RNA–Protein interactions for RNA: ENST00000316099.8

HNF4A-201, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HNF4A, Length 6,445 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-201ENST00000316099 CAAP1Q9H8G2 361 aa11.14□□□□□ -0.63
HNF4A-201ENST00000316099 LRCH1Q9Y2L9 728 aa11.14□□□□□ -0.63
HNF4A-201ENST00000316099 NPTXRO95502 500 aa11.14□□□□□ -0.63
HNF4A-201ENST00000316099 LGALS2P05162 132 aa11.14□□□□□ -0.63
HNF4A-201ENST00000316099 PYGLP06737 847 aa11.14□□□□□ -0.63
HNF4A-201ENST00000316099 NFKBIAP25963 317 aa11.14□□□□□ -0.63
HNF4A-201ENST00000316099 CCDC15Q0P6D6 951 aa11.14□□□□□ -0.63
HNF4A-201ENST00000316099 KIZQ2M2Z5 673 aa11.14□□□□□ -0.63
HNF4A-201ENST00000316099 HORMAD1Q86X24 394 aa11.14□□□□□ -0.63
HNF4A-201ENST00000316099 APBB2Q92870 758 aa11.14□□□□□ -0.63
HNF4A-201ENST00000316099 PPP1R36Q96LQ0 422 aa11.14□□□□□ -0.63
HNF4A-201ENST00000316099 PPP1R2P1Q96PQ5 205 aa11.14□□□□□ -0.63
HNF4A-201ENST00000316099 RRN3P2A6NIE6 340 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 MYO1DO94832 1006 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 ICAM3P32942 547 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 RGS2P41220 211 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 KCNJ1P48048 391 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 SP2Q02086 613 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 HSDL1Q3SXM5 330 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 ZC3H12BQ5HYM0 836 aaKnown RBP11.13□□□□□ -0.63
HNF4A-201ENST00000316099 NOP9Q86U38 636 aaKnown RBP11.13□□□□□ -0.63
HNF4A-201ENST00000316099 ATXN7L3BQ96GX2 97 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 TRIM45Q9H8W5 580 aaPredicted RBP11.13□□□□□ -0.63
HNF4A-201ENST00000316099 OSGEPQ9NPF4 335 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 MAFO75444 373 aaPredicted RBP11.13□□□□□ -0.63
HNF4A-201ENST00000316099 THRAP10827 490 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 PDAP1Q13442 181 aaKnown RBP11.13□□□□□ -0.63
HNF4A-201ENST00000316099 PREPLQ4J6C6 727 aaPredicted RBP11.13□□□□□ -0.63
HNF4A-201ENST00000316099 IZUMO2Q6UXV1 221 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 RNF135Q8IUD6 432 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 ARID3BQ8IVW6 561 aaPredicted RBP11.13□□□□□ -0.63
HNF4A-201ENST00000316099 KATNAL1Q9BW62 490 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 SETD4Q9NVD3 440 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 DMGDHQ9UI17 866 aaKnown RBP11.13□□□□□ -0.63
HNF4A-201ENST00000316099 SLC24A2Q9UI40 661 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 DDX3XO00571 662 aaKnown RBP eCLIP11.13□□□□□ -0.631e-41■□□□□ 8.1
HNF4A-201ENST00000316099 GLI1P08151 1106 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 CAPSQ13938 189 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 NFIL3Q16649 462 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 IRGCQ6NXR0 463 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 DAW1Q8N136 415 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 KAT5Q92993 513 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 RBPJLQ9UBG7 517 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 A0A1B0GW55 424 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 GLRA3O75311 464 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 CLPTM1O96005 669 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 ITGB3P05106 788 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 ZCCHC18P0CG32 403 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 DUX4L2P0CJ85 424 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 DUX4L3P0CJ86 424 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 DUX4L4P0CJ87 422 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 DUX4L5P0CJ88 424 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 DUX4L6P0CJ89 424 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 DUX4L7P0CJ90 424 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 PAX7P23759 505 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 HNRNPH3P31942 346 aaKnown RBP11.13□□□□□ -0.63
HNF4A-201ENST00000316099 SLC34A1Q06495 639 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 GRIK4Q16099 956 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 PRAMEF19Q5SWL8 479 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 TRAPPC9Q96Q05 1148 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 KLF6Q99612 283 aaPredicted RBP11.13□□□□□ -0.63
HNF4A-201ENST00000316099 ZNF446Q9NWS9 450 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 DUX4Q9UBX2 424 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 TNS1Q9HBL0 1735 aaKnown RBP11.13□□□□□ -0.63
HNF4A-201ENST00000316099 ATP9BO43861 1147 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 POLBP06746 335 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 RALAP11233 206 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 STX5Q13190 355 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 ACAD10Q6JQN1 1059 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 PPP2R3CQ969Q6 453 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 CATSPER2Q96P56 530 aa11.13□□□□□ -0.63
HNF4A-201ENST00000316099 CDC42EP4Q9H3Q1 356 aaKnown RBP11.13□□□□□ -0.63
HNF4A-201ENST00000316099 MAFBQ9Y5Q3 323 aaPredicted RBP11.13□□□□□ -0.63
HNF4A-201ENST00000316099 GJB1P08034 283 aa11.12□□□□□ -0.63
HNF4A-201ENST00000316099 USP10Q14694 798 aaKnown RBP11.12□□□□□ -0.63
HNF4A-201ENST00000316099 KRT72Q14CN4 511 aa11.12□□□□□ -0.63
HNF4A-201ENST00000316099 THEM5Q8N1Q8 247 aa11.12□□□□□ -0.63
HNF4A-201ENST00000316099 PPP1R13LQ8WUF5 828 aa11.12□□□□□ -0.63
HNF4A-201ENST00000316099 FAM111AQ96PZ2 611 aa11.12□□□□□ -0.63
HNF4A-201ENST00000316099 GPR20Q99678 358 aa11.12□□□□□ -0.63
HNF4A-201ENST00000316099 NIF3L1Q9GZT8 377 aa11.12□□□□□ -0.63
HNF4A-201ENST00000316099 RUBCNLQ9H714 662 aa11.12□□□□□ -0.63
HNF4A-201ENST00000316099 FAM153AQ9UHL3 310 aa11.12□□□□□ -0.63
HNF4A-201ENST00000316099 QSER1Q2KHR3 1735 aa11.12□□□□□ -0.63
HNF4A-201ENST00000316099 ZC3H11AO75152 810 aaKnown RBP eCLIP11.12□□□□□ -0.63
HNF4A-201ENST00000316099 NUDT2P50583 147 aa11.12□□□□□ -0.63
HNF4A-201ENST00000316099 EIF1ADQ8N9N8 165 aaKnown RBP11.12□□□□□ -0.63
HNF4A-201ENST00000316099 ZSWIM2Q8NEG5 633 aa11.12□□□□□ -0.63
HNF4A-201ENST00000316099 TMEM120AQ9BXJ8 343 aa11.12□□□□□ -0.63
HNF4A-201ENST00000316099 ABHD16BQ9H3Z7 469 aa11.12□□□□□ -0.63
HNF4A-201ENST00000316099 TMEM134Q9H6X4 195 aa11.12□□□□□ -0.63
HNF4A-201ENST00000316099 ABCF3Q9NUQ8 709 aa11.12□□□□□ -0.63
HNF4A-201ENST00000316099 NKRFO15226 690 aaKnown RBP eCLIP11.12□□□□□ -0.631e-6■■□□□ 13.9
HNF4A-201ENST00000316099 STAG3L1P0CL83 205 aa11.12□□□□□ -0.63
HNF4A-201ENST00000316099 HLA-DPA1P20036 260 aa11.12□□□□□ -0.63
HNF4A-201ENST00000316099 FSTL1Q12841 308 aa11.12□□□□□ -0.63
HNF4A-201ENST00000316099 OVGP1Q12889 678 aa11.12□□□□□ -0.63
HNF4A-201ENST00000316099 LBRQ14739 615 aaKnown RBP11.12□□□□□ -0.63
HNF4A-201ENST00000316099 C2CD6Q53TS8 623 aa11.12□□□□□ -0.63
HNF4A-201ENST00000316099 EFHC1Q5JVL4 640 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms