RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 RDXP35241 583 aaKnown RBP17■□□□□ 0.31
LITAF-201ENST00000339430 ZNF143P52747 638 aaPredicted RBP17■□□□□ 0.31
LITAF-201ENST00000339430 E2F5Q15329 346 aa17■□□□□ 0.31
LITAF-201ENST00000339430 FAM187BQ17R55 369 aa17■□□□□ 0.31
LITAF-201ENST00000339430 SWT1Q5T5J6 900 aaKnown RBP17■□□□□ 0.31
LITAF-201ENST00000339430 HHATQ5VTY9 493 aa17■□□□□ 0.31
LITAF-201ENST00000339430 LVRNQ6Q4G3 990 aa17■□□□□ 0.31
LITAF-201ENST00000339430 ANKLE1Q8NAG6 615 aa17■□□□□ 0.31
LITAF-201ENST00000339430 OSMRQ99650 979 aa17■□□□□ 0.31
LITAF-201ENST00000339430 RSAD1Q9HA92 442 aa17■□□□□ 0.31
LITAF-201ENST00000339430 CYP3A43Q9HB55 503 aa17■□□□□ 0.31
LITAF-201ENST00000339430 RNF19AQ9NV58 838 aa17■□□□□ 0.31
LITAF-201ENST00000339430 BARX2Q9UMQ3 279 aaPredicted RBP17■□□□□ 0.31
LITAF-201ENST00000339430 SMG5Q9UPR3 1016 aaKnown RBP17■□□□□ 0.31
LITAF-201ENST00000339430 TYROBPO43914 113 aa17■□□□□ 0.31
LITAF-201ENST00000339430 NQO1P15559 274 aaKnown RBP17■□□□□ 0.31
LITAF-201ENST00000339430 C1QTNF8P60827 252 aa17■□□□□ 0.31
LITAF-201ENST00000339430 ROR1Q01973 937 aa17■□□□□ 0.31
LITAF-201ENST00000339430 LHX8Q68G74 356 aa17■□□□□ 0.31
LITAF-201ENST00000339430 GDF6Q6KF10 455 aaPredicted RBP17■□□□□ 0.31
LITAF-201ENST00000339430 CYP4V2Q6ZWL3 525 aaPredicted RBP17■□□□□ 0.31
LITAF-201ENST00000339430 IGDCC3Q8IVU1 814 aa17■□□□□ 0.31
LITAF-201ENST00000339430 PDIK1LQ8N165 341 aa17■□□□□ 0.31
LITAF-201ENST00000339430 LRRC8CQ8TDW0 803 aa17■□□□□ 0.31
LITAF-201ENST00000339430 KLHL29Q96CT2 875 aa17■□□□□ 0.31
LITAF-201ENST00000339430 KIF12Q96FN5 646 aa17■□□□□ 0.31
LITAF-201ENST00000339430 ACAP3Q96P50 834 aa17■□□□□ 0.31
LITAF-201ENST00000339430 FRMD8P1Q9BZ68 369 aaPredicted RBP17■□□□□ 0.31
LITAF-201ENST00000339430 C2CD4BA6NLJ0 364 aa16.99■□□□□ 0.31
LITAF-201ENST00000339430 H7C0C1 242 aa16.99■□□□□ 0.31
LITAF-201ENST00000339430 MYCP01106 439 aaPredicted RBP16.99■□□□□ 0.31
LITAF-201ENST00000339430 FGFR1P11362 822 aa16.99■□□□□ 0.31
LITAF-201ENST00000339430 ATP5OP48047 213 aa16.99■□□□□ 0.31
LITAF-201ENST00000339430 CDC42EP1Q00587 391 aa16.99■□□□□ 0.31
LITAF-201ENST00000339430 GOLGA7BQ2TAP0 167 aa16.99■□□□□ 0.31
LITAF-201ENST00000339430 TBC1D31Q96DN5 1066 aa16.99■□□□□ 0.31
LITAF-201ENST00000339430 CNPY3Q9BT09 278 aa16.99■□□□□ 0.31
LITAF-201ENST00000339430 VRTNQ9H8Y1 702 aa16.99■□□□□ 0.31
LITAF-201ENST00000339430 NOD2Q9HC29 1040 aa16.99■□□□□ 0.31
LITAF-201ENST00000339430 NGRNQ9NPE2 291 aaKnown RBP16.99■□□□□ 0.31
LITAF-201ENST00000339430 FAM49BQ9NUQ9 324 aa16.99■□□□□ 0.31
LITAF-201ENST00000339430 SENP1Q9P0U3 644 aa16.99■□□□□ 0.31
LITAF-201ENST00000339430 ZMYND8Q9ULU4 1186 aaPredicted RBP16.99■□□□□ 0.31
LITAF-201ENST00000339430 CFAP73A6NFT4 308 aa16.99■□□□□ 0.31
LITAF-201ENST00000339430 PRPSAP2O60256 369 aa16.99■□□□□ 0.31
LITAF-201ENST00000339430 TSPAN1O60635 241 aa16.99■□□□□ 0.31
LITAF-201ENST00000339430 AVILO75366 819 aa16.99■□□□□ 0.31
LITAF-201ENST00000339430 PFKMP08237 780 aa16.99■□□□□ 0.31
LITAF-201ENST00000339430 ACLYP53396 1101 aa16.99■□□□□ 0.31
LITAF-201ENST00000339430 KRT81Q14533 505 aa16.99■□□□□ 0.31
LITAF-201ENST00000339430 PDK4Q16654 411 aa16.99■□□□□ 0.31
LITAF-201ENST00000339430 ZC3H12AQ5D1E8 599 aaKnown RBP16.99■□□□□ 0.31
LITAF-201ENST00000339430 PPP1R26Q5T8A7 1209 aaPredicted RBP16.99■□□□□ 0.31
LITAF-201ENST00000339430 RNF43Q68DV7 783 aa16.99■□□□□ 0.31
LITAF-201ENST00000339430 GBP7Q8N8V2 638 aaPredicted RBP16.99■□□□□ 0.31
LITAF-201ENST00000339430 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.99■□□□□ 0.31
LITAF-201ENST00000339430 GRAMD1AQ96CP6 724 aa16.99■□□□□ 0.31
LITAF-201ENST00000339430 PLCD4Q9BRC7 762 aa16.99■□□□□ 0.31
LITAF-201ENST00000339430 GCOM2Q9BZD3 368 aaPredicted RBP16.99■□□□□ 0.31
LITAF-201ENST00000339430 STK38LQ9Y2H1 464 aa16.99■□□□□ 0.31
LITAF-201ENST00000339430 HEY1Q9Y5J3 304 aa16.99■□□□□ 0.31
LITAF-201ENST00000339430 PPEF2O14830 753 aa16.98■□□□□ 0.31
LITAF-201ENST00000339430 PCK1P35558 622 aa16.98■□□□□ 0.31
LITAF-201ENST00000339430 ELK3P41970 407 aa16.98■□□□□ 0.31
LITAF-201ENST00000339430 MSH2P43246 934 aa16.98■□□□□ 0.31
LITAF-201ENST00000339430 RBP5P82980 135 aa16.98■□□□□ 0.31
LITAF-201ENST00000339430 RNASELQ05823 741 aaKnown RBP16.98■□□□□ 0.31
LITAF-201ENST00000339430 ACOT1Q86TX2 421 aa16.98■□□□□ 0.31
LITAF-201ENST00000339430 LPIN3Q9BQK8 851 aa16.98■□□□□ 0.31
LITAF-201ENST00000339430 NT5C1AQ9BXI3 368 aa16.98■□□□□ 0.31
LITAF-201ENST00000339430 ACSS3Q9H6R3 686 aa16.98■□□□□ 0.31
LITAF-201ENST00000339430 E7ESA3 106 aa16.97■□□□□ 0.31
LITAF-201ENST00000339430 KRT16P08779 473 aa16.97■□□□□ 0.31
LITAF-201ENST00000339430 ADRA1DP25100 572 aa16.97■□□□□ 0.31
LITAF-201ENST00000339430 GBP2P32456 591 aaPredicted RBP16.97■□□□□ 0.31
LITAF-201ENST00000339430 INCA1Q0VD86 236 aa16.97■□□□□ 0.31
LITAF-201ENST00000339430 ACAP1Q15027 740 aa16.97■□□□□ 0.31
LITAF-201ENST00000339430 NOMO1Q15155 1222 aa16.97■□□□□ 0.31
LITAF-201ENST00000339430 FAXCQ5TGI0 409 aa16.97■□□□□ 0.31
LITAF-201ENST00000339430 PMF1Q6P1K2 205 aa16.97■□□□□ 0.31
LITAF-201ENST00000339430 TAF2Q6P1X5 1199 aa16.97■□□□□ 0.31
LITAF-201ENST00000339430 ADGRD1Q6QNK2 874 aa16.97■□□□□ 0.31
LITAF-201ENST00000339430 MRPL45Q9BRJ2 306 aaKnown RBP16.97■□□□□ 0.31
LITAF-201ENST00000339430 MYLK2Q9H1R3 596 aa16.97■□□□□ 0.31
LITAF-201ENST00000339430 ITGA11Q9UKX5 1188 aa16.97■□□□□ 0.31
LITAF-201ENST00000339430 STARD13Q9Y3M8 1113 aa16.97■□□□□ 0.31
LITAF-201ENST00000339430 A8MUI8 341 aa16.97■□□□□ 0.31
LITAF-201ENST00000339430 KLHL38Q2WGJ6 581 aa16.97■□□□□ 0.31
LITAF-201ENST00000339430 CCDC14Q49A88 953 aa16.97■□□□□ 0.31
LITAF-201ENST00000339430 LCLAT1Q6UWP7 414 aa16.97■□□□□ 0.31
LITAF-201ENST00000339430 SCUBE3Q8IX30 993 aa16.97■□□□□ 0.31
LITAF-201ENST00000339430 DCAKDQ8WVC6 231 aa16.97■□□□□ 0.31
LITAF-201ENST00000339430 TMEM40Q8WWA1 233 aa16.97■□□□□ 0.31
LITAF-201ENST00000339430 FAXDC2Q96IV6 333 aa16.97■□□□□ 0.31
LITAF-201ENST00000339430 ALG13Q9NP73 1137 aaKnown RBP16.97■□□□□ 0.31
LITAF-201ENST00000339430 SNX9Q9Y5X1 595 aa16.97■□□□□ 0.31
LITAF-201ENST00000339430 KBTBD13C9JR72 458 aa16.96■□□□□ 0.31
LITAF-201ENST00000339430 KCNN4O15554 427 aa16.96■□□□□ 0.31
LITAF-201ENST00000339430 DARSP14868 501 aaKnown RBP16.96■□□□□ 0.31
LITAF-201ENST00000339430 SEPT7Q16181 437 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms