RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 MAN1C1Q9NR34 630 aa11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 TM9SF1O15321 606 aa11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 UGT1A9O60656 530 aa11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 USP1O94782 785 aa11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 ITGAVP06756 1048 aa11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 IREB2P48200 963 aaKnown RBP11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 CDK16Q00536 496 aa11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 KHDC1Q4VXA5 237 aaKnown RBP11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 SCARA3Q6AZY7 606 aa11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 LAYNQ6UX15 382 aa11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 METTL7BQ6UX53 244 aa11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 FAM183BPQ6ZVS7 135 aa11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 APOBEC3FQ8IUX4 373 aaKnown RBP11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 UGT1A7Q9HAW7 530 aa11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 UGT1A10Q9HAW8 530 aa11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 UGT1A8Q9HAW9 530 aa11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 MAP3K20Q9NYL2 800 aaKnown RBP11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 AP4E1Q9UPM8 1137 aa11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 LRP5O75197 1615 aa11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 DFFAO00273 331 aa11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 GNAT1P11488 350 aa11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 MGAT1P26572 445 aa11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 SLC45A4Q5BKX6 768 aa11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 SLC30A9Q6PML9 568 aa11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 BBS12Q6ZW61 710 aa11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 SLC7A14Q8TBB6 771 aa11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 NDRG1Q92597 394 aaKnown RBP11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 SPATC1LQ9H0A9 340 aa11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 ST6GALNAC4Q9H4F1 302 aa11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 PRMT7Q9NVM4 692 aaPredicted RBP11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 SLC17A6Q9P2U8 582 aa11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 VDRP11473 427 aa11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 ATP6V1B1P15313 513 aa11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 PAN2Q504Q3 1202 aaKnown RBP11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 HABP4Q5JVS0 413 aaKnown RBP11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 THEMIS2Q5TEJ8 643 aa11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 TAS1R3Q7RTX0 852 aa11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 EXOC8Q8IYI6 725 aa11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 ACO2Q99798 780 aaKnown RBP11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 LPIN3Q9BQK8 851 aa11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 CDT1Q9H211 546 aa11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 TASP1Q9H6P5 420 aa11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 SNTG2Q9NY99 539 aa11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 TSR3Q9UJK0 312 aaKnown RBP11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 GRID1Q9ULK0 1009 aa11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 TIMM13Q9Y5L4 95 aaPredicted RBP11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 BCORQ6W2J9 1755 aa11.47□□□□□ -0.57
SEMA4D-201ENST00000339861 SPATA31C2B4DYI2 1134 aa11.46□□□□□ -0.57
SEMA4D-201ENST00000339861 M0QYT0 321 aa11.46□□□□□ -0.57
SEMA4D-201ENST00000339861 TOP3BO95985 862 aaKnown RBP11.46□□□□□ -0.57
SEMA4D-201ENST00000339861 ERVK-10P10266 1014 aa11.46□□□□□ -0.57
SEMA4D-201ENST00000339861 CCDC130P13994 396 aa11.46□□□□□ -0.57
SEMA4D-201ENST00000339861 MSX2P35548 267 aaPredicted RBP11.46□□□□□ -0.57
SEMA4D-201ENST00000339861 SLC12A1Q13621 1099 aa11.46□□□□□ -0.57
SEMA4D-201ENST00000339861 EFHC2Q5JST6 749 aa11.46□□□□□ -0.57
SEMA4D-201ENST00000339861 KIAA0319LQ8IZA0 1049 aa11.46□□□□□ -0.57
SEMA4D-201ENST00000339861 ST13P4Q8IZP2 240 aaPredicted RBP11.46□□□□□ -0.57
SEMA4D-201ENST00000339861 CHST13Q8NET6 341 aa11.46□□□□□ -0.57
SEMA4D-201ENST00000339861 AFG1LQ8WV93 481 aa11.46□□□□□ -0.57
SEMA4D-201ENST00000339861 FAM136AQ96C01 138 aa11.46□□□□□ -0.57
SEMA4D-201ENST00000339861 SERAC1Q96JX3 654 aa11.46□□□□□ -0.57
SEMA4D-201ENST00000339861 XAB2Q9HCS7 855 aaKnown RBP11.46□□□□□ -0.57
SEMA4D-201ENST00000339861 C20orf96Q9NUD7 363 aaPredicted RBP11.46□□□□□ -0.57
SEMA4D-201ENST00000339861 ERAP1Q9NZ08 941 aa11.46□□□□□ -0.57
SEMA4D-201ENST00000339861 RABGEF1Q9UJ41 708 aa11.46□□□□□ -0.57
SEMA4D-201ENST00000339861 DRG1Q9Y295 367 aaKnown RBP11.46□□□□□ -0.57
SEMA4D-201ENST00000339861 SMCHD1A6NHR9 2005 aa11.46□□□□□ -0.57
SEMA4D-201ENST00000339861 KLRG2A4D1S0 409 aaPredicted RBP11.46□□□□□ -0.57
SEMA4D-201ENST00000339861 SPDYE16A6NNV3 312 aaPredicted RBP11.46□□□□□ -0.57
SEMA4D-201ENST00000339861 DYNC1LI2O43237 492 aaPredicted RBP11.46□□□□□ -0.57
SEMA4D-201ENST00000339861 HBP1O60381 514 aa11.46□□□□□ -0.57
SEMA4D-201ENST00000339861 ABHD2P08910 425 aa11.46□□□□□ -0.57
SEMA4D-201ENST00000339861 ATXN1P54253 815 aaKnown RBP11.46□□□□□ -0.57
SEMA4D-201ENST00000339861 MRPS35P82673 323 aaKnown RBP11.46□□□□□ -0.57
SEMA4D-201ENST00000339861 PEX6Q13608 980 aa11.46□□□□□ -0.57
SEMA4D-201ENST00000339861 CYTH1Q15438 398 aa11.46□□□□□ -0.57
SEMA4D-201ENST00000339861 ZPBP2Q6X784 338 aa11.46□□□□□ -0.57
SEMA4D-201ENST00000339861 LRRC74BQ6ZQY2 392 aa11.46□□□□□ -0.57
SEMA4D-201ENST00000339861 HDAC11Q96DB2 347 aa11.46□□□□□ -0.57
SEMA4D-201ENST00000339861 LGMNQ99538 433 aa11.46□□□□□ -0.57
SEMA4D-201ENST00000339861 ACTL7BQ9Y614 415 aa11.46□□□□□ -0.57
SEMA4D-201ENST00000339861 ACKR2O00590 384 aa11.46□□□□□ -0.58
SEMA4D-201ENST00000339861 TRUB2O95900 331 aaKnown RBP11.46□□□□□ -0.58
SEMA4D-201ENST00000339861 IVDP26440 423 aa11.46□□□□□ -0.58
SEMA4D-201ENST00000339861 PDCD2Q16342 344 aaPredicted RBP11.46□□□□□ -0.58
SEMA4D-201ENST00000339861 DBN1Q16643 649 aa11.46□□□□□ -0.58
SEMA4D-201ENST00000339861 TREML2Q5T2D2 321 aa11.46□□□□□ -0.58
SEMA4D-201ENST00000339861 EMC10Q5UCC4 262 aa11.46□□□□□ -0.58
SEMA4D-201ENST00000339861 TNS4Q8IZW8 715 aa11.46□□□□□ -0.58
SEMA4D-201ENST00000339861 COLGALT1Q8NBJ5 622 aa11.46□□□□□ -0.58
SEMA4D-201ENST00000339861 SNRNP25Q9BV90 132 aaKnown RBP11.46□□□□□ -0.58
SEMA4D-201ENST00000339861 PPCSQ9HAB8 311 aa11.46□□□□□ -0.58
SEMA4D-201ENST00000339861 ARHGEF3Q9NR81 526 aa11.46□□□□□ -0.58
SEMA4D-201ENST00000339861 PDGFCQ9NRA1 345 aa11.46□□□□□ -0.58
SEMA4D-201ENST00000339861 NOD1Q9Y239 953 aa11.46□□□□□ -0.58
SEMA4D-201ENST00000339861 AFG3L2Q9Y4W6 797 aa11.46□□□□□ -0.58
SEMA4D-201ENST00000339861 IL18RAPO95256 599 aa11.46□□□□□ -0.58
SEMA4D-201ENST00000339861 TFB1MQ8WVM0 346 aaKnown RBP11.46□□□□□ -0.58
SEMA4D-201ENST00000339861 RNPEPQ9H4A4 650 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms