RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 DCAF8L1A6NGE4 600 aa22.28■■□□□ 1.16
LIMS2-201ENST00000324938 HAS3O00219 553 aa22.28■■□□□ 1.16
LIMS2-201ENST00000324938 ECM2O94769 699 aaPredicted RBP22.28■■□□□ 1.16
LIMS2-201ENST00000324938 ELK3P41970 407 aa22.28■■□□□ 1.16
LIMS2-201ENST00000324938 PSEN2P49810 448 aa22.28■■□□□ 1.16
LIMS2-201ENST00000324938 DPYSL2Q16555 572 aa22.28■■□□□ 1.16
LIMS2-201ENST00000324938 OLFML2BQ68BL8 750 aa22.28■■□□□ 1.16
LIMS2-201ENST00000324938 DCAKDQ8WVC6 231 aa22.28■■□□□ 1.16
LIMS2-201ENST00000324938 FRMD8Q9BZ67 464 aaPredicted RBP22.28■■□□□ 1.16
LIMS2-201ENST00000324938 HAUS2Q9NVX0 235 aa22.28■■□□□ 1.16
LIMS2-201ENST00000324938 HEY1Q9Y5J3 304 aa22.28■■□□□ 1.16
LIMS2-201ENST00000324938 SPTLC1O15269 473 aa22.28■■□□□ 1.16
LIMS2-201ENST00000324938 ZBED1O96006 694 aa22.28■■□□□ 1.16
LIMS2-201ENST00000324938 TFE3P19532 575 aaPredicted RBP22.28■■□□□ 1.16
LIMS2-201ENST00000324938 ADORA2BP29275 332 aa22.28■■□□□ 1.16
LIMS2-201ENST00000324938 GNL1P36915 607 aaPredicted RBP22.28■■□□□ 1.16
LIMS2-201ENST00000324938 MAP2K5Q13163 448 aa22.28■■□□□ 1.16
LIMS2-201ENST00000324938 MTM1Q13496 603 aa22.28■■□□□ 1.16
LIMS2-201ENST00000324938 PDK4Q16654 411 aa22.28■■□□□ 1.16
LIMS2-201ENST00000324938 UBXN11Q5T124 520 aa22.28■■□□□ 1.16
LIMS2-201ENST00000324938 LIMS2Q7Z4I7 341 aa22.28■■□□□ 1.16
LIMS2-201ENST00000324938 IGDCC3Q8IVU1 814 aa22.28■■□□□ 1.16
LIMS2-201ENST00000324938 SUGP1Q8IWZ8 645 aaKnown RBP22.28■■□□□ 1.16
LIMS2-201ENST00000324938 GBP7Q8N8V2 638 aaPredicted RBP22.28■■□□□ 1.16
LIMS2-201ENST00000324938 CLEC4CQ8WTT0 213 aa22.28■■□□□ 1.16
LIMS2-201ENST00000324938 RAB6BQ9NRW1 208 aa22.28■■□□□ 1.16
LIMS2-201ENST00000324938 SPAG6O75602 509 aa22.27■■□□□ 1.16
LIMS2-201ENST00000324938 ZNF865P0CJ78 1059 aaPredicted RBP22.27■■□□□ 1.16
LIMS2-201ENST00000324938 RBL1P28749 1068 aa22.27■■□□□ 1.16
LIMS2-201ENST00000324938 MSH2P43246 934 aa22.27■■□□□ 1.16
LIMS2-201ENST00000324938 FUKQ8N0W3 1084 aa22.27■■□□□ 1.16
LIMS2-201ENST00000324938 LENG1Q96BZ8 264 aaPredicted RBP22.27■■□□□ 1.16
LIMS2-201ENST00000324938 CYTH2Q99418 400 aa22.27■■□□□ 1.16
LIMS2-201ENST00000324938 PITPNM3Q9BZ71 974 aa22.27■■□□□ 1.16
LIMS2-201ENST00000324938 SNX25Q9H3E2 840 aa22.27■■□□□ 1.16
LIMS2-201ENST00000324938 NRDE2Q9H7Z3 1164 aa22.27■■□□□ 1.16
LIMS2-201ENST00000324938 KLK14Q9P0G3 267 aa22.27■■□□□ 1.16
LIMS2-201ENST00000324938 GRID1Q9ULK0 1009 aa22.27■■□□□ 1.16
LIMS2-201ENST00000324938 UBOX5O94941 541 aa22.27■■□□□ 1.15
LIMS2-201ENST00000324938 ZWINTO95229 277 aa22.27■■□□□ 1.15
LIMS2-201ENST00000324938 PDGFRBP09619 1106 aa22.27■■□□□ 1.15
LIMS2-201ENST00000324938 KRT4P19013 534 aa22.27■■□□□ 1.15
LIMS2-201ENST00000324938 CYP2F1P24903 491 aa22.27■■□□□ 1.15
LIMS2-201ENST00000324938 LMO2P25791 158 aa22.27■■□□□ 1.15
LIMS2-201ENST00000324938 MAGEA6P43360 314 aa22.27■■□□□ 1.15
LIMS2-201ENST00000324938 ACADSBP45954 432 aa22.27■■□□□ 1.15
LIMS2-201ENST00000324938 TAF6P49848 677 aa22.27■■□□□ 1.15
LIMS2-201ENST00000324938 SLC1A5Q15758 541 aa22.27■■□□□ 1.15
LIMS2-201ENST00000324938 GALNTL6Q49A17 601 aa22.27■■□□□ 1.15
LIMS2-201ENST00000324938 PPP6R3Q5H9R7 873 aaPredicted RBP22.27■■□□□ 1.15
LIMS2-201ENST00000324938 RNF43Q68DV7 783 aa22.27■■□□□ 1.15
LIMS2-201ENST00000324938 ADAM33Q9BZ11 813 aa22.27■■□□□ 1.15
LIMS2-201ENST00000324938 DNAI2Q9GZS0 605 aa22.27■■□□□ 1.15
LIMS2-201ENST00000324938 KLC4Q9NSK0 619 aa22.27■■□□□ 1.15
LIMS2-201ENST00000324938 FLRT1Q9NZU1 646 aa22.27■■□□□ 1.15
LIMS2-201ENST00000324938 KBTBD13C9JR72 458 aa22.26■■□□□ 1.15
LIMS2-201ENST00000324938 TREHO43280 583 aa22.26■■□□□ 1.15
LIMS2-201ENST00000324938 L1CAMP32004 1257 aa22.26■■□□□ 1.15
LIMS2-201ENST00000324938 SV2CQ496J9 727 aa22.26■■□□□ 1.15
LIMS2-201ENST00000324938 FAM133BQ5BKY9 247 aaKnown RBP22.26■■□□□ 1.15
LIMS2-201ENST00000324938 CDKL3Q8IVW4 592 aaPredicted RBP22.26■■□□□ 1.15
LIMS2-201ENST00000324938 C2orf69Q8N8R5 385 aa22.26■■□□□ 1.15
LIMS2-201ENST00000324938 APPL2Q8NEU8 664 aa22.26■■□□□ 1.15
LIMS2-201ENST00000324938 HSFY1Q96LI6 401 aa22.26■■□□□ 1.15
LIMS2-201ENST00000324938 RNF39Q9H2S5 420 aa22.26■■□□□ 1.15
LIMS2-201ENST00000324938 CPA4Q9UI42 421 aa22.26■■□□□ 1.15
LIMS2-201ENST00000324938 STARD13Q9Y3M8 1113 aa22.26■■□□□ 1.15
LIMS2-201ENST00000324938 CAPN15O75808 1086 aa22.25■■□□□ 1.15
LIMS2-201ENST00000324938 SOX4Q06945 474 aaPredicted RBP22.25■■□□□ 1.15
LIMS2-201ENST00000324938 FAM47EQ6ZV65 393 aa22.25■■□□□ 1.15
LIMS2-201ENST00000324938 KLC2Q9H0B6 622 aa22.25■■□□□ 1.15
LIMS2-201ENST00000324938 KLHL14Q9P2G3 628 aa22.25■■□□□ 1.15
LIMS2-201ENST00000324938 GTF2IRD1Q9UHL9 959 aa22.25■■□□□ 1.15
LIMS2-201ENST00000324938 TCRBV9S1A1TA0A576 114 aa22.25■■□□□ 1.15
LIMS2-201ENST00000324938 LCP1P13796 627 aa22.25■■□□□ 1.15
LIMS2-201ENST00000324938 GBP2P32456 591 aaPredicted RBP22.25■■□□□ 1.15
LIMS2-201ENST00000324938 CPT1AP50416 773 aa22.25■■□□□ 1.15
LIMS2-201ENST00000324938 YWHAZP63104 245 aaKnown RBP22.25■■□□□ 1.15
LIMS2-201ENST00000324938 DNAJC3Q13217 504 aa22.25■■□□□ 1.15
LIMS2-201ENST00000324938 ZNF618Q5T7W0 954 aa22.25■■□□□ 1.15
LIMS2-201ENST00000324938 CYB5D1Q6P9G0 228 aa22.25■■□□□ 1.15
LIMS2-201ENST00000324938 C4orf22Q6V702 233 aa22.25■■□□□ 1.15
LIMS2-201ENST00000324938 SLC2A14Q8TDB8 520 aa22.25■■□□□ 1.15
LIMS2-201ENST00000324938 ALKBH8Q96BT7 664 aaKnown RBP22.25■■□□□ 1.15
LIMS2-201ENST00000324938 PNPLA8Q9NP80 782 aa22.25■■□□□ 1.15
LIMS2-201ENST00000324938 ETNK2Q9NVF9 386 aa22.25■■□□□ 1.15
LIMS2-201ENST00000324938 AP4E1Q9UPM8 1137 aa22.25■■□□□ 1.15
LIMS2-201ENST00000324938 PIAS1O75925 651 aa22.24■■□□□ 1.15
LIMS2-201ENST00000324938 ZFXP17010 805 aaPredicted RBP22.24■■□□□ 1.15
LIMS2-201ENST00000324938 HHATQ5VTY9 493 aa22.24■■□□□ 1.15
LIMS2-201ENST00000324938 AGGF1Q8N302 714 aaeCLIP22.24■■□□□ 1.15
LIMS2-201ENST00000324938 RMDN2Q96LZ7 410 aa22.24■■□□□ 1.15
LIMS2-201ENST00000324938 DHX35Q9H5Z1 703 aaKnown RBP22.24■■□□□ 1.15
LIMS2-201ENST00000324938 GOLGA2P5Q9HBQ8 144 aa22.24■■□□□ 1.15
LIMS2-201ENST00000324938 RXFP1Q9HBX9 757 aa22.24■■□□□ 1.15
LIMS2-201ENST00000324938 MTMR10Q9NXD2 777 aa22.24■■□□□ 1.15
LIMS2-201ENST00000324938 IPPQ9Y573 584 aa22.24■■□□□ 1.15
LIMS2-201ENST00000324938 ZNF638Q14966 1978 aaKnown RBP22.24■■□□□ 1.15
LIMS2-201ENST00000324938 CRYBB1P53674 252 aaPredicted RBP22.24■■□□□ 1.15
LIMS2-201ENST00000324938 ATXN1P54253 815 aaKnown RBP22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms