RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 TRUB2O95900 331 aaKnown RBP24.5■■□□□ 1.51
TSKU-201ENST00000333090 ERBB2P04626 1255 aa24.5■■□□□ 1.51
TSKU-201ENST00000333090 APRTP07741 180 aa24.5■■□□□ 1.51
TSKU-201ENST00000333090 RAP1GAPP47736 663 aa24.5■■□□□ 1.51
TSKU-201ENST00000333090 LAMB3Q13751 1172 aa24.5■■□□□ 1.51
TSKU-201ENST00000333090 HIC1Q14526 733 aa24.5■■□□□ 1.51
TSKU-201ENST00000333090 TMCO4Q5TGY1 634 aa24.5■■□□□ 1.51
TSKU-201ENST00000333090 PRAMEF18Q5VWM3 479 aa24.5■■□□□ 1.51
TSKU-201ENST00000333090 SESTD1Q86VW0 696 aa24.5■■□□□ 1.51
TSKU-201ENST00000333090 RASSF3Q86WH2 238 aa24.5■■□□□ 1.51
TSKU-201ENST00000333090 XYLT1Q86Y38 959 aa24.5■■□□□ 1.51
TSKU-201ENST00000333090 DHX33Q9H6R0 707 aaKnown RBP24.5■■□□□ 1.51
TSKU-201ENST00000333090 A0A088AWK7 358 aa24.5■■□□□ 1.51
TSKU-201ENST00000333090 SUPT20HL2P0C7V6 817 aa24.5■■□□□ 1.51
TSKU-201ENST00000333090 CSH1P0DML2 217 aa24.5■■□□□ 1.51
TSKU-201ENST00000333090 CSH2P0DML3 217 aa24.5■■□□□ 1.51
TSKU-201ENST00000333090 OSBPP22059 807 aa24.5■■□□□ 1.51
TSKU-201ENST00000333090 ASPAP45381 313 aa24.5■■□□□ 1.51
TSKU-201ENST00000333090 CDK7P50613 346 aa24.5■■□□□ 1.51
TSKU-201ENST00000333090 PDE1BQ01064 536 aa24.5■■□□□ 1.51
TSKU-201ENST00000333090 STX3Q13277 289 aa24.5■■□□□ 1.51
TSKU-201ENST00000333090 TBCCQ15814 346 aa24.5■■□□□ 1.51
TSKU-201ENST00000333090 DUOXA2Q1HG44 320 aa24.5■■□□□ 1.51
TSKU-201ENST00000333090 SUPT20HL1Q3ZLR7 823 aa24.5■■□□□ 1.51
TSKU-201ENST00000333090 PPP1R14CQ8TAE6 165 aa24.5■■□□□ 1.51
TSKU-201ENST00000333090 RPAP3Q9H6T3 665 aaPredicted RBP24.5■■□□□ 1.51
TSKU-201ENST00000333090 PLAC1Q9HBJ0 212 aa24.5■■□□□ 1.51
TSKU-201ENST00000333090 BUD23O43709 281 aaKnown RBP24.49■■□□□ 1.51
TSKU-201ENST00000333090 FKBP6O75344 327 aa24.49■■□□□ 1.51
TSKU-201ENST00000333090 LGR5O75473 907 aa24.49■■□□□ 1.51
TSKU-201ENST00000333090 KRT38O76015 456 aa24.49■■□□□ 1.51
TSKU-201ENST00000333090 ARL2P36404 184 aa24.49■■□□□ 1.51
TSKU-201ENST00000333090 AP3M2P53677 418 aa24.49■■□□□ 1.51
TSKU-201ENST00000333090 CXCL9Q07325 125 aa24.49■■□□□ 1.51
TSKU-201ENST00000333090 LIN52Q52LA3 116 aa24.49■■□□□ 1.51
TSKU-201ENST00000333090 ARHGAP18Q8N392 663 aa24.49■■□□□ 1.51
TSKU-201ENST00000333090 POU5F2Q8N7G0 328 aa24.49■■□□□ 1.51
TSKU-201ENST00000333090 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.49■■□□□ 1.51
TSKU-201ENST00000333090 NSUN6Q8TEA1 469 aaKnown RBP24.49■■□□□ 1.51
TSKU-201ENST00000333090 AZIN2Q96A70 460 aa24.49■■□□□ 1.51
TSKU-201ENST00000333090 PEBP4Q96S96 227 aa24.49■■□□□ 1.51
TSKU-201ENST00000333090 APOL6Q9BWW8 343 aa24.49■■□□□ 1.51
TSKU-201ENST00000333090 DMAP1Q9NPF5 467 aaPredicted RBP24.49■■□□□ 1.51
TSKU-201ENST00000333090 SNNO75324 88 aaPredicted RBP24.49■■□□□ 1.51
TSKU-201ENST00000333090 TOM1L1O75674 476 aa24.49■■□□□ 1.51
TSKU-201ENST00000333090 BPGMP07738 259 aa24.49■■□□□ 1.51
TSKU-201ENST00000333090 CPOXP36551 454 aa24.49■■□□□ 1.51
TSKU-201ENST00000333090 CCNFP41002 786 aa24.49■■□□□ 1.51
TSKU-201ENST00000333090 DYNC1I2Q13409 638 aaKnown RBP24.49■■□□□ 1.51
TSKU-201ENST00000333090 SH3PXD2AQ5TCZ1 1133 aa24.49■■□□□ 1.51
TSKU-201ENST00000333090 KYAT3Q6YP21 454 aaKnown RBP24.49■■□□□ 1.51
TSKU-201ENST00000333090 OR6Y1Q8NGX8 325 aa24.49■■□□□ 1.51
TSKU-201ENST00000333090 LRRN4Q8WUT4 740 aa24.49■■□□□ 1.51
TSKU-201ENST00000333090 CENPKQ9BS16 269 aa24.49■■□□□ 1.51
TSKU-201ENST00000333090 C1orf21Q9H246 121 aa24.49■■□□□ 1.51
TSKU-201ENST00000333090 PAK5Q9P286 719 aa24.49■■□□□ 1.51
TSKU-201ENST00000333090 VWA5AO00534 786 aa24.48■■□□□ 1.51
TSKU-201ENST00000333090 OATP04181 439 aa24.48■■□□□ 1.51
TSKU-201ENST00000333090 XAB2Q9HCS7 855 aaKnown RBP24.48■■□□□ 1.51
TSKU-201ENST00000333090 S100A14Q9HCY8 104 aa24.48■■□□□ 1.51
TSKU-201ENST00000333090 MAD1L1Q9Y6D9 718 aa24.48■■□□□ 1.51
TSKU-201ENST00000333090 PRKCHP24723 683 aa24.48■■□□□ 1.51
TSKU-201ENST00000333090 EPHB1P54762 984 aa24.48■■□□□ 1.51
TSKU-201ENST00000333090 ASPHQ12797 758 aa24.48■■□□□ 1.51
TSKU-201ENST00000333090 CAPSQ13938 189 aa24.48■■□□□ 1.51
TSKU-201ENST00000333090 RAB6CQ53S08 254 aa24.48■■□□□ 1.51
TSKU-201ENST00000333090 EFHC1Q5JVL4 640 aa24.48■■□□□ 1.51
TSKU-201ENST00000333090 TRMT10BQ6PF06 316 aaKnown RBP24.48■■□□□ 1.51
TSKU-201ENST00000333090 DHDDSQ86SQ9 333 aa24.48■■□□□ 1.51
TSKU-201ENST00000333090 CAND1Q86VP6 1230 aaKnown RBP24.48■■□□□ 1.51
TSKU-201ENST00000333090 RAB6CQ9H0N0 254 aa24.48■■□□□ 1.51
TSKU-201ENST00000333090 ZNF302Q9NR11 478 aa24.48■■□□□ 1.51
TSKU-201ENST00000333090 HEY1Q9Y5J3 304 aa24.48■■□□□ 1.51
TSKU-201ENST00000333090 SDR42E2A6NKP2 422 aa24.48■■□□□ 1.51
TSKU-201ENST00000333090 OPHN1O60890 802 aa24.48■■□□□ 1.51
TSKU-201ENST00000333090 APOEP02649 317 aa24.48■■□□□ 1.51
TSKU-201ENST00000333090 SLC26A7Q8TE54 656 aa24.48■■□□□ 1.51
TSKU-201ENST00000333090 EPAS1Q99814 870 aa24.48■■□□□ 1.51
TSKU-201ENST00000333090 USP29Q9HBJ7 922 aa24.48■■□□□ 1.51
TSKU-201ENST00000333090 ETS2P15036 469 aa24.47■■□□□ 1.51
TSKU-201ENST00000333090 WASHC5Q12768 1159 aa24.47■■□□□ 1.51
TSKU-201ENST00000333090 PDCD2Q16342 344 aaPredicted RBP24.47■■□□□ 1.51
TSKU-201ENST00000333090 RALGPS1Q5JS13 557 aa24.47■■□□□ 1.51
TSKU-201ENST00000333090 LPCAT4Q643R3 524 aa24.47■■□□□ 1.51
TSKU-201ENST00000333090 ST13P4Q8IZP2 240 aaPredicted RBP24.47■■□□□ 1.51
TSKU-201ENST00000333090 STKLD1Q8NE28 680 aa24.47■■□□□ 1.51
TSKU-201ENST00000333090 FAM172AQ8WUF8 416 aa24.47■■□□□ 1.51
TSKU-201ENST00000333090 CCDC124Q96CT7 223 aaKnown RBP24.47■■□□□ 1.51
TSKU-201ENST00000333090 LHX5Q9H2C1 402 aa24.47■■□□□ 1.51
TSKU-201ENST00000333090 TRDMT1O14717 391 aaKnown RBP24.47■■□□□ 1.51
TSKU-201ENST00000333090 LYPLA1O75608 230 aaPredicted RBP24.47■■□□□ 1.51
TSKU-201ENST00000333090 AOC1P19801 751 aa24.47■■□□□ 1.51
TSKU-201ENST00000333090 CDH8P55286 799 aa24.47■■□□□ 1.51
TSKU-201ENST00000333090 UNC5AQ6ZN44 842 aa24.47■■□□□ 1.51
TSKU-201ENST00000333090 MMP19Q99542 508 aa24.47■■□□□ 1.51
TSKU-201ENST00000333090 THAP1Q9NVV9 213 aa24.47■■□□□ 1.51
TSKU-201ENST00000333090 PGAP2Q9UHJ9 254 aa24.47■■□□□ 1.51
TSKU-201ENST00000333090 MED7O43513 233 aa24.46■■□□□ 1.51
TSKU-201ENST00000333090 RBL1P28749 1068 aa24.46■■□□□ 1.51
TSKU-201ENST00000333090 SP2Q02086 613 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms