RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 WDR83Q9BRX9 315 aaKnown RBP13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 ELP3Q9H9T3 547 aa13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 BTBD7Q9P203 1132 aa13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 MYO18AQ92614 2054 aaKnown RBP13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 ACKR2O00590 384 aa13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 MAP3K7O43318 606 aa13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 F7P08709 466 aaPredicted RBP13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 GRIA1P42261 906 aa13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 PHKA2P46019 1235 aa13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 POLE2P56282 527 aa13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 HEATR6Q6AI08 1181 aaKnown RBP13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 C4orf50Q6ZRC1 276 aa13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 UNC5BQ8IZJ1 945 aa13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 MAGEB5Q9BZ81 275 aa13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 XYLT2Q9H1B5 865 aa13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 R3HDMLQ9H3Y0 253 aa13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 ADGRA2Q96PE1 1338 aa13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 GSC2O15499 205 aa13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 PIGRP01833 764 aa13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 KCNA4P22459 653 aa13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 ABCG1P45844 678 aa13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 OAZ1P54368 228 aa13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 CA9Q16790 459 aa13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 REPS2Q8NFH8 660 aa13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 NMRK1Q9NWW6 199 aa13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 PGAP2Q9UHJ9 254 aa13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 SOWAHBA6NEL2 793 aa13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 MAGEB2O15479 319 aa13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 CREB3O43889 395 aa13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 ZCCHC18P0CG32 403 aa13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 AP1B1Q10567 949 aa13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 STX3Q13277 289 aa13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 ACSBG2Q5FVE4 666 aa13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 CHST13Q8NET6 341 aa13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 WDR60Q8WVS4 1066 aa13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 SLC44A1Q8WWI5 657 aa13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 SCG3Q8WXD2 468 aaKnown RBP13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 NT5C1AQ9BXI3 368 aa13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 SPATC1LQ9H0A9 340 aa13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 VCXQ9H320 206 aa13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 TAS2R1Q9NYW7 299 aa13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 NUMBLQ9Y6R0 609 aa13.38□□□□□ -0.27
HMGCS1-201ENST00000325110 LYPLA1O75608 230 aaPredicted RBP13.37□□□□□ -0.27
HMGCS1-201ENST00000325110 VHLP40337 213 aa13.37□□□□□ -0.27
HMGCS1-201ENST00000325110 CCNHP51946 323 aaPredicted RBP13.37□□□□□ -0.27
HMGCS1-201ENST00000325110 YWHAZP63104 245 aaKnown RBP13.37□□□□□ -0.27
HMGCS1-201ENST00000325110 GHRHRQ02643 423 aa13.37□□□□□ -0.27
HMGCS1-201ENST00000325110 GBE1Q04446 702 aa13.37□□□□□ -0.27
HMGCS1-201ENST00000325110 FAM131BQ86XD5 332 aa13.37□□□□□ -0.27
HMGCS1-201ENST00000325110 EFCAB3Q8N7B9 438 aa13.37□□□□□ -0.27
HMGCS1-201ENST00000325110 DNERQ8NFT8 737 aa13.37□□□□□ -0.27
HMGCS1-201ENST00000325110 RNF157Q96PX1 679 aa13.37□□□□□ -0.27
HMGCS1-201ENST00000325110 SNRNP25Q9BV90 132 aaKnown RBP13.37□□□□□ -0.27
HMGCS1-201ENST00000325110 NIFKQ9BYG3 293 aaKnown RBP13.37□□□□□ -0.27
HMGCS1-201ENST00000325110 PDGFCQ9NRA1 345 aa13.37□□□□□ -0.27
HMGCS1-201ENST00000325110 SIX4Q9UIU6 781 aa13.37□□□□□ -0.27
HMGCS1-201ENST00000325110 WASF2Q9Y6W5 498 aa13.37□□□□□ -0.27
HMGCS1-201ENST00000325110 NPTXRO95502 500 aa13.37□□□□□ -0.27
HMGCS1-201ENST00000325110 ABL2P42684 1182 aa13.37□□□□□ -0.27
HMGCS1-201ENST00000325110 UBAP2LQ14157 1087 aaKnown RBP13.37□□□□□ -0.27
HMGCS1-201ENST00000325110 NOMO1Q15155 1222 aa13.37□□□□□ -0.27
HMGCS1-201ENST00000325110 WASHC2DQ5SRD0 308 aa13.37□□□□□ -0.27
HMGCS1-201ENST00000325110 WWP1Q9H0M0 922 aa13.37□□□□□ -0.27
HMGCS1-201ENST00000325110 PCDHGC3Q9UN70 934 aa13.37□□□□□ -0.27
HMGCS1-201ENST00000325110 HES2Q9Y543 173 aa13.37□□□□□ -0.27
HMGCS1-201ENST00000325110 DOCK5Q9H7D0 1870 aa13.37□□□□□ -0.27
HMGCS1-201ENST00000325110 A8MXQ7 604 aa13.36□□□□□ -0.27
HMGCS1-201ENST00000325110 SERPINB6P35237 376 aa13.36□□□□□ -0.27
HMGCS1-201ENST00000325110 FAM47CQ5HY64 1035 aa13.36□□□□□ -0.27
HMGCS1-201ENST00000325110 ZNF772Q68DY9 489 aaPredicted RBP13.36□□□□□ -0.27
HMGCS1-201ENST00000325110 ISLR2Q6UXK2 745 aa13.36□□□□□ -0.27
HMGCS1-201ENST00000325110 MPP5Q8N3R9 675 aa13.36□□□□□ -0.27
HMGCS1-201ENST00000325110 UCMAQ8WVF2 138 aa13.36□□□□□ -0.27
HMGCS1-201ENST00000325110 ATP2A3Q93084 1043 aa13.36□□□□□ -0.27
HMGCS1-201ENST00000325110 MMP19Q99542 508 aa13.36□□□□□ -0.27
HMGCS1-201ENST00000325110 DDX50Q9BQ39 737 aaKnown RBP13.36□□□□□ -0.27
HMGCS1-201ENST00000325110 SAR1AQ9NR31 198 aa13.36□□□□□ -0.27
HMGCS1-201ENST00000325110 ETNK2Q9NVF9 386 aa13.36□□□□□ -0.27
HMGCS1-201ENST00000325110 SCOCQ9UIL1 159 aa13.36□□□□□ -0.27
HMGCS1-201ENST00000325110 CNTN6Q9UQ52 1028 aa13.36□□□□□ -0.27
HMGCS1-201ENST00000325110 C3orf70A6NLC5 250 aaPredicted RBP13.36□□□□□ -0.27
HMGCS1-201ENST00000325110 LMNAP02545 664 aaKnown RBP13.36□□□□□ -0.27
HMGCS1-201ENST00000325110 INSRRP14616 1297 aa13.36□□□□□ -0.27
HMGCS1-201ENST00000325110 ZNF143P52747 638 aaPredicted RBP13.36□□□□□ -0.27
HMGCS1-201ENST00000325110 PPP1R15BQ5SWA1 713 aa13.36□□□□□ -0.27
HMGCS1-201ENST00000325110 MAP1SQ66K74 1059 aaPredicted RBP13.36□□□□□ -0.27
HMGCS1-201ENST00000325110 PLD5Q8N7P1 536 aa13.36□□□□□ -0.27
HMGCS1-201ENST00000325110 TSC22D3Q99576 134 aa13.36□□□□□ -0.27
HMGCS1-201ENST00000325110 DPPA5A6NC42 116 aa13.36□□□□□ -0.27
HMGCS1-201ENST00000325110 ZNF286BP0CG31 522 aa13.36□□□□□ -0.27
HMGCS1-201ENST00000325110 CSH1P0DML2 217 aa13.36□□□□□ -0.27
HMGCS1-201ENST00000325110 CSH2P0DML3 217 aa13.36□□□□□ -0.27
HMGCS1-201ENST00000325110 VDRP11473 427 aa13.36□□□□□ -0.27
HMGCS1-201ENST00000325110 KCNA3P22001 575 aa13.36□□□□□ -0.27
HMGCS1-201ENST00000325110 CYP2F1P24903 491 aa13.36□□□□□ -0.27
HMGCS1-201ENST00000325110 GMPRP36959 345 aa13.36□□□□□ -0.27
HMGCS1-201ENST00000325110 GTF2A2P52657 109 aa13.36□□□□□ -0.27
HMGCS1-201ENST00000325110 WDR75Q8IWA0 830 aaKnown RBP13.36□□□□□ -0.27
HMGCS1-201ENST00000325110 PPP4R1Q8TF05 950 aa13.36□□□□□ -0.27
HMGCS1-201ENST00000325110 MTBPQ96DY7 904 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms