RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 C11orf44Q8N8P7 122 aa4.6□□□□□ -1.67
SMCO3-201ENST00000316048 NACC2Q96BF6 587 aa4.6□□□□□ -1.67
SMCO3-201ENST00000316048 KCNC2Q96PR1 638 aa4.6□□□□□ -1.67
SMCO3-201ENST00000316048 PTDSS2Q9BVG9 487 aa4.6□□□□□ -1.67
SMCO3-201ENST00000316048 TRIM5Q9C035 493 aa4.6□□□□□ -1.67
SMCO3-201ENST00000316048 FAM83DQ9H4H8 585 aa4.6□□□□□ -1.67
SMCO3-201ENST00000316048 ZNF768Q9H5H4 540 aaKnown RBP4.6□□□□□ -1.67
SMCO3-201ENST00000316048 MSL2Q9HCI7 577 aa4.6□□□□□ -1.67
SMCO3-201ENST00000316048 TRPM5Q9NZQ8 1165 aa4.6□□□□□ -1.67
SMCO3-201ENST00000316048 EIF2B4Q9UI10 523 aaKnown RBP4.6□□□□□ -1.67
SMCO3-201ENST00000316048 KNSTRNQ9Y448 316 aa4.6□□□□□ -1.67
SMCO3-201ENST00000316048 ADGRB3O60242 1522 aa4.6□□□□□ -1.67
SMCO3-201ENST00000316048 AGLP35573 1532 aa4.6□□□□□ -1.67
SMCO3-201ENST00000316048 REREQ9P2R6 1566 aa4.6□□□□□ -1.67
SMCO3-201ENST00000316048 NPEPPSL1A6NEC2 478 aa4.6□□□□□ -1.67
SMCO3-201ENST00000316048 OR2W5A6NFC9 320 aa4.6□□□□□ -1.67
SMCO3-201ENST00000316048 PRSS47A8MTI9 375 aa4.6□□□□□ -1.67
SMCO3-201ENST00000316048 AHRRA9YTQ3 701 aa4.6□□□□□ -1.67
SMCO3-201ENST00000316048 ZSCAN9O15535 394 aaPredicted RBP4.6□□□□□ -1.67
SMCO3-201ENST00000316048 MBD4O95243 580 aa4.6□□□□□ -1.67
SMCO3-201ENST00000316048 GLP2RO95838 553 aa4.6□□□□□ -1.67
SMCO3-201ENST00000316048 CCR5P51681 352 aa4.6□□□□□ -1.67
SMCO3-201ENST00000316048 PGDP52209 483 aa4.6□□□□□ -1.67
SMCO3-201ENST00000316048 JAG1P78504 1218 aa4.6□□□□□ -1.67
SMCO3-201ENST00000316048 ATP1A4Q13733 1029 aa4.6□□□□□ -1.67
SMCO3-201ENST00000316048 CCDC184Q52MB2 194 aa4.6□□□□□ -1.67
SMCO3-201ENST00000316048 ANKRD45Q5TZF3 282 aa4.6□□□□□ -1.67
SMCO3-201ENST00000316048 SPOCD1Q6ZMY3 1216 aa4.6□□□□□ -1.67
SMCO3-201ENST00000316048 Q6ZSN1 163 aa4.6□□□□□ -1.67
SMCO3-201ENST00000316048 HTR3DQ70Z44 454 aa4.6□□□□□ -1.67
SMCO3-201ENST00000316048 KRT73Q86Y46 540 aa4.6□□□□□ -1.67
SMCO3-201ENST00000316048 SLC15A3Q8IY34 581 aa4.6□□□□□ -1.67
SMCO3-201ENST00000316048 NME8Q8N427 588 aa4.6□□□□□ -1.67
SMCO3-201ENST00000316048 THAP4Q8WY91 577 aa4.6□□□□□ -1.67
SMCO3-201ENST00000316048 COG8Q96MW5 612 aa4.6□□□□□ -1.67
SMCO3-201ENST00000316048 SEC62Q99442 399 aaKnown RBP4.6□□□□□ -1.67
SMCO3-201ENST00000316048 REXO4Q9GZR2 422 aaKnown RBP4.6□□□□□ -1.67
SMCO3-201ENST00000316048 VPS16Q9H269 839 aa4.6□□□□□ -1.67
SMCO3-201ENST00000316048 DNAJB11Q9UBS4 358 aa4.6□□□□□ -1.67
SMCO3-201ENST00000316048 SORCS3Q9UPU3 1222 aa4.6□□□□□ -1.67
SMCO3-201ENST00000316048 DISP3Q9P2K9 1392 aa4.6□□□□□ -1.67
SMCO3-201ENST00000316048 NRXN1Q9ULB1 1477 aa4.6□□□□□ -1.67
SMCO3-201ENST00000316048 CFAP65Q6ZU64 1925 aaKnown RBP4.59□□□□□ -1.67
SMCO3-201ENST00000316048 FAM90A18PA6NE21 464 aa4.59□□□□□ -1.67
SMCO3-201ENST00000316048 FAM90A16PA6NEW6 464 aa4.59□□□□□ -1.67
SMCO3-201ENST00000316048 FAM90A9PA6NNJ1 464 aa4.59□□□□□ -1.67
SMCO3-201ENST00000316048 GRXCR1A8MXD5 290 aa4.59□□□□□ -1.67
SMCO3-201ENST00000316048 FAM90A5PA8MXJ8 464 aa4.59□□□□□ -1.67
SMCO3-201ENST00000316048 KIF28PB7ZC32 967 aa4.59□□□□□ -1.67
SMCO3-201ENST00000316048 BRD4O60885 1362 aaPredicted RBP4.59□□□□□ -1.67
SMCO3-201ENST00000316048 RPS6KA4O75676 772 aa4.59□□□□□ -1.67
SMCO3-201ENST00000316048 RPP40O75818 363 aaKnown RBP4.59□□□□□ -1.67
SMCO3-201ENST00000316048 KRT38O76015 456 aa4.59□□□□□ -1.67
SMCO3-201ENST00000316048 CYP21A2P08686 494 aa4.59□□□□□ -1.67
SMCO3-201ENST00000316048 FAM90A15PP0C7V4 464 aa4.59□□□□□ -1.67
SMCO3-201ENST00000316048 FAM90A14PP0C7W9 464 aa4.59□□□□□ -1.67
SMCO3-201ENST00000316048 SLC5A2P31639 672 aa4.59□□□□□ -1.67
SMCO3-201ENST00000316048 HTR7P34969 479 aa4.59□□□□□ -1.67
SMCO3-201ENST00000316048 IQGAP1P46940 1657 aa4.59□□□□□ -1.67
SMCO3-201ENST00000316048 NPTX2P47972 431 aa4.59□□□□□ -1.67
SMCO3-201ENST00000316048 ANXA11P50995 505 aaKnown RBP4.59□□□□□ -1.67
SMCO3-201ENST00000316048 TRIM71Q2Q1W2 868 aaKnown RBP4.59□□□□□ -1.67
SMCO3-201ENST00000316048 ADCK5Q3MIX3 580 aa4.59□□□□□ -1.67
SMCO3-201ENST00000316048 NAIF1Q69YI7 327 aaPredicted RBP4.59□□□□□ -1.67
SMCO3-201ENST00000316048 RETSATQ6NUM9 610 aa4.59□□□□□ -1.67
SMCO3-201ENST00000316048 RSRC2Q7L4I2 434 aaKnown RBP4.59□□□□□ -1.67
SMCO3-201ENST00000316048 RASGRP2Q7LDG7 609 aa4.59□□□□□ -1.67
SMCO3-201ENST00000316048 GSPT2Q8IYD1 628 aaKnown RBP4.59□□□□□ -1.67
SMCO3-201ENST00000316048 BHLHE22Q8NFJ8 381 aaPredicted RBP4.59□□□□□ -1.67
SMCO3-201ENST00000316048 SLC30A5Q8TAD4 765 aa4.59□□□□□ -1.67
SMCO3-201ENST00000316048 MAELQ96JY0 434 aaKnown RBP4.59□□□□□ -1.67
SMCO3-201ENST00000316048 TRAPPC9Q96Q05 1148 aa4.59□□□□□ -1.67
SMCO3-201ENST00000316048 KCND3Q9UK17 655 aa4.59□□□□□ -1.67
SMCO3-201ENST00000316048 SETD1BQ9UPS6 1966 aaKnown RBP4.59□□□□□ -1.67
SMCO3-201ENST00000316048 IFT172Q9UG01 1749 aa4.59□□□□□ -1.68
SMCO3-201ENST00000316048 SETBP1Q9Y6X0 1596 aa4.59□□□□□ -1.68
SMCO3-201ENST00000316048 ZFYVE9O95405 1425 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 CENPJQ9HC77 1338 aaPredicted RBP4.58□□□□□ -1.68
SMCO3-201ENST00000316048 PRAMEF33A0A0G2JMD5 474 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 F5H697 171 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 PRICKLE3O43900 615 aaPredicted RBP4.58□□□□□ -1.68
SMCO3-201ENST00000316048 CCNT2O60583 730 aaKnown RBP4.58□□□□□ -1.68
SMCO3-201ENST00000316048 PRAMEF10O60809 474 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 RECQL4O94761 1208 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 PEPDP12955 493 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 GATA3P23771 443 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 UQCRC1P31930 480 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 DYRK1AQ13627 763 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 CLEC9AQ6UXN8 241 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 C1orf122Q6ZSJ8 110 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 GDF7Q7Z4P5 450 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 POLNQ7Z5Q5 900 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 METTL25Q8N6Q8 603 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 POU5F2Q8N7G0 328 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 HTRA1Q92743 480 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 HIST1H2AAQ96QV6 131 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 HAPLN3Q96S86 360 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 RBM15Q96T37 977 aaKnown RBP eCLIP4.58□□□□□ -1.68
SMCO3-201ENST00000316048 MECRQ9BV79 373 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 SSBP3Q9BWW4 388 aaPredicted RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 174.9 ms