RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 OLIG1Q8TAK6 271 aa12.29□□□□□ -0.44
SHMT2-201ENST00000328923 SLC35G2Q8TBE7 412 aa12.29□□□□□ -0.44
SHMT2-201ENST00000328923 C9orf72Q96LT7 481 aa12.29□□□□□ -0.44
SHMT2-201ENST00000328923 HAUS8Q9BT25 410 aa12.29□□□□□ -0.44
SHMT2-201ENST00000328923 SIX2Q9NPC8 291 aa12.29□□□□□ -0.44
SHMT2-201ENST00000328923 POTEMA6NI47 508 aa12.28□□□□□ -0.44
SHMT2-201ENST00000328923 H3BNX3 289 aa12.28□□□□□ -0.44
SHMT2-201ENST00000328923 POLRMTO00411 1230 aaKnown RBP12.28□□□□□ -0.44
SHMT2-201ENST00000328923 SLC16A3O15427 465 aaKnown RBP12.28□□□□□ -0.44
SHMT2-201ENST00000328923 TSPAN9O75954 239 aa12.28□□□□□ -0.44
SHMT2-201ENST00000328923 MYL2P10916 166 aa12.28□□□□□ -0.44
SHMT2-201ENST00000328923 EPHB1P54762 984 aa12.28□□□□□ -0.44
SHMT2-201ENST00000328923 PPP2R2BQ00005 443 aa12.28□□□□□ -0.44
SHMT2-201ENST00000328923 CDKL1Q00532 357 aa12.28□□□□□ -0.44
SHMT2-201ENST00000328923 HIC1Q14526 733 aa12.28□□□□□ -0.44
SHMT2-201ENST00000328923 SPCS2Q15005 226 aa12.28□□□□□ -0.44
SHMT2-201ENST00000328923 TCEAL1Q15170 157 aa12.28□□□□□ -0.44
SHMT2-201ENST00000328923 Q3C1V9 767 aa12.28□□□□□ -0.44
SHMT2-201ENST00000328923 PLEKHA7Q6IQ23 1121 aa12.28□□□□□ -0.44
SHMT2-201ENST00000328923 TAS2R42Q7RTR8 314 aa12.28□□□□□ -0.44
SHMT2-201ENST00000328923 KIAA2013Q8IYS2 634 aa12.28□□□□□ -0.44
SHMT2-201ENST00000328923 LILRB1Q8NHL6 650 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-201ENST00000328923 COQ7Q99807 217 aa12.28□□□□□ -0.44
SHMT2-201ENST00000328923 PSD2Q9BQI7 771 aa12.28□□□□□ -0.44
SHMT2-201ENST00000328923 FERMT1Q9BQL6 677 aa12.28□□□□□ -0.44
SHMT2-201ENST00000328923 DCLK3Q9C098 648 aa12.28□□□□□ -0.44
SHMT2-201ENST00000328923 NDFIP2Q9NV92 336 aa12.28□□□□□ -0.44
SHMT2-201ENST00000328923 HERC5Q9UII4 1024 aaKnown RBP12.28□□□□□ -0.44
SHMT2-201ENST00000328923 CDC14AQ9UNH5 594 aa12.28□□□□□ -0.44
SHMT2-201ENST00000328923 ATP11BQ9Y2G3 1177 aa12.28□□□□□ -0.44
SHMT2-201ENST00000328923 NRXN2Q9P2S2 1712 aa12.28□□□□□ -0.44
SHMT2-201ENST00000328923 IGSF9BQ9UPX0 1349 aa12.28□□□□□ -0.44
SHMT2-201ENST00000328923 PCM1Q15154 2024 aa12.28□□□□□ -0.44
SHMT2-201ENST00000328923 TNPO2O14787 897 aaKnown RBP12.28□□□□□ -0.44
SHMT2-201ENST00000328923 DLDP09622 509 aaKnown RBP12.28□□□□□ -0.44
SHMT2-201ENST00000328923 XRCC5P13010 732 aaKnown RBP12.28□□□□□ -0.44
SHMT2-201ENST00000328923 KRT15P19012 456 aa12.28□□□□□ -0.44
SHMT2-201ENST00000328923 NR2F2P24468 414 aa12.28□□□□□ -0.44
SHMT2-201ENST00000328923 COILP38432 576 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-201ENST00000328923 STAT1P42224 750 aa12.28□□□□□ -0.44
SHMT2-201ENST00000328923 MARCKSL1P49006 195 aa12.28□□□□□ -0.44
SHMT2-201ENST00000328923 GNA12Q03113 381 aa12.28□□□□□ -0.44
SHMT2-201ENST00000328923 GJC2Q5T442 439 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-201ENST00000328923 C12orf60Q5U649 245 aa12.28□□□□□ -0.44
SHMT2-201ENST00000328923 C11orf63Q6NUN7 778 aa12.28□□□□□ -0.44
SHMT2-201ENST00000328923 RHBDF2Q6PJF5 856 aa12.28□□□□□ -0.44
SHMT2-201ENST00000328923 C15orf52Q6ZUT6 534 aaKnown RBP12.28□□□□□ -0.44
SHMT2-201ENST00000328923 FLAD1Q8NFF5 587 aa12.28□□□□□ -0.44
SHMT2-201ENST00000328923 PEX13Q92968 403 aa12.28□□□□□ -0.44
SHMT2-201ENST00000328923 SMG5Q9UPR3 1016 aaKnown RBP12.28□□□□□ -0.44
SHMT2-201ENST00000328923 A0A1W2PPM1 405 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 CCRL2O00421 344 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 RGS13O14921 159 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 HAT1O14929 419 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 SLC37A4O43826 429 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 GCAP28676 217 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 SLC1A1P43005 524 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 SLC25A3Q00325 362 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 STK11Q15831 433 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 SMU1Q2TAY7 513 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 LSM12Q3MHD2 195 aaKnown RBP12.27□□□□□ -0.45
SHMT2-201ENST00000328923 TOR1AIP2Q8NFQ8 470 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 LNX1Q8TBB1 728 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-201ENST00000328923 KRT35Q92764 455 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 MRRFQ96E11 262 aaKnown RBP12.27□□□□□ -0.45
SHMT2-201ENST00000328923 CDHR1Q96JP9 859 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 PSKH2Q96QS6 385 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 NUDT12Q9BQG2 462 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 C17orf80Q9BSJ5 609 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 SYT17Q9BSW7 474 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 SYT11Q9BT88 431 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 TSSK1BQ9BXA7 367 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 FGFBP2Q9BYJ0 223 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 C10orf88Q9H8K7 445 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 HMGXB4Q9UGU5 601 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 BCAP29Q9UHQ4 241 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 GNEQ9Y223 722 aaKnown RBP12.27□□□□□ -0.45
SHMT2-201ENST00000328923 FRMPD4Q14CM0 1322 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 FAM237BA0A1B0GVD1 139 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 A0A1W2PPW3 197 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 A8MX80 341 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 KPNA4O00629 521 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-201ENST00000328923 SEC24DO94855 1032 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-201ENST00000328923 UFL1O94874 794 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 P2RX3P56373 397 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 CHRNEQ04844 493 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 OXA1LQ15070 435 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 DLGAP5Q15398 846 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 TRIP13Q15645 432 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-201ENST00000328923 HACE1Q8IYU2 909 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 UBL4BQ8N7F7 174 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 TANKQ92844 425 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 SGIP1Q9BQI5 828 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 TMEM47Q9BQJ4 181 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 TAGLN3Q9UI15 199 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 CDH7Q9ULB5 785 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 SPEF1Q9Y4P9 236 aa12.27□□□□□ -0.45
SHMT2-201ENST00000328923 CENPBD1B2RD01 187 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 POC1B-GALNT4F8VUJ3 575 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 H7C0C1 242 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms