RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 CCT8L2Q96SF2 557 aa9.4□□□□□ -0.91
COPB2-201ENST00000333188 BEGAINQ9BUH8 593 aa9.4□□□□□ -0.91
COPB2-201ENST00000333188 DDX56Q9NY93 547 aaKnown RBP9.4□□□□□ -0.91
COPB2-201ENST00000333188 C5orf42Q9H799 3197 aa9.39□□□□□ -0.91
COPB2-201ENST00000333188 ZNFX1Q9P2E3 1918 aaKnown RBP9.39□□□□□ -0.91
COPB2-201ENST00000333188 PAPPA2Q9BXP8 1791 aa9.39□□□□□ -0.91
COPB2-201ENST00000333188 GPR182O15218 404 aa9.39□□□□□ -0.91
COPB2-201ENST00000333188 RARGP13631 454 aa9.39□□□□□ -0.91
COPB2-201ENST00000333188 GRK4P32298 578 aa9.39□□□□□ -0.91
COPB2-201ENST00000333188 CLUL1Q15846 466 aa9.39□□□□□ -0.91
COPB2-201ENST00000333188 TAF12Q16514 161 aa9.39□□□□□ -0.91
COPB2-201ENST00000333188 EML3Q32P44 896 aa9.39□□□□□ -0.91
COPB2-201ENST00000333188 SLC39A12Q504Y0 691 aa9.39□□□□□ -0.91
COPB2-201ENST00000333188 FAM133BQ5BKY9 247 aaKnown RBP9.39□□□□□ -0.91
COPB2-201ENST00000333188 UBXN11Q5T124 520 aa9.39□□□□□ -0.91
COPB2-201ENST00000333188 HEATR6Q6AI08 1181 aaKnown RBP9.39□□□□□ -0.91
COPB2-201ENST00000333188 KCNT2Q6UVM3 1135 aa9.39□□□□□ -0.91
COPB2-201ENST00000333188 GLB1LQ6UWU2 654 aa9.39□□□□□ -0.91
COPB2-201ENST00000333188 GPRIN1Q7Z2K8 1008 aa9.39□□□□□ -0.91
COPB2-201ENST00000333188 FUKQ8N0W3 1084 aa9.39□□□□□ -0.91
COPB2-201ENST00000333188 OTUD6BQ8N6M0 293 aa9.39□□□□□ -0.91
COPB2-201ENST00000333188 USP6NLQ92738 828 aa9.39□□□□□ -0.91
COPB2-201ENST00000333188 UNKQ9C0B0 810 aaKnown RBP9.39□□□□□ -0.91
COPB2-201ENST00000333188 KLHL8Q9P2G9 620 aaPredicted RBP9.39□□□□□ -0.91
COPB2-201ENST00000333188 RLFQ13129 1914 aa9.39□□□□□ -0.91
COPB2-201ENST00000333188 PSME4Q14997 1843 aa9.39□□□□□ -0.91
COPB2-201ENST00000333188 C2CD4BA6NLJ0 364 aa9.39□□□□□ -0.91
COPB2-201ENST00000333188 EIF3HO15372 352 aaKnown RBP eCLIP9.39□□□□□ -0.91
COPB2-201ENST00000333188 FAM155BO75949 473 aa9.39□□□□□ -0.91
COPB2-201ENST00000333188 TPH1P17752 444 aa9.39□□□□□ -0.91
COPB2-201ENST00000333188 RPL17P18621 184 aaKnown RBP9.39□□□□□ -0.91
COPB2-201ENST00000333188 ERFP50548 548 aa9.39□□□□□ -0.91
COPB2-201ENST00000333188 YWHAZP63104 245 aaKnown RBP9.39□□□□□ -0.91
COPB2-201ENST00000333188 BMPR2Q13873 1038 aa9.39□□□□□ -0.91
COPB2-201ENST00000333188 MGAT5BQ3V5L5 792 aa9.39□□□□□ -0.91
COPB2-201ENST00000333188 OVOS1Q6IE37 1185 aa9.39□□□□□ -0.91
COPB2-201ENST00000333188 AGMOQ6ZNB7 445 aa9.39□□□□□ -0.91
COPB2-201ENST00000333188 TFAP2DQ7Z6R9 452 aa9.39□□□□□ -0.91
COPB2-201ENST00000333188 RNF208Q9H0X6 261 aa9.39□□□□□ -0.91
COPB2-201ENST00000333188 CCDC195A0A1B0GUA6 201 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 C9IYK1 514 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 MTA2O94776 668 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 TTC4O95801 387 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 PFKMP08237 780 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 GPR15P49685 360 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 HDAC4P56524 1084 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 GJA9P57773 515 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 FNBP1LQ5T0N5 605 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 IL31Q6EBC2 164 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 KIAA1841Q6NSI8 718 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 NLRP14Q86W24 1093 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 ANKRD52Q8NB46 1076 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 KBTBD7Q8WVZ9 684 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 RUNDC3BQ96NL0 473 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 HOMER3Q9NSC5 361 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 PCDHGC3Q9UN70 934 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 PPME1Q9Y570 386 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 TCP11X1B4DZS4 312 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 ELK3P41970 407 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 SLC25A11Q02978 314 aaKnown RBP9.38□□□□□ -0.91
COPB2-201ENST00000333188 LMNB2Q03252 620 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 TAP1Q03518 808 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 TFDP2Q14188 446 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 FAM187BQ17R55 369 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 MSS51Q4VC12 460 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 C6orf118Q5T5N4 469 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 FAM171A1Q5VUB5 890 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 SPATA2LQ8IUW3 424 aaPredicted RBP9.38□□□□□ -0.91
COPB2-201ENST00000333188 GIPC2Q8TF65 315 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 ART4Q93070 314 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 MYLPFQ96A32 169 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 PKNOX2Q96KN3 472 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 UBXN6Q9BZV1 441 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 IQCGQ9H095 443 aaKnown RBP9.38□□□□□ -0.91
COPB2-201ENST00000333188 SLC17A6Q9P2U8 582 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 DNAJB4Q9UDY4 337 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 ZNF646O15015 1829 aaPredicted RBP9.38□□□□□ -0.91
COPB2-201ENST00000333188 RBM47A0AV96 593 aaKnown RBP9.38□□□□□ -0.91
COPB2-201ENST00000333188 PPFIA2O75334 1257 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 TBX18O95935 607 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 INHAP05111 366 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 NPR3P17342 541 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 MAN1A1P33908 653 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 HADHBP55084 474 aaKnown RBP9.38□□□□□ -0.91
COPB2-201ENST00000333188 ARL4CP56559 192 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 SNX16P57768 344 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 INHBEP58166 350 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 NOGQ13253 232 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 DPYSL3Q14195 570 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 PKN2Q16513 984 aaKnown RBP9.38□□□□□ -0.91
COPB2-201ENST00000333188 KYAT1Q16773 422 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 UNC5BQ8IZJ1 945 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 PDCD7Q8N8D1 485 aaKnown RBP9.38□□□□□ -0.91
COPB2-201ENST00000333188 DBF4BQ8NFT6 615 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 PCDH19Q8TAB3 1148 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 FBF1Q8TES7 1133 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 TTC17Q96AE7 1141 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 DNAI2Q9GZS0 605 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 LHX5Q9H2C1 402 aa9.38□□□□□ -0.91
COPB2-201ENST00000333188 FGFR1OP2Q9NVK5 253 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms