RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 SGO2Q562F6 1265 aa15.36■□□□□ 0.05
PPP1CA-201ENST00000312989 LY6G5CQ5SRR4 150 aa15.36■□□□□ 0.05
PPP1CA-201ENST00000312989 GJB7Q6PEY0 223 aa15.36■□□□□ 0.05
PPP1CA-201ENST00000312989 ZC3H14Q6PJT7 736 aaKnown RBP15.36■□□□□ 0.05
PPP1CA-201ENST00000312989 UBA3Q8TBC4 463 aa15.36■□□□□ 0.05
PPP1CA-201ENST00000312989 SLC35F5Q8WV83 523 aa15.36■□□□□ 0.05
PPP1CA-201ENST00000312989 KCTD13Q8WZ19 329 aa15.36■□□□□ 0.05
PPP1CA-201ENST00000312989 OTUB2Q96DC9 234 aa15.36■□□□□ 0.05
PPP1CA-201ENST00000312989 ULBP1Q9BZM6 244 aa15.36■□□□□ 0.05
PPP1CA-201ENST00000312989 NUP62CLQ9H1M0 184 aa15.36■□□□□ 0.05
PPP1CA-201ENST00000312989 AJAP1Q9UKB5 411 aaPredicted RBP15.36■□□□□ 0.05
PPP1CA-201ENST00000312989 HCN2Q9UL51 889 aa15.36■□□□□ 0.05
PPP1CA-201ENST00000312989 RIF1Q5UIP0 2472 aaKnown RBP15.35■□□□□ 0.05
PPP1CA-201ENST00000312989 DNAH14Q0VDD8 3507 aa15.35■□□□□ 0.05
PPP1CA-201ENST00000312989 A0A0A0MRY4 1105 aa15.35■□□□□ 0.05
PPP1CA-201ENST00000312989 BECN2A8MW95 431 aa15.35■□□□□ 0.05
PPP1CA-201ENST00000312989 SLC9A3R1O14745 358 aaPredicted RBP15.35■□□□□ 0.05
PPP1CA-201ENST00000312989 STC2O76061 302 aa15.35■□□□□ 0.05
PPP1CA-201ENST00000312989 CCDC192P0DO97 292 aa15.35■□□□□ 0.05
PPP1CA-201ENST00000312989 IRF1P10914 325 aa15.35■□□□□ 0.05
PPP1CA-201ENST00000312989 TRIM21P19474 475 aaKnown RBP15.35■□□□□ 0.05
PPP1CA-201ENST00000312989 BRD2P25440 801 aaKnown RBP15.35■□□□□ 0.05
PPP1CA-201ENST00000312989 ATP5C1P36542 298 aaKnown RBP15.35■□□□□ 0.05
PPP1CA-201ENST00000312989 EIF2DP41214 584 aaKnown RBP15.35■□□□□ 0.05
PPP1CA-201ENST00000312989 RPL34P49207 117 aaKnown RBP15.35■□□□□ 0.05
PPP1CA-201ENST00000312989 TKTL1P51854 596 aa15.35■□□□□ 0.05
PPP1CA-201ENST00000312989 YWHAEP62258 255 aaKnown RBP15.35■□□□□ 0.05
PPP1CA-201ENST00000312989 AMPD2Q01433 879 aa15.35■□□□□ 0.05
PPP1CA-201ENST00000312989 BST2Q10589 180 aaKnown RBP15.35■□□□□ 0.05
PPP1CA-201ENST00000312989 MIIPQ5JXC2 388 aa15.35■□□□□ 0.05
PPP1CA-201ENST00000312989 PMF1Q6P1K2 205 aa15.35■□□□□ 0.05
PPP1CA-201ENST00000312989 TRIM65Q6PJ69 517 aa15.35■□□□□ 0.05
PPP1CA-201ENST00000312989 TMEM25Q86YD3 366 aa15.35■□□□□ 0.05
PPP1CA-201ENST00000312989 RBBP8NLQ8NC74 664 aaPredicted RBP15.35■□□□□ 0.05
PPP1CA-201ENST00000312989 SIX2Q9NPC8 291 aa15.35■□□□□ 0.05
PPP1CA-201ENST00000312989 TBC1D14Q9P2M4 693 aa15.35■□□□□ 0.05
PPP1CA-201ENST00000312989 NAGPAQ9UK23 515 aa15.35■□□□□ 0.05
PPP1CA-201ENST00000312989 KIAA1257Q9ULG3 409 aa15.35■□□□□ 0.05
PPP1CA-201ENST00000312989 PCDHB4Q9Y5E5 795 aa15.35■□□□□ 0.05
PPP1CA-201ENST00000312989 HRO43593 1189 aa15.34■□□□□ 0.05
PPP1CA-201ENST00000312989 SETSIPP0DME0 302 aa15.34■□□□□ 0.05
PPP1CA-201ENST00000312989 CD19P15391 556 aa15.34■□□□□ 0.05
PPP1CA-201ENST00000312989 SLC9A1P19634 815 aa15.34■□□□□ 0.05
PPP1CA-201ENST00000312989 FNTBP49356 437 aa15.34■□□□□ 0.05
PPP1CA-201ENST00000312989 PSEN1P49768 467 aa15.34■□□□□ 0.05
PPP1CA-201ENST00000312989 SRSF5Q13243 272 aaKnown RBP15.34■□□□□ 0.05
PPP1CA-201ENST00000312989 CNGA2Q16280 664 aa15.34■□□□□ 0.05
PPP1CA-201ENST00000312989 FBXO43Q4G163 708 aa15.34■□□□□ 0.05
PPP1CA-201ENST00000312989 SCML4Q8N228 414 aa15.34■□□□□ 0.05
PPP1CA-201ENST00000312989 USP33Q8TEY7 942 aa15.34■□□□□ 0.05
PPP1CA-201ENST00000312989 ACP6Q9NPH0 428 aa15.34■□□□□ 0.05
PPP1CA-201ENST00000312989 MARK1Q9P0L2 795 aa15.34■□□□□ 0.05
PPP1CA-201ENST00000312989 SH3BP1Q9Y3L3 701 aa15.34■□□□□ 0.05
PPP1CA-201ENST00000312989 MYO16Q9Y6X6 1858 aa15.33■□□□□ 0.04
PPP1CA-201ENST00000312989 GTPBP10A4D1E9 387 aaKnown RBP15.33■□□□□ 0.04
PPP1CA-201ENST00000312989 YJEFN3A6XGL0 299 aa15.33■□□□□ 0.04
PPP1CA-201ENST00000312989 E7ENQ6 273 aa15.33■□□□□ 0.04
PPP1CA-201ENST00000312989 TRIM24O15164 1050 aa15.33■□□□□ 0.04
PPP1CA-201ENST00000312989 ZBED1O96006 694 aa15.33■□□□□ 0.04
PPP1CA-201ENST00000312989 ADH5P11766 374 aa15.33■□□□□ 0.04
PPP1CA-201ENST00000312989 HNRNPLP14866 589 aaKnown RBP eCLIP15.33■□□□□ 0.04
PPP1CA-201ENST00000312989 TGM1P22735 817 aa15.33■□□□□ 0.04
PPP1CA-201ENST00000312989 ERCC5P28715 1186 aaPredicted RBP15.33■□□□□ 0.04
PPP1CA-201ENST00000312989 KIR2DL1P43626 348 aaPredicted RBP15.33■□□□□ 0.04
PPP1CA-201ENST00000312989 DAOAP59103 153 aa15.33■□□□□ 0.04
PPP1CA-201ENST00000312989 YWHAGP61981 247 aaKnown RBP eCLIP15.33■□□□□ 0.04
PPP1CA-201ENST00000312989 ADIGQ0VDE8 80 aa15.33■□□□□ 0.04
PPP1CA-201ENST00000312989 NR1H3Q13133 447 aa15.33■□□□□ 0.04
PPP1CA-201ENST00000312989 WDR5BQ86VZ2 330 aa15.33■□□□□ 0.04
PPP1CA-201ENST00000312989 DCLK2Q8N568 766 aa15.33■□□□□ 0.04
PPP1CA-201ENST00000312989 RPLP0P6Q8NHW5 317 aa15.33■□□□□ 0.04
PPP1CA-201ENST00000312989 SECISBP2LQ93073 1101 aaKnown RBP15.33■□□□□ 0.04
PPP1CA-201ENST00000312989 CRACR2AQ9BSW2 395 aa15.33■□□□□ 0.04
PPP1CA-201ENST00000312989 THAP9Q9H5L6 903 aa15.33■□□□□ 0.04
PPP1CA-201ENST00000312989 SPHK2Q9NRA0 654 aa15.33■□□□□ 0.04
PPP1CA-201ENST00000312989 DNMT3LQ9UJW3 386 aa15.33■□□□□ 0.04
PPP1CA-201ENST00000312989 KIAA1549LQ6ZVL6 1849 aa15.32■□□□□ 0.04
PPP1CA-201ENST00000312989 GFRA2O00451 464 aa15.32■□□□□ 0.04
PPP1CA-201ENST00000312989 FGFR1OPO95684 399 aaKnown RBP15.32■□□□□ 0.04
PPP1CA-201ENST00000312989 ADH1CP00326 375 aa15.32■□□□□ 0.04
PPP1CA-201ENST00000312989 PON1P27169 355 aa15.32■□□□□ 0.04
PPP1CA-201ENST00000312989 GPD2P43304 727 aa15.32■□□□□ 0.04
PPP1CA-201ENST00000312989 CETN1Q12798 172 aa15.32■□□□□ 0.04
PPP1CA-201ENST00000312989 C10orf120Q5SQS8 335 aa15.32■□□□□ 0.04
PPP1CA-201ENST00000312989 SYT13Q7L8C5 426 aa15.32■□□□□ 0.04
PPP1CA-201ENST00000312989 LONP2Q86WA8 852 aa15.32■□□□□ 0.04
PPP1CA-201ENST00000312989 CLEC4CQ8WTT0 213 aa15.32■□□□□ 0.04
PPP1CA-201ENST00000312989 ATRIPQ8WXE1 791 aa15.32■□□□□ 0.04
PPP1CA-201ENST00000312989 DNAI2Q9GZS0 605 aa15.32■□□□□ 0.04
PPP1CA-201ENST00000312989 CYTH4Q9UIA0 394 aa15.32■□□□□ 0.04
PPP1CA-201ENST00000312989 SMG5Q9UPR3 1016 aaKnown RBP15.32■□□□□ 0.04
PPP1CA-201ENST00000312989 EP300Q09472 2414 aaPredicted RBP15.32■□□□□ 0.04
PPP1CA-201ENST00000312989 FAM186AA6NE01 2351 aa15.32■□□□□ 0.04
PPP1CA-201ENST00000312989 M0QYV0 167 aa15.31■□□□□ 0.04
PPP1CA-201ENST00000312989 TULP3O75386 442 aa15.31■□□□□ 0.04
PPP1CA-201ENST00000312989 KAT7O95251 611 aa15.31■□□□□ 0.04
PPP1CA-201ENST00000312989 FYNP06241 537 aa15.31■□□□□ 0.04
PPP1CA-201ENST00000312989 PXNP49023 591 aaPredicted RBP15.31■□□□□ 0.04
PPP1CA-201ENST00000312989 RGS7P49802 495 aa15.31■□□□□ 0.04
PPP1CA-201ENST00000312989 NRLP54845 237 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms