RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 NUDCD2Q8WVJ2 157 aa3.08□□□□□ -1.92
XRCC4-202ENST00000338635 KBTBD7Q8WVZ9 684 aa3.08□□□□□ -1.92
XRCC4-202ENST00000338635 HSPBAP1Q96EW2 488 aa3.08□□□□□ -1.92
XRCC4-202ENST00000338635 WDYHV1Q96HA8 205 aa3.08□□□□□ -1.92
XRCC4-202ENST00000338635 NTPCRQ9BSD7 190 aaKnown RBP3.08□□□□□ -1.92
XRCC4-202ENST00000338635 TM2D2Q9BX73 214 aa3.08□□□□□ -1.92
XRCC4-202ENST00000338635 ASAP1Q9ULH1 1129 aa3.08□□□□□ -1.92
XRCC4-202ENST00000338635 WASHC2CQ9Y4E1 1318 aa3.08□□□□□ -1.92
XRCC4-202ENST00000338635 A0A088AWK7 358 aa3.08□□□□□ -1.92
XRCC4-202ENST00000338635 TMEM272A0A1B0GTI8 110 aa3.08□□□□□ -1.92
XRCC4-202ENST00000338635 EXOC5O00471 708 aa3.08□□□□□ -1.92
XRCC4-202ENST00000338635 SRGAP2O75044 1071 aa3.08□□□□□ -1.92
XRCC4-202ENST00000338635 IGSF3O75054 1194 aa3.08□□□□□ -1.92
XRCC4-202ENST00000338635 RASAL1O95294 804 aa3.08□□□□□ -1.92
XRCC4-202ENST00000338635 PLAUP00749 431 aa3.08□□□□□ -1.92
XRCC4-202ENST00000338635 IGKV3-20P01619 116 aa3.08□□□□□ -1.92
XRCC4-202ENST00000338635 AKAP5P24588 427 aa3.08□□□□□ -1.92
XRCC4-202ENST00000338635 ARRB2P32121 409 aa3.08□□□□□ -1.92
XRCC4-202ENST00000338635 MCM5P33992 734 aa3.08□□□□□ -1.92
XRCC4-202ENST00000338635 ARFIP2P53365 341 aa3.08□□□□□ -1.92
XRCC4-202ENST00000338635 DEUP1Q05D60 604 aa3.08□□□□□ -1.92
XRCC4-202ENST00000338635 NFATC4Q14934 902 aa3.08□□□□□ -1.92
XRCC4-202ENST00000338635 KPNB1Q14974 876 aaKnown RBP3.08□□□□□ -1.92
XRCC4-202ENST00000338635 GFI1BQ5VTD9 330 aa3.08□□□□□ -1.92
XRCC4-202ENST00000338635 EGFLAMQ63HQ2 1017 aa3.08□□□□□ -1.92
XRCC4-202ENST00000338635 PDXDC1Q6P996 788 aa3.08□□□□□ -1.92
XRCC4-202ENST00000338635 BCAS4Q8TDM0 211 aa3.08□□□□□ -1.92
XRCC4-202ENST00000338635 MAP3K14Q99558 947 aa3.08□□□□□ -1.92
XRCC4-202ENST00000338635 TRIM54Q9BYV2 358 aa3.08□□□□□ -1.92
XRCC4-202ENST00000338635 ARHGAP39Q9C0H5 1083 aa3.08□□□□□ -1.92
XRCC4-202ENST00000338635 NUAK2Q9H093 628 aa3.08□□□□□ -1.92
XRCC4-202ENST00000338635 MYLK2Q9H1R3 596 aa3.08□□□□□ -1.92
XRCC4-202ENST00000338635 USP29Q9HBJ7 922 aa3.08□□□□□ -1.92
XRCC4-202ENST00000338635 TRIM36Q9NQ86 728 aa3.08□□□□□ -1.92
XRCC4-202ENST00000338635 XPNPEP3Q9NQH7 507 aa3.08□□□□□ -1.92
XRCC4-202ENST00000338635 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.08□□□□□ -1.92
XRCC4-202ENST00000338635 SIRT4Q9Y6E7 314 aaPredicted RBP3.08□□□□□ -1.92
XRCC4-202ENST00000338635 CDY1Q9Y6F8 540 aa3.08□□□□□ -1.92
XRCC4-202ENST00000338635 RRHO14718 337 aa3.07□□□□□ -1.92
XRCC4-202ENST00000338635 ACOT8O14734 319 aa3.07□□□□□ -1.92
XRCC4-202ENST00000338635 TLX3O43711 291 aaPredicted RBP3.07□□□□□ -1.92
XRCC4-202ENST00000338635 TBC1D4O60343 1298 aa3.07□□□□□ -1.92
XRCC4-202ENST00000338635 EVA1CP58658 441 aa3.07□□□□□ -1.92
XRCC4-202ENST00000338635 PPATQ06203 517 aa3.07□□□□□ -1.92
XRCC4-202ENST00000338635 CACHD1Q5VU97 1274 aa3.07□□□□□ -1.92
XRCC4-202ENST00000338635 ZDHHC24Q6UX98 284 aa3.07□□□□□ -1.92
XRCC4-202ENST00000338635 KCTD20Q7Z5Y7 419 aa3.07□□□□□ -1.92
XRCC4-202ENST00000338635 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.07□□□□□ -1.92
XRCC4-202ENST00000338635 CUZD1Q86UP6 607 aa3.07□□□□□ -1.92
XRCC4-202ENST00000338635 NR2C2APQ86WQ0 139 aa3.07□□□□□ -1.92
XRCC4-202ENST00000338635 GRAMD1CQ8IYS0 662 aa3.07□□□□□ -1.92
XRCC4-202ENST00000338635 FBXL14Q8N1E6 418 aa3.07□□□□□ -1.92
XRCC4-202ENST00000338635 TMEM199Q8N511 208 aa3.07□□□□□ -1.92
XRCC4-202ENST00000338635 IQCF1Q8N6M8 205 aa3.07□□□□□ -1.92
XRCC4-202ENST00000338635 OR6B3Q8NGW1 331 aa3.07□□□□□ -1.92
XRCC4-202ENST00000338635 HPS3Q969F9 1004 aa3.07□□□□□ -1.92
XRCC4-202ENST00000338635 SMAD5Q99717 465 aaKnown RBP3.07□□□□□ -1.92
XRCC4-202ENST00000338635 TUBB6Q9BUF5 446 aa3.07□□□□□ -1.92
XRCC4-202ENST00000338635 MLXIPLQ9NP71 852 aa3.07□□□□□ -1.92
XRCC4-202ENST00000338635 NKX1-2Q9UD57 310 aaPredicted RBP3.07□□□□□ -1.92
XRCC4-202ENST00000338635 FZD4Q9ULV1 537 aa3.07□□□□□ -1.92
XRCC4-202ENST00000338635 A0A1W2PPC1 479 aa3.06□□□□□ -1.92
XRCC4-202ENST00000338635 PRSS47A8MTI9 375 aa3.06□□□□□ -1.92
XRCC4-202ENST00000338635 ALG1L2C9J202 215 aa3.06□□□□□ -1.92
XRCC4-202ENST00000338635 CD3EAPO15446 510 aaKnown RBP3.06□□□□□ -1.92
XRCC4-202ENST00000338635 ZC3H11AO75152 810 aaKnown RBP eCLIP3.06□□□□□ -1.92
XRCC4-202ENST00000338635 FGF3P11487 239 aaPredicted RBP3.06□□□□□ -1.92
XRCC4-202ENST00000338635 HOXB2P14652 356 aa3.06□□□□□ -1.92
XRCC4-202ENST00000338635 NPR1P16066 1061 aa3.06□□□□□ -1.92
XRCC4-202ENST00000338635 GATMP50440 423 aa3.06□□□□□ -1.92
XRCC4-202ENST00000338635 P2RX3P56373 397 aa3.06□□□□□ -1.92
XRCC4-202ENST00000338635 RAB1AP62820 205 aa3.06□□□□□ -1.92
XRCC4-202ENST00000338635 GPC5P78333 572 aa3.06□□□□□ -1.92
XRCC4-202ENST00000338635 TIAL1Q01085 375 aaKnown RBP eCLIP3.06□□□□□ -1.92
XRCC4-202ENST00000338635 SLC13A2Q13183 592 aa3.06□□□□□ -1.92
XRCC4-202ENST00000338635 PTGR1Q14914 329 aa3.06□□□□□ -1.92
XRCC4-202ENST00000338635 INSCQ1MX18 579 aa3.06□□□□□ -1.92
XRCC4-202ENST00000338635 TMEM240Q5SV17 173 aa3.06□□□□□ -1.92
XRCC4-202ENST00000338635 TMPRSS12Q86WS5 348 aa3.06□□□□□ -1.92
XRCC4-202ENST00000338635 COL23A1Q86Y22 540 aaPredicted RBP3.06□□□□□ -1.92
XRCC4-202ENST00000338635 PNPLA1Q8N8W4 532 aa3.06□□□□□ -1.92
XRCC4-202ENST00000338635 PRPF38AQ8NAV1 312 aaKnown RBP3.06□□□□□ -1.92
XRCC4-202ENST00000338635 JPH3Q8WXH2 748 aaPredicted RBP3.06□□□□□ -1.92
XRCC4-202ENST00000338635 NEUROG1Q92886 237 aa3.06□□□□□ -1.92
XRCC4-202ENST00000338635 ATP2A3Q93084 1043 aa3.06□□□□□ -1.92
XRCC4-202ENST00000338635 C1GALT1C1Q96EU7 318 aa3.06□□□□□ -1.92
XRCC4-202ENST00000338635 DPH1Q9BZG8 443 aa3.06□□□□□ -1.92
XRCC4-202ENST00000338635 AGO4Q9HCK5 861 aaKnown RBP3.06□□□□□ -1.92
XRCC4-202ENST00000338635 ARL8BQ9NVJ2 186 aa3.06□□□□□ -1.92
XRCC4-202ENST00000338635 MSRB1Q9NZV6 116 aa3.06□□□□□ -1.92
XRCC4-202ENST00000338635 DNMT3BQ9UBC3 853 aaKnown RBP3.06□□□□□ -1.92
XRCC4-202ENST00000338635 PCDHA12Q9UN75 941 aa3.06□□□□□ -1.92
XRCC4-202ENST00000338635 USP12O75317 370 aa3.05□□□□□ -1.92
XRCC4-202ENST00000338635 HGFP14210 728 aa3.05□□□□□ -1.92
XRCC4-202ENST00000338635 CD19P15391 556 aa3.05□□□□□ -1.92
XRCC4-202ENST00000338635 TBXAS1P24557 533 aaPredicted RBP3.05□□□□□ -1.92
XRCC4-202ENST00000338635 POLD2P49005 469 aa3.05□□□□□ -1.92
XRCC4-202ENST00000338635 RAB32Q13637 225 aa3.05□□□□□ -1.92
XRCC4-202ENST00000338635 SPATA2LQ8IUW3 424 aaPredicted RBP3.05□□□□□ -1.92
XRCC4-202ENST00000338635 FOXP4Q8IVH2 680 aaPredicted RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms