RNA–Protein interactions for RNA: ENST00000339948.3

ZNF648-201, Transcript of zinc finger protein 648, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF648, Length 3,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF648-201ENST00000339948 SCN7AQ01118 1682 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 LAMB1P07942 1786 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 HNRNPCL1O60812 293 aaKnown RBP12.04□□□□□ -0.48
ZNF648-201ENST00000339948 HSPA4LO95757 839 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 MT-CO1P00395 513 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 HMGCRP04035 888 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 PSAPP07602 524 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 CSH1P0DML2 217 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 CSH2P0DML3 217 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 TYK2P29597 1187 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 ACTR2P61160 394 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 DYNC1I2Q13409 638 aaKnown RBP12.04□□□□□ -0.48
ZNF648-201ENST00000339948 PDE1CQ14123 709 aaPredicted RBP12.04□□□□□ -0.48
ZNF648-201ENST00000339948 TRMT5Q32P41 509 aaKnown RBP12.04□□□□□ -0.48
ZNF648-201ENST00000339948 ZNF677Q86XU0 584 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 RNF149Q8NC42 400 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 SKA1Q96BD8 255 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 FAM136AQ96C01 138 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 LRGUKQ96M69 825 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 MAGEB5Q9BZ81 275 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 KLHL4Q9C0H6 718 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 DDX56Q9NY93 547 aaKnown RBP12.04□□□□□ -0.48
ZNF648-201ENST00000339948 COQ4Q9Y3A0 265 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 SNCAIPQ9Y6H5 919 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 ATP8B3O60423 1300 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 DGAT1O75907 488 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 C4BPAP04003 597 aaKnown RBP12.03□□□□□ -0.48
ZNF648-201ENST00000339948 CCNG1P51959 295 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 NRF1Q16656 503 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 AMHR2Q16671 573 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 C11orf91Q3C1V1 193 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 DNAL1Q4LDG9 190 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 DPY19L2Q6NUT2 758 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 RBM44Q6ZP01 1051 aaKnown RBP12.03□□□□□ -0.48
ZNF648-201ENST00000339948 MARK2Q7KZI7 788 aaKnown RBP12.03□□□□□ -0.48
ZNF648-201ENST00000339948 TRIM50Q86XT4 487 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 KIAA0319LQ8IZA0 1049 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 FAM156AQ8NDB6 213 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 CPXM1Q96SM3 734 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 KLC2Q9H0B6 622 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 SEMA6AQ9H2E6 1030 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 GALNT8Q9NY28 637 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 SHANK3Q9BYB0 1731 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 TBC1D12O60347 775 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 SEC24DO94855 1032 aaPredicted RBP12.03□□□□□ -0.48
ZNF648-201ENST00000339948 ICAM1P05362 532 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 ITGAVP06756 1048 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 HNRNPCP07910 306 aaKnown RBP eCLIP12.03□□□□□ -0.48
ZNF648-201ENST00000339948 TBXAS1P24557 533 aaPredicted RBP12.03□□□□□ -0.48
ZNF648-201ENST00000339948 PMLP29590 882 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 GLRBP48167 497 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 PRAMEP78395 509 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 TBL3Q12788 808 aaKnown RBP12.03□□□□□ -0.48
ZNF648-201ENST00000339948 LAYNQ6UX15 382 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 NAT8LQ8N9F0 302 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 SCYL1Q96KG9 808 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 ANKRD27Q96NW4 1050 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 APOL2Q9BQE5 337 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 COPS7BQ9H9Q2 264 aaPredicted RBP12.03□□□□□ -0.48
ZNF648-201ENST00000339948 DTNAQ9Y4J8 743 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 KLHL33A6NCF5 533 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 DKC1O60832 514 aaKnown RBP eCLIP12.03□□□□□ -0.48
ZNF648-201ENST00000339948 SUPT3HO75486 399 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 TM7SF2O76062 418 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 PDCD2Q16342 344 aaPredicted RBP12.03□□□□□ -0.48
ZNF648-201ENST00000339948 CMC1Q7Z7K0 106 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 DHDDSQ86SQ9 333 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 TDRPQ86YL5 185 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 SNX31Q8N9S9 440 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 TTC13Q8NBP0 860 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 STKLD1Q8NE28 680 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 ATP2A3Q93084 1043 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 PPP2R3CQ969Q6 453 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 SPATA16Q9BXB7 569 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 IDI2Q9BXS1 227 aa12.03□□□□□ -0.48
ZNF648-201ENST00000339948 RPAP3Q9H6T3 665 aaPredicted RBP12.03□□□□□ -0.48
ZNF648-201ENST00000339948 ZNF70Q9UC06 446 aaPredicted RBP12.03□□□□□ -0.48
ZNF648-201ENST00000339948 DLEC1Q9Y238 1755 aa12.02□□□□□ -0.48
ZNF648-201ENST00000339948 XIRP1Q702N8 1843 aaKnown RBP12.02□□□□□ -0.48
ZNF648-201ENST00000339948 WDR27A2RRH5 827 aa12.02□□□□□ -0.48
ZNF648-201ENST00000339948 ACO1P21399 889 aaKnown RBP12.02□□□□□ -0.48
ZNF648-201ENST00000339948 FSTL1Q12841 308 aa12.02□□□□□ -0.48
ZNF648-201ENST00000339948 PDK3Q15120 406 aa12.02□□□□□ -0.48
ZNF648-201ENST00000339948 SLC5A9Q2M3M2 681 aa12.02□□□□□ -0.48
ZNF648-201ENST00000339948 TAS1R3Q7RTX0 852 aa12.02□□□□□ -0.48
ZNF648-201ENST00000339948 TRAPPC12Q8WVT3 735 aa12.02□□□□□ -0.48
ZNF648-201ENST00000339948 PPWD1Q96BP3 646 aaKnown RBP12.02□□□□□ -0.48
ZNF648-201ENST00000339948 LIN28AQ9H9Z2 209 aaKnown RBP12.02□□□□□ -0.48
ZNF648-201ENST00000339948 STRIP2Q9ULQ0 834 aa12.02□□□□□ -0.48
ZNF648-201ENST00000339948 CSPG5O95196 566 aa12.02□□□□□ -0.49
ZNF648-201ENST00000339948 TNNC2P02585 160 aa12.02□□□□□ -0.49
ZNF648-201ENST00000339948 OLIG2Q13516 323 aa12.02□□□□□ -0.49
ZNF648-201ENST00000339948 PHF13Q86YI8 300 aaPredicted RBP12.02□□□□□ -0.49
ZNF648-201ENST00000339948 SLC44A1Q8WWI5 657 aa12.02□□□□□ -0.49
ZNF648-201ENST00000339948 FAM149B1Q96BN6 582 aa12.02□□□□□ -0.49
ZNF648-201ENST00000339948 SGF29Q96ES7 293 aa12.02□□□□□ -0.49
ZNF648-201ENST00000339948 VAV1P15498 845 aa12.01□□□□□ -0.49
ZNF648-201ENST00000339948 MLH1P40692 756 aa12.01□□□□□ -0.49
ZNF648-201ENST00000339948 SLC1A6P48664 564 aa12.01□□□□□ -0.49
ZNF648-201ENST00000339948 GALK1P51570 392 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms