RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 MCUQ8NE86 351 aa23.24■■□□□ 1.31
PNKP-201ENST00000322344 LRRC39Q96DD0 335 aa23.24■■□□□ 1.31
PNKP-201ENST00000322344 MAML3Q96JK9 1138 aa23.24■■□□□ 1.31
PNKP-201ENST00000322344 LRRC37BQ96QE4 947 aa23.24■■□□□ 1.31
PNKP-201ENST00000322344 ADAM33Q9BZ11 813 aa23.24■■□□□ 1.31
PNKP-201ENST00000322344 SETD4Q9NVD3 440 aa23.24■■□□□ 1.31
PNKP-201ENST00000322344 ETNK2Q9NVF9 386 aa23.24■■□□□ 1.31
PNKP-201ENST00000322344 BAIAP2L1Q9UHR4 511 aa23.24■■□□□ 1.31
PNKP-201ENST00000322344 VGLL3A8MV65 326 aa23.23■■□□□ 1.31
PNKP-201ENST00000322344 ADRA1DP25100 572 aa23.23■■□□□ 1.31
PNKP-201ENST00000322344 BCAT1P54687 386 aa23.23■■□□□ 1.31
PNKP-201ENST00000322344 YWHAZP63104 245 aaKnown RBP23.23■■□□□ 1.31
PNKP-201ENST00000322344 BST2Q10589 180 aaKnown RBP23.23■■□□□ 1.31
PNKP-201ENST00000322344 GRB14Q14449 540 aa23.23■■□□□ 1.31
PNKP-201ENST00000322344 DPYSL2Q16555 572 aa23.23■■□□□ 1.31
PNKP-201ENST00000322344 KBTBD12Q3ZCT8 623 aa23.23■■□□□ 1.31
PNKP-201ENST00000322344 PREPLQ4J6C6 727 aaPredicted RBP23.23■■□□□ 1.31
PNKP-201ENST00000322344 C9orf57Q5W0N0 161 aa23.23■■□□□ 1.31
PNKP-201ENST00000322344 ALKAL1Q6UXT8 129 aa23.23■■□□□ 1.31
PNKP-201ENST00000322344 C10orf82Q8WW14 230 aa23.23■■□□□ 1.31
PNKP-201ENST00000322344 TSPAN18Q96SJ8 248 aa23.23■■□□□ 1.31
PNKP-201ENST00000322344 MYLK2Q9H1R3 596 aa23.23■■□□□ 1.31
PNKP-201ENST00000322344 NRDE2Q9H7Z3 1164 aa23.23■■□□□ 1.31
PNKP-201ENST00000322344 NME7Q9Y5B8 376 aa23.23■■□□□ 1.31
PNKP-201ENST00000322344 A8MXQ7 604 aa23.23■■□□□ 1.31
PNKP-201ENST00000322344 BTBD19C9JJ37 291 aa23.23■■□□□ 1.31
PNKP-201ENST00000322344 TRDMT1O14717 391 aaKnown RBP23.23■■□□□ 1.31
PNKP-201ENST00000322344 GPR32O75388 356 aa23.23■■□□□ 1.31
PNKP-201ENST00000322344 CD4P01730 458 aa23.23■■□□□ 1.31
PNKP-201ENST00000322344 AXLP30530 894 aa23.23■■□□□ 1.31
PNKP-201ENST00000322344 RPL34P49207 117 aaKnown RBP23.23■■□□□ 1.31
PNKP-201ENST00000322344 GTF2A2P52657 109 aa23.23■■□□□ 1.31
PNKP-201ENST00000322344 SLC18A2Q05940 514 aa23.23■■□□□ 1.31
PNKP-201ENST00000322344 CA9Q16790 459 aa23.23■■□□□ 1.31
PNKP-201ENST00000322344 WLSQ5T9L3 541 aa23.23■■□□□ 1.31
PNKP-201ENST00000322344 OTOAQ7RTW8 1153 aa23.23■■□□□ 1.31
PNKP-201ENST00000322344 GPR142Q7Z601 462 aa23.23■■□□□ 1.31
PNKP-201ENST00000322344 ANKRD52Q8NB46 1076 aa23.23■■□□□ 1.31
PNKP-201ENST00000322344 CENPIQ92674 756 aaPredicted RBP23.23■■□□□ 1.31
PNKP-201ENST00000322344 APOPT1Q96IL0 206 aa23.23■■□□□ 1.31
PNKP-201ENST00000322344 C11orf84Q9BUA3 381 aaPredicted RBP23.23■■□□□ 1.31
PNKP-201ENST00000322344 EIF2AQ9BY44 585 aaKnown RBP23.23■■□□□ 1.31
PNKP-201ENST00000322344 A6NJR5 290 aa23.22■■□□□ 1.31
PNKP-201ENST00000322344 LPXNO60711 386 aa23.22■■□□□ 1.31
PNKP-201ENST00000322344 FAM155BO75949 473 aa23.22■■□□□ 1.31
PNKP-201ENST00000322344 TROVE2P10155 538 aaKnown RBP eCLIP23.22■■□□□ 1.31
PNKP-201ENST00000322344 CYP2F1P24903 491 aa23.22■■□□□ 1.31
PNKP-201ENST00000322344 ACADSBP45954 432 aa23.22■■□□□ 1.31
PNKP-201ENST00000322344 NR2C2P49116 596 aa23.22■■□□□ 1.31
PNKP-201ENST00000322344 MTM1Q13496 603 aa23.22■■□□□ 1.31
PNKP-201ENST00000322344 SOWAHAQ2M3V2 549 aa23.22■■□□□ 1.31
PNKP-201ENST00000322344 ANKRD23Q86SG2 305 aa23.22■■□□□ 1.31
PNKP-201ENST00000322344 SLC26A11Q86WA9 606 aa23.22■■□□□ 1.31
PNKP-201ENST00000322344 CRYBG2Q8N1P7 616 aa23.22■■□□□ 1.31
PNKP-201ENST00000322344 APBB2Q92870 758 aa23.22■■□□□ 1.31
PNKP-201ENST00000322344 ZNF560Q96MR9 790 aa23.22■■□□□ 1.31
PNKP-201ENST00000322344 RAB3IPQ96QF0 476 aaPredicted RBP23.22■■□□□ 1.31
PNKP-201ENST00000322344 TINF2Q9BSI4 451 aa23.22■■□□□ 1.31
PNKP-201ENST00000322344 FAM49AQ9H0Q0 323 aaPredicted RBP23.22■■□□□ 1.31
PNKP-201ENST00000322344 CXCL16Q9H2A7 254 aa23.22■■□□□ 1.31
PNKP-201ENST00000322344 CHKBQ9Y259 395 aa23.22■■□□□ 1.31
PNKP-201ENST00000322344 SMIM35A0A1B0GVV1 85 aa23.21■■□□□ 1.31
PNKP-201ENST00000322344 GABBR2O75899 941 aa23.21■■□□□ 1.31
PNKP-201ENST00000322344 CHSY1Q86X52 802 aa23.21■■□□□ 1.31
PNKP-201ENST00000322344 ZNF276Q8N554 614 aa23.21■■□□□ 1.31
PNKP-201ENST00000322344 C18orf25Q96B23 403 aaPredicted RBP23.21■■□□□ 1.31
PNKP-201ENST00000322344 ERP27Q96DN0 273 aa23.21■■□□□ 1.31
PNKP-201ENST00000322344 MS4A4AQ96JQ5 239 aa23.21■■□□□ 1.31
PNKP-201ENST00000322344 TRIM6Q9C030 488 aaPredicted RBP23.21■■□□□ 1.31
PNKP-201ENST00000322344 ZNF180Q9UJW8 692 aa23.21■■□□□ 1.31
PNKP-201ENST00000322344 NRCAMQ92823 1304 aa23.21■■□□□ 1.31
PNKP-201ENST00000322344 CCL15-CCL14A0A0B4J2E2 113 aa23.21■■□□□ 1.31
PNKP-201ENST00000322344 XPOTO43592 962 aaKnown RBP23.21■■□□□ 1.31
PNKP-201ENST00000322344 L1CAMP32004 1257 aa23.21■■□□□ 1.31
PNKP-201ENST00000322344 PNPLA4P41247 253 aa23.21■■□□□ 1.31
PNKP-201ENST00000322344 NEK3P51956 506 aa23.21■■□□□ 1.31
PNKP-201ENST00000322344 CCL15Q16663 113 aa23.21■■□□□ 1.31
PNKP-201ENST00000322344 SLC45A4Q5BKX6 768 aa23.21■■□□□ 1.31
PNKP-201ENST00000322344 PPP6R3Q5H9R7 873 aaPredicted RBP23.21■■□□□ 1.31
PNKP-201ENST00000322344 TTC39BQ5VTQ0 682 aaPredicted RBP23.21■■□□□ 1.31
PNKP-201ENST00000322344 SPON1Q9HCB6 807 aa23.21■■□□□ 1.31
PNKP-201ENST00000322344 GINS2Q9Y248 185 aa23.21■■□□□ 1.31
PNKP-201ENST00000322344 TTLL3Q9Y4R7 772 aa23.21■■□□□ 1.31
PNKP-201ENST00000322344 C2CD2LO14523 706 aa23.2■■□□□ 1.3
PNKP-201ENST00000322344 GCATO75600 419 aa23.2■■□□□ 1.3
PNKP-201ENST00000322344 RECQL4O94761 1208 aa23.2■■□□□ 1.3
PNKP-201ENST00000322344 DHRS4L1P0CG22 281 aa23.2■■□□□ 1.3
PNKP-201ENST00000322344 DARSP14868 501 aaKnown RBP23.2■■□□□ 1.3
PNKP-201ENST00000322344 EZRP15311 586 aaKnown RBP23.2■■□□□ 1.3
PNKP-201ENST00000322344 FAAP100Q0VG06 881 aa23.2■■□□□ 1.3
PNKP-201ENST00000322344 FBXO47Q5MNV8 452 aa23.2■■□□□ 1.3
PNKP-201ENST00000322344 LGSNQ5TDP6 509 aa23.2■■□□□ 1.3
PNKP-201ENST00000322344 CCDC91Q7Z6B0 441 aa23.2■■□□□ 1.3
PNKP-201ENST00000322344 CFAP36Q96G28 342 aa23.2■■□□□ 1.3
PNKP-201ENST00000322344 HSFY1Q96LI6 401 aa23.2■■□□□ 1.3
PNKP-201ENST00000322344 B3GNT5Q9BYG0 378 aa23.2■■□□□ 1.3
PNKP-201ENST00000322344 MANSC1Q9H8J5 431 aa23.2■■□□□ 1.3
PNKP-201ENST00000322344 ETNK1Q9HBU6 452 aa23.2■■□□□ 1.3
PNKP-201ENST00000322344 POPDC2Q9HBU9 364 aa23.2■■□□□ 1.3
PNKP-201ENST00000322344 ZC3H7BQ9UGR2 993 aaKnown RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms