RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 VIPAS39Q9H9C1 493 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 GPATCH2LQ9NWQ4 482 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 FGBP02675 491 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 ACLYP53396 1101 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 HECTD3Q5T447 861 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 WDR59Q6PJI9 974 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 LRIG3Q6UXM1 1119 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 C3orf62Q6ZUJ4 267 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 DDX42Q86XP3 938 aaKnown RBP eCLIP11.62□□□□□ -0.55
POLR1B-202ENST00000333990 RNF135Q8IUD6 432 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 OR5B17Q8NGF7 314 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 PPP1R13LQ8WUF5 828 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 LPPQ93052 612 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 ACSF2Q96CM8 615 aaPredicted RBP11.62□□□□□ -0.55
POLR1B-202ENST00000333990 TMA16Q96EY4 203 aaKnown RBP11.62□□□□□ -0.55
POLR1B-202ENST00000333990 SERPINI1Q99574 410 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 HAUS8Q9BT25 410 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 ADGRE3Q9BY15 652 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 RWDD3Q9Y3V2 267 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 SYNCRIPO60506 623 aaKnown RBP11.61□□□□□ -0.55
POLR1B-202ENST00000333990 PEX10O60683 326 aa11.61□□□□□ -0.55
POLR1B-202ENST00000333990 SNRPAP09012 282 aaKnown RBP11.61□□□□□ -0.55
POLR1B-202ENST00000333990 CYP2F1P24903 491 aa11.61□□□□□ -0.55
POLR1B-202ENST00000333990 NR2C2P49116 596 aa11.61□□□□□ -0.55
POLR1B-202ENST00000333990 ILF2Q12905 390 aaKnown RBP11.61□□□□□ -0.55
POLR1B-202ENST00000333990 GRB14Q14449 540 aa11.61□□□□□ -0.55
POLR1B-202ENST00000333990 MEI1Q5TIA1 1274 aa11.61□□□□□ -0.55
POLR1B-202ENST00000333990 ACTL9Q8TC94 416 aa11.61□□□□□ -0.55
POLR1B-202ENST00000333990 SNX19Q92543 992 aa11.61□□□□□ -0.55
POLR1B-202ENST00000333990 RSRC1Q96IZ7 334 aaKnown RBP11.61□□□□□ -0.55
POLR1B-202ENST00000333990 ASAH2Q9NR71 780 aa11.61□□□□□ -0.55
POLR1B-202ENST00000333990 FGFR1OP2Q9NVK5 253 aa11.61□□□□□ -0.55
POLR1B-202ENST00000333990 COL2A1P02458 1487 aaPredicted RBP11.61□□□□□ -0.55
POLR1B-202ENST00000333990 CCDC85CA6NKD9 419 aa11.61□□□□□ -0.55
POLR1B-202ENST00000333990 SERPINF2P08697 491 aa11.61□□□□□ -0.55
POLR1B-202ENST00000333990 CCDC130P13994 396 aa11.61□□□□□ -0.55
POLR1B-202ENST00000333990 GGCXP38435 758 aa11.61□□□□□ -0.55
POLR1B-202ENST00000333990 CTCFP49711 727 aaPredicted RBP11.61□□□□□ -0.55
POLR1B-202ENST00000333990 ENPEPQ07075 957 aa11.61□□□□□ -0.55
POLR1B-202ENST00000333990 TBX2Q13207 712 aaPredicted RBP11.61□□□□□ -0.55
POLR1B-202ENST00000333990 RRP1BQ14684 758 aaKnown RBP11.61□□□□□ -0.55
POLR1B-202ENST00000333990 MFN1Q8IWA4 741 aa11.61□□□□□ -0.55
POLR1B-202ENST00000333990 LMNTD2Q8IXW0 634 aa11.61□□□□□ -0.55
POLR1B-202ENST00000333990 TRABDQ9H4I3 376 aa11.61□□□□□ -0.55
POLR1B-202ENST00000333990 AFF4Q9UHB7 1163 aaKnown RBP11.61□□□□□ -0.55
POLR1B-202ENST00000333990 BAIAP2L1Q9UHR4 511 aa11.61□□□□□ -0.55
POLR1B-202ENST00000333990 DRG1Q9Y295 367 aaKnown RBP11.61□□□□□ -0.55
POLR1B-202ENST00000333990 SMIM28A0A1B0GU29 152 aa11.61□□□□□ -0.55
POLR1B-202ENST00000333990 PJA2O43164 708 aa11.61□□□□□ -0.55
POLR1B-202ENST00000333990 JCHAINP01591 159 aa11.61□□□□□ -0.55
POLR1B-202ENST00000333990 UGT3A1Q6NUS8 523 aa11.61□□□□□ -0.55
POLR1B-202ENST00000333990 PIGZQ86VD9 579 aa11.61□□□□□ -0.55
POLR1B-202ENST00000333990 VAT1Q99536 393 aa11.61□□□□□ -0.55
POLR1B-202ENST00000333990 FAM118BQ9BPY3 351 aa11.61□□□□□ -0.55
POLR1B-202ENST00000333990 NTPCRQ9BSD7 190 aaKnown RBP11.61□□□□□ -0.55
POLR1B-202ENST00000333990 TTPALQ9BTX7 342 aa11.61□□□□□ -0.55
POLR1B-202ENST00000333990 EML4Q9HC35 981 aaKnown RBP11.61□□□□□ -0.55
POLR1B-202ENST00000333990 SMPD4Q9NXE4 827 aa11.61□□□□□ -0.55
POLR1B-202ENST00000333990 PLCH1Q4KWH8 1693 aa11.61□□□□□ -0.55
POLR1B-202ENST00000333990 NUP188Q5SRE5 1749 aa11.61□□□□□ -0.55
POLR1B-202ENST00000333990 SIGLEC16A6NMB1 481 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 ESRRAP11474 423 aaPredicted RBP11.6□□□□□ -0.55
POLR1B-202ENST00000333990 CYP3A5P20815 502 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 PCK1P35558 622 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 KIF19Q2TAC6 998 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 GIPC2Q8TF65 315 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 GRAMD1AQ96CP6 724 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 RASSF4Q9H2L5 321 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 LRRC40Q9H9A6 602 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 TBC1D13Q9NVG8 400 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 DUSP10Q9Y6W6 482 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 CBX4O00257 560 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 LZTS3O60299 673 aaPredicted RBP11.6□□□□□ -0.55
POLR1B-202ENST00000333990 CAND2O75155 1236 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 CRTAMO95727 393 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 ERBB2P04626 1255 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 BMP6P22004 513 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 CASP2P42575 452 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 IFT88Q13099 833 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 DLK2Q6UY11 383 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 PALB2Q86YC2 1186 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 SLC28A3Q9HAS3 691 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 TRHDEQ9UKU6 1024 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 CCDC160A6NGH7 325 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 SDR42E2A6NKP2 422 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 IGF2BP3O00425 579 aaKnown RBP eCLIP11.6□□□□□ -0.55
POLR1B-202ENST00000333990 ESRRBO95718 433 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 EOMESO95936 686 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 OR1E1P30953 314 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 CHKAP35790 457 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 TUBP50607 506 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 ZNF284Q2VY69 593 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 ZRANB3Q5FWF4 1079 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 LDLRAD1Q5T700 205 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 DSG4Q86SJ6 1040 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 SLC51AQ86UW1 340 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 NUP93Q8N1F7 819 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 ATP13A1Q9HD20 1204 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 SCUBE2Q9NQ36 999 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 CNGB3Q9NQW8 809 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms