11■■□□□ 1.13
VRK2-201ENST00000340157 CUL1Q13616 776 aa22.11■■□□□ 1.13
VRK2-201ENST00000340157 ZNF280DQ6N043 979 aa22.11■■□□□ 1.13
VRK2-201ENST00000340157 BBS12Q6ZW61 710 aa22.11■■□□□ 1.13
VRK2-201ENST00000340157 SCML4Q8N228 414 aa22.11■■□□□ 1.13
VRK2-201ENST00000340157 TTC9BQ8N6N2 239 aa22.11■■□□□ 1.13
VRK2-201ENST00000340157 HAUS1Q96CS2 278 aa22.11■■□□□ 1.13
VRK2-201ENST00000340157 PGLYRP2Q96PD5 576 aa22.11■■□□□ 1.13
VRK2-201ENST00000340157 CALN1Q9BXU9 219 aa22.11■■□□□ 1.13
VRK2-201ENST00000340157 RAB17Q9H0T7 212 aa22.11■■□□□ 1.13
VRK2-201ENST00000340157 OR6C75A6NL08 312 aa22.11■■□□□ 1.13
VRK2-201ENST00000340157 LIASO43766 372 aa22.11■■□□□ 1.13
VRK2-201ENST00000340157 CST8O60676 142 aa22.11■■□□□ 1.13
VRK2-201ENST00000340157 VNN2O95498 520 aa22.11■■□□□ 1.13
VRK2-201ENST00000340157 ECEL1O95672 775 aa22.11■■□□□ 1.13
VRK2-201ENST00000340157 LTFP02788 710 aa22.11■■□□□ 1.13
VRK2-201ENST00000340157 GRIK1P39086 918 aa22.11■■□□□ 1.13
VRK2-201ENST00000340157 ELAVL2Q12926 359 aaKnown RBP22.11■■□□□ 1.13
VRK2-201ENST00000340157 CASP8Q14790 479 aa22.11■■□□□ 1.13
VRK2-201ENST00000340157 RNF168Q8IYW5 571 aaPredicted RBP22.11■■□□□ 1.13
VRK2-201ENST00000340157 EIF1ADQ8N9N8 165 aaKnown RBP22.11■■□□□ 1.13
VRK2-201ENST00000340157 FAM71BQ8TC56 605 aa22.11■■□□□ 1.13
VRK2-201ENST00000340157 FUBP3Q96I24 572 aaKnown RBP eCLIP22.11■■□□□ 1.13
VRK2-201ENST00000340157 NCAPGQ9BPX3 1015 aa22.11■■□□□ 1.13
VRK2-201ENST00000340157 PCDH18Q9HCL0 1135 aa22.11■■□□□ 1.13
VRK2-201ENST00000340157 HOMER3Q9NSC5 361 aa22.11■■□□□ 1.13
VRK2-201ENST00000340157 SAE1Q9UBE0 346 aaPredicted RBP22.11■■□□□ 1.13
VRK2-201ENST00000340157 DNPEPQ9ULA0 475 aa22.11■■□□□ 1.13
VRK2-201ENST00000340157 NEU2Q9Y3R4 380 aa22.11■■□□□ 1.13
VRK2-201ENST00000340157 DESP17661 470 aa22.1■■□□□ 1.13
VRK2-201ENST00000340157 GPR15P49685 360 aa22.1■■□□□ 1.13
VRK2-201ENST00000340157 SLC5A3P53794 718 aa22.1■■□□□ 1.13
VRK2-201ENST00000340157 DYNLT1P63172 113 aa22.1■■□□□ 1.13
VRK2-201ENST00000340157 NFE2Q16621 373 aaPredicted RBP22.1■■□□□ 1.13
VRK2-201ENST00000340157 FAM117BQ6P1L5 589 aa22.1■■□□□ 1.13
VRK2-201ENST00000340157 ATAD1Q8NBU5 361 aa22.1■■□□□ 1.13
VRK2-201ENST00000340157 STKLD1Q8NE28 680 aa22.1■■□□□ 1.13
VRK2-201ENST00000340157 IRGQQ8WZA9 623 aa22.1■■□□□ 1.13
VRK2-201ENST00000340157 MTMR10Q9NXD2 777 aa22.1■■□□□ 1.13
VRK2-201ENST00000340157 ATP8B1O43520 1251 aa22.09■■□□□ 1.13
VRK2-201ENST00000340157 RPL21P46778 160 aaKnown RBP22.09■■□□□ 1.13
VRK2-201ENST00000340157 KRT17Q04695 432 aa22.09■■□□□ 1.13
VRK2-201ENST00000340157 ERMARDQ5T6L9 678 aa22.09■■□□□ 1.13
VRK2-201ENST00000340157 EMBQ6PCB8 327 aa22.09■■□□□ 1.13
VRK2-201ENST00000340157 DRICH1Q6PGQ1 229 aaPredicted RBP22.09■■□□□ 1.13
VRK2-201ENST00000340157 PRSS55Q6UWB4 352 aaPredicted RBP22.09■■□□□ 1.13
VRK2-201ENST00000340157 SND1Q7KZF4 910 aaKnown RBP eCLIP22.09■■□□□ 1.13
VRK2-201ENST00000340157 FAM131BQ86XD5 332 aa22.09■■□□□ 1.13
VRK2-201ENST00000340157 CAVIN3Q969G5 261 aa22.09■■□□□ 1.13
VRK2-201ENST00000340157 TTPALQ9BTX7 342 aa22.09■■□□□ 1.13
VRK2-201ENST00000340157 PIGVQ9NUD9 493 aa22.09■■□□□ 1.13
VRK2-201ENST00000340157 FAM53CQ9NYF3 392 aa22.09■■□□□ 1.13
VRK2-201ENST00000340157 GRHL1Q9NZI5 618 aa22.09■■□□□ 1.13
VRK2-201ENST00000340157 RASAL2Q9UJF2 1139 aa22.09■■□□□ 1.13
VRK2-201ENST00000340157 SNX24Q9Y343 169 aa22.09■■□□□ 1.13
VRK2-201ENST00000340157 M0QYT0 321 aa22.09■■□□□ 1.13
VRK2-201ENST00000340157 AMHP03971 560 aa22.09■■□□□ 1.13
VRK2-201ENST00000340157 EN2P19622 333 aaPredicted RBP22.09■■□□□ 1.13
VRK2-201ENST00000340157 ALDH7A1P49419 539 aaKnown RBP22.09■■□□□ 1.13
VRK2-201ENST00000340157 PGFP49763 221 aa22.09■■□□□ 1.13
VRK2-201ENST00000340157 DRG2P55039 364 aaKnown RBP22.09■■□□□ 1.13
VRK2-201ENST00000340157 PDK2Q15119 407 aa22.09■■□□□ 1.13
VRK2-201ENST00000340157 DPYSL2Q16555 572 aa22.09■■□□□ 1.13
VRK2-201ENST00000340157 SDHAF4Q5VUM1 108 aa22.09■■□□□ 1.13
VRK2-201ENST00000340157 HDXQ7Z353 690 aa22.09■■□□□ 1.13
VRK2-201ENST00000340157 SCN4BQ8IWT1 228 aa22.09■■□□□ 1.13
VRK2-201ENST00000340157 ATL2Q8NHH9 583 aa22.09■■□□□ 1.13
VRK2-201ENST00000340157 ADAM32Q8TC27 787 aa22.09■■□□□ 1.13
VRK2-201ENST00000340157 EDEM1Q92611 657 aa22.09■■□□□ 1.13
VRK2-201ENST00000340157 IGSF21Q96ID5 467 aa22.09■■□□□ 1.13
VRK2-201ENST00000340157 CRISPLD1Q9H336 500 aa22.09■■□□□ 1.13
VRK2-201ENST00000340157 TMPRSS4Q9NRS4 437 aa22.09■■□□□ 1.13
VRK2-201ENST00000340157 STAP1Q9ULZ2 295 aa22.09■■□□□ 1.13
VRK2-201ENST00000340157 NCAM1P13591 858 aa22.08■■□□□ 1.13
VRK2-201ENST00000340157 L1CAMP32004 1257 aa22.08■■□□□ 1.13
VRK2-201ENST00000340157 RDXP35241 583 aaKnown RBP22.08■■□□□ 1.13
VRK2-201ENST00000340157 TNNT3P45378 269 aaPredicted RBP22.08■■□□□ 1.13
VRK2-201ENST00000340157 HLTFQ14527 1009 aaKnown RBP eCLIP22.08■■□□□ 1.13
VRK2-201ENST00000340157 OASLQ15646 514 aaKnown RBP22.08■■□□□ 1.13
VRK2-201ENST00000340157 BSPRYQ5W0U4 402 aa22.08■■□□□ 1.13
VRK2-201ENST00000340157 C16orf59Q7L2K0 433 aa22.08■■□□□ 1.13
VRK2-201ENST00000340157 RFX6Q8HWS3 928 aa22.08■■□□□ 1.13
VRK2-201ENST00000340157 TMEM199Q8N511 208 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms