RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 PHKG1Q16816 387 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 SLC30A5Q8TAD4 765 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 ZNF285Q96NJ3 590 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 FAM118BQ9BPY3 351 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 MED14O60244 1454 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 MEI4A8MW99 385 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 KPNA3O00505 521 aaPredicted RBP10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 ATP6V1B2P21281 511 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 NEDD8Q15843 81 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 EDRF1Q3B7T1 1238 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 FAM98BQ52LJ0 330 aaKnown RBP10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 MZT2AQ6P582 158 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 KCTD1Q719H9 257 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 UTS2BQ765I0 119 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 DEFB107AQ8IZN7 70 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 ADI1Q9BV57 179 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 HEATR9A2RTY3 570 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 SERPINB5P36952 375 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 CPA2P48052 419 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 GSSP48637 474 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 ARHGDIBP52566 201 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 RIC8BQ9NVN3 520 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 GPATCH8Q9UKJ3 1502 aaKnown RBP10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 A0A0A6YYK5 440 aaPredicted RBP10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 CLOCKO15516 846 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 HUS1O60921 280 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 TRIM3O75382 744 aaPredicted RBP10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 PDHA2P29803 388 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 SLC9A4Q6AI14 798 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 TMCO6Q96DC7 493 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 ELOVL6Q9H5J4 265 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 MAN1C1Q9NR34 630 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 APC2O95996 2303 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 TIMM44O43615 452 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 SPRP35270 261 aaPredicted RBP10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 SLC26A3P40879 764 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 COPZ1P61923 177 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 RHAGQ02094 409 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 UBE3CQ15386 1083 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 ASPRV1Q53RT3 343 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 TMEM270Q6UE05 265 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 STK32CQ86UX6 486 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 PROSER1Q86XN7 944 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 POC5Q8NA72 575 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 GPR108Q9NPR9 543 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 TUBE1Q9UJT0 475 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 KPNA5O15131 536 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 CAMTA2O94983 1202 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 AKT1P31749 480 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 CCT8P50990 548 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 DLGAP5Q15398 846 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 SFRP1Q8N474 314 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 ITPKCQ96DU7 683 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 CCNB1IP1Q9NPC3 277 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 ECE2O60344 883 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 RAB43Q86YS6 212 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 HS6ST3Q8IZP7 471 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 TMEM237Q96Q45 408 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 CHCHD6Q9BRQ6 235 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 KNTC1P50748 2209 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 USP17L12C9JPN9 530 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 USP17L21D6R901 530 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 EIF2AK2P19525 551 aaKnown RBP10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 PSMB9P28065 219 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 CEBPGP53567 150 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 SLC27A3Q5K4L6 730 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 FOXR1Q6PIV2 292 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 ZNF662Q6ZS27 426 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 CCNJLQ8IV13 435 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 ERI1Q8IV48 349 aaKnown RBP10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 CHERPQ8IWX8 916 aaKnown RBP10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 PPIL6Q8IXY8 311 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 VPS33AQ96AX1 596 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 TAMM41Q96BW9 452 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 TIPINQ9BVW5 301 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 KATNAL1Q9BW62 490 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 INTS2Q9H0H0 1204 aaKnown RBP10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 TMEM138Q9NPI0 162 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 DNAJB4Q9UDY4 337 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 GTF3C4Q9UKN8 822 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 CDK5RAP2Q96SN8 1893 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 A0A087X0T9 212 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 YWHAQP27348 245 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 ADSSP30520 456 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 ALDH1A3P47895 512 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 NIPAL1Q6NVV3 410 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 PLBD2Q8NHP8 589 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 SNIP1Q8TAD8 396 aaKnown RBP10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 S100PBPQ96BU1 408 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 ZC3H10Q96K80 434 aaKnown RBP10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 ERGIC2Q96RQ1 377 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 GPATCH1Q9BRR8 931 aaKnown RBP10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 LATS2Q9NRM7 1088 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 DNAJC11Q9NVH1 559 aa10.63□□□□□ -0.71
SPTBN1-201ENST00000333896 WDR62O43379 1518 aa10.62□□□□□ -0.71
SPTBN1-201ENST00000333896 KHDRBS3O75525 346 aaKnown RBP10.62□□□□□ -0.71
SPTBN1-201ENST00000333896 CDC16Q13042 620 aa10.62□□□□□ -0.71
SPTBN1-201ENST00000333896 PIGHQ14442 188 aaPredicted RBP10.62□□□□□ -0.71
SPTBN1-201ENST00000333896 RBM47A0AV96 593 aaKnown RBP10.62□□□□□ -0.71
SPTBN1-201ENST00000333896 IDO1P14902 403 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms