RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 MSLNQ13421 630 aaPredicted RBP5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 GOLGA7BQ2TAP0 167 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 BRMS1LQ5PSV4 323 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 DNAJC24Q6P3W2 148 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 TIFABQ6ZNK6 161 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 CATSPER4Q7RTX7 472 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 SERPINB12Q96P63 405 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 RXFP1Q9HBX9 757 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 PRM3Q9NNZ6 103 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 PRDM5Q9NQX1 630 aaPredicted RBP5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 CLIC5Q9NZA1 410 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 IGSF9Q9P2J2 1179 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 AMACRQ9UHK6 382 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 GOLGA6L10A0A0M3HER8 536 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 PRPF4O43172 522 aaKnown RBP eCLIP5.61□□□□□ -1.511e-6■■□□□ 11.8
PRPF4B-201ENST00000337659 RIPK2O43353 540 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 HOXA2O43364 376 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 ABLIM3O94929 683 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 INHAP05111 366 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 MYL3P08590 195 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 TCF4P15884 667 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 PRKCHP24723 683 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 DNAJB2P25686 324 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 STIP1P31948 543 aaKnown RBP5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 ADCY2Q08462 1091 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 ZNF618Q5T7W0 954 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 VSTM1Q6UX27 236 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 NLRP14Q86W24 1093 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 LENG1Q96BZ8 264 aaPredicted RBP5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 SUGCTQ9HAC7 445 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 PUF60Q9UHX1 559 aaKnown RBP5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 RASAL2Q9UJF2 1139 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 FBXW11Q9UKB1 542 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 MTUS1Q9ULD2 1270 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 R3HDM2Q9Y2K5 976 aaKnown RBP5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 HTTP42858 3142 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 VGLL3A8MV65 326 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 EFCAB14O75071 495 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 THP07101 528 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 ODC1P11926 461 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 KRT3P12035 628 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 IRX5P78411 483 aaPredicted RBP5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 IFI35P80217 286 aaPredicted RBP5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 BEX3Q00994 111 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 GALNT2Q10471 571 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 DNTTIP2Q5QJE6 756 aaKnown RBP5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 LMBRD2Q68DH5 695 aaPredicted RBP5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 NCBP2-AS2Q69YL0 99 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 CCDC137Q6PK04 289 aaKnown RBP5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 FAM35AQ86V20 835 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 APPL2Q8NEU8 664 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 SMARCD1Q96GM5 515 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 DPEP3Q9H4B8 488 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 VPS18Q9P253 973 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 PACSIN2Q9UNF0 486 aaPredicted RBP5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 CEP83Q9Y592 693 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 NOTCH4Q99466 2003 aa5.61□□□□□ -1.51
PRPF4B-201ENST00000337659 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 C5orf67F2Z3F1 127 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 I6L893 689 aaPredicted RBP5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 PEX11BO96011 259 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 MIPP30301 263 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 RAP1GAPP47736 663 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 SMC1AQ14683 1233 aaKnown RBP5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 TXNRD3NBQ6F5E7 133 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 YTHDF3Q7Z739 585 aaKnown RBP5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 RAPGEF5Q92565 580 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 HDAC11Q96DB2 347 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 TTC25Q96NG3 672 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 ZIM3Q96PE6 472 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 KRT12Q99456 494 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 SPC25Q9HBM1 224 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 TJP2Q9UDY2 1190 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 USP18Q9UMW8 372 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 TEX264Q9Y6I9 313 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 E5RJQ4 531 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 F8VP50 259 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 TTI1O43156 1089 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 SPAG6O75602 509 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 WISP3O95389 354 aaPredicted RBP5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 TFAMQ00059 246 aaKnown RBP5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 SEZ6Q53EL9 994 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 ANKRD20A8PQ5CZ79 823 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 CFAP58Q5T655 872 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 TMCO4Q5TGY1 634 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 FAM91A1Q658Y4 838 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 CCDC70Q6NSX1 233 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 MFSD7Q6UXD7 560 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 CMTR2Q8IYT2 770 aaKnown RBP5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 OR6Y1Q8NGX8 325 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 DENND1AQ8TEH3 1009 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 VOPP1Q96AW1 172 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 PIWIL1Q96J94 861 aaKnown RBP5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 MCEEQ96PE7 176 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 PRKAG3Q9UGI9 489 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 ENPP3O14638 875 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 NCAM2O15394 837 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 ATMINO43313 823 aaPredicted RBP5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 GREM1O60565 184 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 CYP2B6P20813 491 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms