RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 TCEAL5Q5H9L2 206 aa22.51■■□□□ 1.19
TPM1-204ENST00000334895 OTUD1Q5VV17 481 aaPredicted RBP22.51■■□□□ 1.19
TPM1-204ENST00000334895 DAB2IPQ5VWQ8 1189 aa22.51■■□□□ 1.19
TPM1-204ENST00000334895 MON1AQ86VX9 555 aa22.51■■□□□ 1.19
TPM1-204ENST00000334895 SLC35F6Q8N357 371 aa22.51■■□□□ 1.19
TPM1-204ENST00000334895 EDEM1Q92611 657 aa22.51■■□□□ 1.19
TPM1-204ENST00000334895 CFAP57Q96MR6 1250 aa22.51■■□□□ 1.19
TPM1-204ENST00000334895 CDCA3Q99618 268 aaPredicted RBP22.51■■□□□ 1.19
TPM1-204ENST00000334895 DDX23Q9BUQ8 820 aaKnown RBP22.51■■□□□ 1.19
TPM1-204ENST00000334895 LRRC3Q9BY71 257 aa22.51■■□□□ 1.19
TPM1-204ENST00000334895 IP6K2Q9UHH9 426 aa22.51■■□□□ 1.19
TPM1-204ENST00000334895 HYOU1Q9Y4L1 999 aa22.51■■□□□ 1.19
TPM1-204ENST00000334895 ASB3Q9Y575 518 aa22.51■■□□□ 1.19
TPM1-204ENST00000334895 MTCH2Q9Y6C9 303 aa22.51■■□□□ 1.19
TPM1-204ENST00000334895 TADA3O75528 432 aa22.5■■□□□ 1.19
TPM1-204ENST00000334895 PSMA2P25787 234 aa22.5■■□□□ 1.19
TPM1-204ENST00000334895 MATKP42679 507 aa22.5■■□□□ 1.19
TPM1-204ENST00000334895 GNG11P61952 73 aa22.5■■□□□ 1.19
TPM1-204ENST00000334895 HYAL1Q12794 435 aa22.5■■□□□ 1.19
TPM1-204ENST00000334895 SH3PXD2AQ5TCZ1 1133 aa22.5■■□□□ 1.19
TPM1-204ENST00000334895 DAAM2Q86T65 1068 aa22.5■■□□□ 1.19
TPM1-204ENST00000334895 ITIH5Q86UX2 942 aa22.5■■□□□ 1.19
TPM1-204ENST00000334895 TMC8Q8IU68 726 aa22.5■■□□□ 1.19
TPM1-204ENST00000334895 ARFGAP1Q8N6T3 406 aa22.5■■□□□ 1.19
TPM1-204ENST00000334895 NIPA2Q8N8Q9 360 aa22.5■■□□□ 1.19
TPM1-204ENST00000334895 TRIM58Q8NG06 486 aa22.5■■□□□ 1.19
TPM1-204ENST00000334895 IL21Q9HBE4 155 aa22.5■■□□□ 1.19
TPM1-204ENST00000334895 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.5■■□□□ 1.19
TPM1-204ENST00000334895 ALG6Q9Y672 507 aa22.5■■□□□ 1.19
TPM1-204ENST00000334895 COL6A3P12111 3177 aa22.5■■□□□ 1.19
TPM1-204ENST00000334895 OBSL1O75147 1896 aa22.5■■□□□ 1.19
TPM1-204ENST00000334895 DOCK6Q96HP0 2047 aa22.5■■□□□ 1.19
TPM1-204ENST00000334895 HOXA9P31269 272 aa22.49■■□□□ 1.19
TPM1-204ENST00000334895 C15orf59Q2T9L4 293 aaPredicted RBP22.49■■□□□ 1.19
TPM1-204ENST00000334895 RAB6CQ53S08 254 aa22.49■■□□□ 1.19
TPM1-204ENST00000334895 DCAF6Q58WW2 860 aa22.49■■□□□ 1.19
TPM1-204ENST00000334895 BEND5Q7L4P6 421 aa22.49■■□□□ 1.19
TPM1-204ENST00000334895 TMEM150AQ86TG1 271 aa22.49■■□□□ 1.19
TPM1-204ENST00000334895 NT5C3BQ969T7 300 aa22.49■■□□□ 1.19
TPM1-204ENST00000334895 SLITRK1Q96PX8 696 aa22.49■■□□□ 1.19
TPM1-204ENST00000334895 ALS2CR12Q96Q35 445 aa22.49■■□□□ 1.19
TPM1-204ENST00000334895 RAB6CQ9H0N0 254 aa22.49■■□□□ 1.19
TPM1-204ENST00000334895 EHD2Q9NZN4 543 aa22.49■■□□□ 1.19
TPM1-204ENST00000334895 LMCD1Q9NZU5 365 aa22.49■■□□□ 1.19
TPM1-204ENST00000334895 CALCOCO1Q9P1Z2 691 aa22.49■■□□□ 1.19
TPM1-204ENST00000334895 GLP2RO95838 553 aa22.49■■□□□ 1.19
TPM1-204ENST00000334895 FTCDO95954 541 aa22.49■■□□□ 1.19
TPM1-204ENST00000334895 NCAM1P13591 858 aa22.49■■□□□ 1.19
TPM1-204ENST00000334895 NOS2P35228 1153 aa22.49■■□□□ 1.19
TPM1-204ENST00000334895 PTPN9P43378 593 aa22.49■■□□□ 1.19
TPM1-204ENST00000334895 ETF1P62495 437 aaKnown RBP22.49■■□□□ 1.19
TPM1-204ENST00000334895 HS6ST3Q8IZP7 471 aa22.49■■□□□ 1.19
TPM1-204ENST00000334895 MICALL1Q8N3F8 863 aa22.49■■□□□ 1.19
TPM1-204ENST00000334895 NPY6RQ99463 290 aa22.49■■□□□ 1.19
TPM1-204ENST00000334895 CNPY3Q9BT09 278 aa22.49■■□□□ 1.19
TPM1-204ENST00000334895 IGFLR1Q9H665 355 aa22.49■■□□□ 1.19
TPM1-204ENST00000334895 ABCC13Q9NSE7 274 aa22.49■■□□□ 1.19
TPM1-204ENST00000334895 ANAPC1Q9H1A4 1944 aa22.49■■□□□ 1.19
TPM1-204ENST00000334895 HNRNPA1P09651 372 aaKnown RBP eCLIP22.48■■□□□ 1.19
TPM1-204ENST00000334895 POU3F3P20264 500 aaPredicted RBP22.48■■□□□ 1.19
TPM1-204ENST00000334895 COMTP21964 271 aa22.48■■□□□ 1.19
TPM1-204ENST00000334895 SDC4P31431 198 aa22.48■■□□□ 1.19
TPM1-204ENST00000334895 MAN1A1P33908 653 aa22.48■■□□□ 1.19
TPM1-204ENST00000334895 PIGHQ14442 188 aaPredicted RBP22.48■■□□□ 1.19
TPM1-204ENST00000334895 TAF12Q16514 161 aa22.48■■□□□ 1.19
TPM1-204ENST00000334895 BTBD8Q5XKL5 378 aa22.48■■□□□ 1.19
TPM1-204ENST00000334895 BNIPLQ7Z465 357 aa22.48■■□□□ 1.19
TPM1-204ENST00000334895 NT5DC3Q86UY8 548 aa22.48■■□□□ 1.19
TPM1-204ENST00000334895 ARHGAP18Q8N392 663 aa22.48■■□□□ 1.19
TPM1-204ENST00000334895 OVCA2Q8WZ82 227 aa22.48■■□□□ 1.19
TPM1-204ENST00000334895 GOLGA1Q92805 767 aa22.48■■□□□ 1.19
TPM1-204ENST00000334895 PPP2R3CQ969Q6 453 aa22.48■■□□□ 1.19
TPM1-204ENST00000334895 ZNF707Q96C28 371 aaPredicted RBP22.48■■□□□ 1.19
TPM1-204ENST00000334895 ZNF512Q96ME7 567 aaPredicted RBP22.48■■□□□ 1.19
TPM1-204ENST00000334895 TBCBQ99426 244 aa22.48■■□□□ 1.19
TPM1-204ENST00000334895 TLR8Q9NR97 1041 aaKnown RBP22.48■■□□□ 1.19
TPM1-204ENST00000334895 HCFC1R1Q9NWW0 138 aa22.48■■□□□ 1.19
TPM1-204ENST00000334895 ZDHHC7Q9NXF8 308 aa22.48■■□□□ 1.19
TPM1-204ENST00000334895 DPP7Q9UHL4 492 aa22.48■■□□□ 1.19
TPM1-204ENST00000334895 NOTCH4Q99466 2003 aa22.47■■□□□ 1.19
TPM1-204ENST00000334895 ZNF840PA6NDX5 716 aa22.47■■□□□ 1.19
TPM1-204ENST00000334895 NRG2O14511 850 aaPredicted RBP22.47■■□□□ 1.19
TPM1-204ENST00000334895 CAPN9O14815 690 aa22.47■■□□□ 1.19
TPM1-204ENST00000334895 LINC01565O15544 149 aa22.47■■□□□ 1.19
TPM1-204ENST00000334895 PAPLNO95428 1278 aa22.47■■□□□ 1.19
TPM1-204ENST00000334895 F11P03951 625 aa22.47■■□□□ 1.19
TPM1-204ENST00000334895 TCF4P15884 667 aa22.47■■□□□ 1.19
TPM1-204ENST00000334895 ATP11AP98196 1134 aa22.47■■□□□ 1.19
TPM1-204ENST00000334895 SLC25A52Q3SY17 297 aa22.47■■□□□ 1.19
TPM1-204ENST00000334895 SNX30Q5VWJ9 437 aa22.47■■□□□ 1.19
TPM1-204ENST00000334895 CENPIQ92674 756 aaPredicted RBP22.47■■□□□ 1.19
TPM1-204ENST00000334895 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.47■■□□□ 1.193e-7■■■□□ 15.3
TPM1-204ENST00000334895 CLIC5Q9NZA1 410 aa22.47■■□□□ 1.19
TPM1-204ENST00000334895 NUDT5Q9UKK9 219 aa22.47■■□□□ 1.19
TPM1-204ENST00000334895 USTQ9Y2C2 406 aa22.47■■□□□ 1.19
TPM1-204ENST00000334895 PRUNE2Q8WUY3 3088 aa22.47■■□□□ 1.19
TPM1-204ENST00000334895 BRWD1Q9NSI6 2320 aa22.46■■□□□ 1.19
TPM1-204ENST00000334895 LRCH4O75427 683 aa22.46■■□□□ 1.19
TPM1-204ENST00000334895 PSEN1P49768 467 aa22.46■■□□□ 1.19
TPM1-204ENST00000334895 CDO1Q16878 200 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms