RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 EIF4A3P38919 411 aaKnown RBP12.48□□□□□ -0.41
SPTLC1-202ENST00000337841 SLC7A9P82251 487 aa12.48□□□□□ -0.41
SPTLC1-202ENST00000337841 CDK17Q00537 523 aa12.48□□□□□ -0.41
SPTLC1-202ENST00000337841 CENPCQ03188 943 aa12.48□□□□□ -0.41
SPTLC1-202ENST00000337841 GOLGA8FQ08AF8 430 aa12.48□□□□□ -0.41
SPTLC1-202ENST00000337841 GOLGA8DPQ0D2H9 430 aa12.48□□□□□ -0.41
SPTLC1-202ENST00000337841 GSE1Q14687 1217 aa12.48□□□□□ -0.41
SPTLC1-202ENST00000337841 PTPN20Q4JDL3 420 aa12.48□□□□□ -0.41
SPTLC1-202ENST00000337841 KLHDC10Q6PID8 442 aa12.48□□□□□ -0.41
SPTLC1-202ENST00000337841 MMS22LQ6ZRQ5 1243 aa12.48□□□□□ -0.41
SPTLC1-202ENST00000337841 BEND5Q7L4P6 421 aa12.48□□□□□ -0.41
SPTLC1-202ENST00000337841 GJD3Q8N144 294 aa12.48□□□□□ -0.41
SPTLC1-202ENST00000337841 TC2NQ8N9U0 490 aa12.48□□□□□ -0.41
SPTLC1-202ENST00000337841 SPC24Q8NBT2 197 aa12.48□□□□□ -0.41
SPTLC1-202ENST00000337841 ELSPBP1Q96BH3 223 aa12.48□□□□□ -0.41
SPTLC1-202ENST00000337841 CCDC42Q96M95 316 aa12.48□□□□□ -0.41
SPTLC1-202ENST00000337841 PANX2Q96RD6 677 aa12.48□□□□□ -0.41
SPTLC1-202ENST00000337841 RNF38Q9H0F5 515 aa12.48□□□□□ -0.41
SPTLC1-202ENST00000337841 CCSER2Q9H7U1 834 aa12.48□□□□□ -0.41
SPTLC1-202ENST00000337841 KIF9Q9HAQ2 790 aa12.48□□□□□ -0.41
SPTLC1-202ENST00000337841 ASNSD1Q9NWL6 643 aa12.48□□□□□ -0.41
SPTLC1-202ENST00000337841 THG1LQ9NWX6 298 aaKnown RBP12.48□□□□□ -0.41
SPTLC1-202ENST00000337841 OBP2AQ9NY56 170 aa12.48□□□□□ -0.41
SPTLC1-202ENST00000337841 ARHGAP20Q9P2F6 1191 aa12.48□□□□□ -0.41
SPTLC1-202ENST00000337841 SSU72P8A0A1W2PR75 194 aa12.47□□□□□ -0.41
SPTLC1-202ENST00000337841 TMCO5BA8MYB1 307 aa12.47□□□□□ -0.41
SPTLC1-202ENST00000337841 ANHXE9PGG2 379 aa12.47□□□□□ -0.41
SPTLC1-202ENST00000337841 AKR1B10O60218 316 aa12.47□□□□□ -0.41
SPTLC1-202ENST00000337841 FTLP02792 175 aaPredicted RBP12.47□□□□□ -0.41
SPTLC1-202ENST00000337841 SCNN1AP37088 669 aa12.47□□□□□ -0.41
SPTLC1-202ENST00000337841 VIPR2P41587 438 aa12.47□□□□□ -0.41
SPTLC1-202ENST00000337841 PGFP49763 221 aa12.47□□□□□ -0.41
SPTLC1-202ENST00000337841 COG7P83436 770 aa12.47□□□□□ -0.41
SPTLC1-202ENST00000337841 CCDC122Q5T0U0 273 aa12.47□□□□□ -0.41
SPTLC1-202ENST00000337841 TANGO2Q6ICL3 276 aa12.47□□□□□ -0.41
SPTLC1-202ENST00000337841 WDR59Q6PJI9 974 aa12.47□□□□□ -0.41
SPTLC1-202ENST00000337841 PARM1Q6UWI2 310 aa12.47□□□□□ -0.41
SPTLC1-202ENST00000337841 FAM183BPQ6ZVS7 135 aa12.47□□□□□ -0.41
SPTLC1-202ENST00000337841 DDX42Q86XP3 938 aaKnown RBP eCLIP12.47□□□□□ -0.41
SPTLC1-202ENST00000337841 YAF2Q8IY57 180 aa12.47□□□□□ -0.41
SPTLC1-202ENST00000337841 MCOLN2Q8IZK6 566 aa12.47□□□□□ -0.41
SPTLC1-202ENST00000337841 ADAMTS19Q8TE59 1207 aa12.47□□□□□ -0.41
SPTLC1-202ENST00000337841 CLEC4CQ8WTT0 213 aa12.47□□□□□ -0.41
SPTLC1-202ENST00000337841 EDEM1Q92611 657 aa12.47□□□□□ -0.41
SPTLC1-202ENST00000337841 TRIM11Q96F44 468 aa12.47□□□□□ -0.41
SPTLC1-202ENST00000337841 C11orf70Q9BRQ4 267 aa12.47□□□□□ -0.41
SPTLC1-202ENST00000337841 KCNK12Q9HB15 430 aa12.47□□□□□ -0.41
SPTLC1-202ENST00000337841 POPDC2Q9HBU9 364 aa12.47□□□□□ -0.41
SPTLC1-202ENST00000337841 OSER1Q9NX31 292 aa12.47□□□□□ -0.41
SPTLC1-202ENST00000337841 ARHGAP26Q9UNA1 814 aa12.47□□□□□ -0.41
SPTLC1-202ENST00000337841 HEPACAM2A8MVW5 462 aa12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 GOLGA8SH3BPF8 625 aa12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 HSF2BPO75031 334 aa12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 SLC34A2O95436 690 aa12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 OLFM2O95897 454 aa12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 TBX18O95935 607 aa12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 PLEKP08567 350 aaPredicted RBP12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 NCAM1P13591 858 aa12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 KPNA1P52294 538 aaPredicted RBP12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 GSDMDP57764 484 aa12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 RNASE9P60153 205 aaKnown RBP12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 EFEMP1Q12805 493 aa12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 HTR4Q13639 388 aa12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 FAM102AQ5T9C2 384 aaPredicted RBP12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 CC2D1AQ6P1N0 951 aaPredicted RBP12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 ALKBH5Q6P6C2 394 aaKnown RBP12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 OLFML1Q6UWY5 402 aa12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 HFE2Q6ZVN8 426 aa12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 SLC26A9Q7LBE3 791 aa12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 BHLHA9Q7RTU4 235 aa12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 XYLT1Q86Y38 959 aa12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 TMTC1Q8IUR5 882 aa12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 MFSD6LQ8IWD5 586 aa12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 SLC44A3Q8N4M1 653 aa12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 DEPDC1BQ8WUY9 529 aa12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 USP13Q92995 863 aaPredicted RBP12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 SLC22A12Q96S37 553 aa12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 CHP1Q99653 195 aa12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 SMG9Q9H0W8 520 aaKnown RBP12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 ISCUQ9H1K1 167 aa12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 NHEJ1Q9H9Q4 299 aaPredicted RBP12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 TMEM51Q9NW97 253 aa12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 RRN3Q9NYV6 651 aa12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 MARCH2Q9P0N8 246 aa12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 TJP2Q9UDY2 1190 aa12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 RASAL2Q9UJF2 1139 aa12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 NUDT5Q9UKK9 219 aa12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 CPQQ9Y646 472 aa12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 NUMBLQ9Y6R0 609 aa12.46□□□□□ -0.41
SPTLC1-202ENST00000337841 BRWD1Q9NSI6 2320 aa12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 CDH23Q9H251 3354 aa12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 A0A087X0T9 212 aa12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 SLC12A8A0AV02 714 aa12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 FAM170AA1A519 330 aa12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 ANKRD62A6NC57 917 aa12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 FAM228BP0C875 321 aa12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 MYBL1P10243 752 aa12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 KRT3P12035 628 aa12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 TCF3P15923 654 aa12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 PSMC3P17980 439 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms