RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 LNPEPQ9UIQ6 1025 aa12.89□□□□□ -0.35
RIOK3-201ENST00000339486 TRPC5Q9UL62 973 aaPredicted RBP12.89□□□□□ -0.35
RIOK3-201ENST00000339486 ASTN2O75129 1339 aaPredicted RBP12.88□□□□□ -0.35
RIOK3-201ENST00000339486 AKAP10O43572 662 aa12.88□□□□□ -0.35
RIOK3-201ENST00000339486 EDIL3O43854 480 aa12.88□□□□□ -0.35
RIOK3-201ENST00000339486 CSDE1O75534 798 aaKnown RBP12.88□□□□□ -0.35
RIOK3-201ENST00000339486 OAS1P00973 400 aaKnown RBP12.88□□□□□ -0.35
RIOK3-201ENST00000339486 POLBP06746 335 aa12.88□□□□□ -0.35
RIOK3-201ENST00000339486 VAV1P15498 845 aa12.88□□□□□ -0.35
RIOK3-201ENST00000339486 MMP8P22894 467 aa12.88□□□□□ -0.35
RIOK3-201ENST00000339486 RGS2P41220 211 aa12.88□□□□□ -0.35
RIOK3-201ENST00000339486 RDM1Q8NG50 284 aa12.88□□□□□ -0.35
RIOK3-201ENST00000339486 CNPY3Q9BT09 278 aa12.88□□□□□ -0.35
RIOK3-201ENST00000339486 CHRNA5P30532 468 aa12.88□□□□□ -0.35
RIOK3-201ENST00000339486 RAB27AP51159 221 aa12.88□□□□□ -0.35
RIOK3-201ENST00000339486 RTP1P59025 263 aa12.88□□□□□ -0.35
RIOK3-201ENST00000339486 PPIDQ08752 370 aaKnown RBP12.88□□□□□ -0.35
RIOK3-201ENST00000339486 PTP4A2Q12974 167 aa12.88□□□□□ -0.35
RIOK3-201ENST00000339486 PGM5Q15124 567 aa12.88□□□□□ -0.35
RIOK3-201ENST00000339486 BANPQ8N9N5 519 aa12.88□□□□□ -0.35
RIOK3-201ENST00000339486 DDI1Q8WTU0 396 aa12.88□□□□□ -0.35
RIOK3-201ENST00000339486 NKD2Q969F2 451 aaPredicted RBP12.88□□□□□ -0.35
RIOK3-201ENST00000339486 P2RX7Q99572 595 aaKnown RBP12.88□□□□□ -0.35
RIOK3-201ENST00000339486 WARS2Q9UGM6 360 aaKnown RBP12.88□□□□□ -0.35
RIOK3-201ENST00000339486 SLC39A10Q9ULF5 831 aa12.88□□□□□ -0.35
RIOK3-201ENST00000339486 PAIP2BQ9ULR5 123 aaKnown RBP12.88□□□□□ -0.35
RIOK3-201ENST00000339486 OGTO15294 1046 aa12.88□□□□□ -0.35
RIOK3-201ENST00000339486 TPST1O60507 370 aa12.88□□□□□ -0.35
RIOK3-201ENST00000339486 TMCC1O94876 653 aa12.88□□□□□ -0.35
RIOK3-201ENST00000339486 TCF4P15884 667 aa12.88□□□□□ -0.35
RIOK3-201ENST00000339486 ADSSP30520 456 aa12.88□□□□□ -0.35
RIOK3-201ENST00000339486 NCKAP1LP55160 1127 aa12.88□□□□□ -0.35
RIOK3-201ENST00000339486 MOGSQ13724 837 aa12.88□□□□□ -0.35
RIOK3-201ENST00000339486 USP10Q14694 798 aaKnown RBP12.88□□□□□ -0.35
RIOK3-201ENST00000339486 SIX1Q15475 284 aaPredicted RBP12.88□□□□□ -0.35
RIOK3-201ENST00000339486 SLC5A9Q2M3M2 681 aa12.88□□□□□ -0.35
RIOK3-201ENST00000339486 DENND1BQ6P3S1 775 aa12.88□□□□□ -0.35
RIOK3-201ENST00000339486 KLC3Q6P597 504 aa12.88□□□□□ -0.35
RIOK3-201ENST00000339486 SLC44A1Q8WWI5 657 aa12.88□□□□□ -0.35
RIOK3-201ENST00000339486 LPAR1Q92633 364 aa12.88□□□□□ -0.35
RIOK3-201ENST00000339486 SGF29Q96ES7 293 aa12.88□□□□□ -0.35
RIOK3-201ENST00000339486 CDRT15Q96T59 188 aa12.88□□□□□ -0.35
RIOK3-201ENST00000339486 COPS7BQ9H9Q2 264 aaPredicted RBP12.88□□□□□ -0.35
RIOK3-201ENST00000339486 MAN1C1Q9NR34 630 aa12.88□□□□□ -0.35
RIOK3-201ENST00000339486 PLIN4Q96Q06 1357 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 F8W8V4 182 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 HNRNPRO43390 633 aaKnown RBP12.87□□□□□ -0.35
RIOK3-201ENST00000339486 ITGB3P05106 788 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 FAM58BPP0C7Q3 252 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 PKNOX1P55347 436 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 GAD2Q05329 585 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 NME3Q13232 169 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 SLC44A4Q53GD3 710 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 CES3Q6UWW8 571 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 CXorf38Q8TB03 319 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 GFM2Q969S9 779 aaKnown RBP12.87□□□□□ -0.35
RIOK3-201ENST00000339486 SERAC1Q96JX3 654 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 TUBGCP5Q96RT8 1024 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 HERPUD2Q9BSE4 406 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 CEP41Q9BYV8 373 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 VPS33BQ9H267 617 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 ACAD9Q9H845 621 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 SDR42E2A6NKP2 422 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 MAFGO15525 162 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 MAGEC1O60732 1142 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 OATP04181 439 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 SERPINA6P08185 405 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 EEF1DP29692 281 aaKnown RBP12.87□□□□□ -0.35
RIOK3-201ENST00000339486 SOX11P35716 441 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 NAMPTP43490 491 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 KPNA2P52292 529 aaKnown RBP12.87□□□□□ -0.35
RIOK3-201ENST00000339486 RSBN1LQ6PCB5 846 aaPredicted RBP12.87□□□□□ -0.35
RIOK3-201ENST00000339486 RBM44Q6ZP01 1051 aaKnown RBP12.87□□□□□ -0.35
RIOK3-201ENST00000339486 FAM172AQ8WUF8 416 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 UTP4Q969X6 686 aaKnown RBP12.87□□□□□ -0.35
RIOK3-201ENST00000339486 C2orf40Q9H1Z8 148 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 MRPL40Q9NQ50 206 aaKnown RBP12.87□□□□□ -0.35
RIOK3-201ENST00000339486 TCF7L2Q9NQB0 619 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 PFDN4Q9NQP4 134 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 SNX13Q9Y5W8 968 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 SNX9Q9Y5X1 595 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 MYPNQ86TC9 1320 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 NUP188Q5SRE5 1749 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 RGL2O15211 777 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 PEX1O43933 1283 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 TGDSO95455 350 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 CFHP08603 1231 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 CHRM1P11229 460 aaPredicted RBP12.87□□□□□ -0.35
RIOK3-201ENST00000339486 IVDP26440 423 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 CAP2P40123 477 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 CDKN2BP42772 138 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 ALDH1A3P47895 512 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 GLRBP48167 497 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 GDF10P55107 478 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 CRADDP78560 199 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 CDC16Q13042 620 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 SNX32Q86XE0 403 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 SIX6OS1Q8N1H7 587 aa12.87□□□□□ -0.35
RIOK3-201ENST00000339486 ENDOVQ8N8Q3 282 aaKnown RBP12.87□□□□□ -0.35
RIOK3-201ENST00000339486 KYQ8NBH2 561 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms