RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 PRPF39Q86UA1 669 aaKnown RBP19.61■□□□□ 0.73
HERPUD2-201ENST00000311350 CPXCR1Q8N123 301 aa19.61■□□□□ 0.73
HERPUD2-201ENST00000311350 ABTB1Q969K4 478 aaPredicted RBP19.61■□□□□ 0.73
HERPUD2-201ENST00000311350 PTPN18Q99952 460 aa19.61■□□□□ 0.73
HERPUD2-201ENST00000311350 TMEM121Q9BTD3 319 aa19.61■□□□□ 0.73
HERPUD2-201ENST00000311350 POLR3FQ9H1D9 316 aaPredicted RBP19.61■□□□□ 0.73
HERPUD2-201ENST00000311350 CYP26B1Q9NR63 512 aa19.61■□□□□ 0.73
HERPUD2-201ENST00000311350 hCG_1818297A0A087WSY0 165 aa19.6■□□□□ 0.73
HERPUD2-201ENST00000311350 UQCRBP14927 111 aa19.6■□□□□ 0.73
HERPUD2-201ENST00000311350 ALDH18A1P54886 795 aaKnown RBP19.6■□□□□ 0.73
HERPUD2-201ENST00000311350 HPCAP84074 193 aa19.6■□□□□ 0.73
HERPUD2-201ENST00000311350 NOL9Q5SY16 702 aaKnown RBP19.6■□□□□ 0.73
HERPUD2-201ENST00000311350 C6orf163Q5TEZ5 329 aa19.6■□□□□ 0.73
HERPUD2-201ENST00000311350 TMEM270Q6UE05 265 aa19.6■□□□□ 0.73
HERPUD2-201ENST00000311350 MFSD7Q6UXD7 560 aa19.6■□□□□ 0.73
HERPUD2-201ENST00000311350 RBM44Q6ZP01 1051 aaKnown RBP19.6■□□□□ 0.73
HERPUD2-201ENST00000311350 FAM172AQ8WUF8 416 aa19.6■□□□□ 0.73
HERPUD2-201ENST00000311350 SNRNP27Q8WVK2 155 aaKnown RBP19.6■□□□□ 0.73
HERPUD2-201ENST00000311350 ALKBH8Q96BT7 664 aaKnown RBP19.6■□□□□ 0.73
HERPUD2-201ENST00000311350 SMYD3Q9H7B4 428 aa19.6■□□□□ 0.73
HERPUD2-201ENST00000311350 S100A14Q9HCY8 104 aa19.6■□□□□ 0.73
HERPUD2-201ENST00000311350 MAGEB3O15480 346 aa19.6■□□□□ 0.73
HERPUD2-201ENST00000311350 TGDSO95455 350 aa19.6■□□□□ 0.73
HERPUD2-201ENST00000311350 PHBP35232 272 aa19.6■□□□□ 0.73
HERPUD2-201ENST00000311350 PPIL2Q13356 520 aa19.6■□□□□ 0.73
HERPUD2-201ENST00000311350 UBAP2LQ14157 1087 aaKnown RBP19.6■□□□□ 0.73
HERPUD2-201ENST00000311350 GRM2Q14416 872 aa19.6■□□□□ 0.73
HERPUD2-201ENST00000311350 PIGHQ14442 188 aaPredicted RBP19.6■□□□□ 0.73
HERPUD2-201ENST00000311350 TMCO4Q5TGY1 634 aa19.6■□□□□ 0.73
HERPUD2-201ENST00000311350 DUS1LQ6P1R4 473 aaKnown RBP19.6■□□□□ 0.73
HERPUD2-201ENST00000311350 HIPK4Q8NE63 616 aa19.6■□□□□ 0.73
HERPUD2-201ENST00000311350 PYROXD1Q8WU10 500 aa19.6■□□□□ 0.73
HERPUD2-201ENST00000311350 BRI3BPQ8WY22 251 aa19.6■□□□□ 0.73
HERPUD2-201ENST00000311350 PHF12Q96QT6 1004 aa19.6■□□□□ 0.73
HERPUD2-201ENST00000311350 DHRS4Q9BTZ2 278 aa19.6■□□□□ 0.73
HERPUD2-201ENST00000311350 ZNF518BQ9C0D4 1074 aa19.6■□□□□ 0.73
HERPUD2-201ENST00000311350 PCDHGB4Q9UN71 923 aa19.6■□□□□ 0.73
HERPUD2-201ENST00000311350 PCDHGB5Q9Y5G0 923 aa19.6■□□□□ 0.73
HERPUD2-201ENST00000311350 CASP8AP2Q9UKL3 1982 aa19.59■□□□□ 0.73
HERPUD2-201ENST00000311350 CCL15-CCL14A0A0B4J2E2 113 aa19.59■□□□□ 0.73
HERPUD2-201ENST00000311350 PRR5-ARHGAP8B1AHC4 643 aa19.59■□□□□ 0.73
HERPUD2-201ENST00000311350 GPR25O00155 361 aa19.59■□□□□ 0.73
HERPUD2-201ENST00000311350 KCNA2P16389 499 aa19.59■□□□□ 0.73
HERPUD2-201ENST00000311350 AP3M2P53677 418 aa19.59■□□□□ 0.73
HERPUD2-201ENST00000311350 NLRP11P59045 1033 aaKnown RBP19.59■□□□□ 0.73
HERPUD2-201ENST00000311350 ARHGAP8P85298 464 aa19.59■□□□□ 0.73
HERPUD2-201ENST00000311350 SLC25A3Q00325 362 aa19.59■□□□□ 0.73
HERPUD2-201ENST00000311350 ASPHQ12797 758 aa19.59■□□□□ 0.73
HERPUD2-201ENST00000311350 PDK3Q15120 406 aa19.59■□□□□ 0.73
HERPUD2-201ENST00000311350 CCL15Q16663 113 aa19.59■□□□□ 0.73
HERPUD2-201ENST00000311350 TFDP3Q5H9I0 405 aa19.59■□□□□ 0.73
HERPUD2-201ENST00000311350 C1QTNF12Q5T7M4 302 aa19.59■□□□□ 0.73
HERPUD2-201ENST00000311350 DHDDSQ86SQ9 333 aa19.59■□□□□ 0.73
HERPUD2-201ENST00000311350 CDHR1Q96JP9 859 aa19.59■□□□□ 0.73
HERPUD2-201ENST00000311350 FARP1Q9Y4F1 1045 aaPredicted RBP19.59■□□□□ 0.73
HERPUD2-201ENST00000311350 A0A088AWK7 358 aa19.59■□□□□ 0.73
HERPUD2-201ENST00000311350 SPECC1L-ADORA2AF8WAN1 911 aa19.59■□□□□ 0.73
HERPUD2-201ENST00000311350 CAPN15O75808 1086 aa19.59■□□□□ 0.73
HERPUD2-201ENST00000311350 TMCC1O94876 653 aa19.59■□□□□ 0.73
HERPUD2-201ENST00000311350 MT-ND3P03897 115 aa19.59■□□□□ 0.73
HERPUD2-201ENST00000311350 DHRS4L1P0CG22 281 aa19.59■□□□□ 0.73
HERPUD2-201ENST00000311350 SPOPLQ6IQ16 392 aa19.59■□□□□ 0.73
HERPUD2-201ENST00000311350 CDHR3Q6ZTQ4 885 aa19.59■□□□□ 0.73
HERPUD2-201ENST00000311350 POLNQ7Z5Q5 900 aa19.59■□□□□ 0.73
HERPUD2-201ENST00000311350 PASD1Q8IV76 773 aa19.59■□□□□ 0.73
HERPUD2-201ENST00000311350 SLC35B2Q8TB61 432 aa19.59■□□□□ 0.73
HERPUD2-201ENST00000311350 ZNF296Q8WUU4 475 aaPredicted RBP19.59■□□□□ 0.73
HERPUD2-201ENST00000311350 R3HDMLQ9H3Y0 253 aa19.59■□□□□ 0.73
HERPUD2-201ENST00000311350 CCDC195A0A1B0GUA6 201 aa19.58■□□□□ 0.73
HERPUD2-201ENST00000311350 SPDYE16A6NNV3 312 aaPredicted RBP19.58■□□□□ 0.73
HERPUD2-201ENST00000311350 SMIM18P0DKX4 95 aa19.58■□□□□ 0.73
HERPUD2-201ENST00000311350 DESP17661 470 aa19.58■□□□□ 0.73
HERPUD2-201ENST00000311350 SOX10P56693 466 aa19.58■□□□□ 0.73
HERPUD2-201ENST00000311350 DGKZQ13574 1117 aa19.58■□□□□ 0.73
HERPUD2-201ENST00000311350 HIF1AQ16665 826 aa19.58■□□□□ 0.73
HERPUD2-201ENST00000311350 XKR3Q5GH77 459 aa19.58■□□□□ 0.73
HERPUD2-201ENST00000311350 RHPN2Q8IUC4 686 aa19.58■□□□□ 0.73
HERPUD2-201ENST00000311350 ARID3BQ8IVW6 561 aaPredicted RBP19.58■□□□□ 0.73
HERPUD2-201ENST00000311350 EFCAB3Q8N7B9 438 aa19.58■□□□□ 0.73
HERPUD2-201ENST00000311350 FBXO36Q8NEA4 188 aa19.58■□□□□ 0.73
HERPUD2-201ENST00000311350 GDPD5Q8WTR4 605 aa19.58■□□□□ 0.73
HERPUD2-201ENST00000311350 MAF1Q9H063 256 aa19.58■□□□□ 0.73
HERPUD2-201ENST00000311350 RBAKQ9NYW8 714 aaPredicted RBP19.58■□□□□ 0.73
HERPUD2-201ENST00000311350 SAE1Q9UBE0 346 aaPredicted RBP19.58■□□□□ 0.73
HERPUD2-201ENST00000311350 TAGLN3Q9UI15 199 aa19.58■□□□□ 0.73
HERPUD2-201ENST00000311350 CTDP1Q9Y5B0 961 aaPredicted RBP19.58■□□□□ 0.73
HERPUD2-201ENST00000311350 CCDC160A6NGH7 325 aa19.58■□□□□ 0.72
HERPUD2-201ENST00000311350 ARHGAP42A6NI28 874 aa19.58■□□□□ 0.72
HERPUD2-201ENST00000311350 CDH5P33151 784 aaPredicted RBP19.58■□□□□ 0.72
HERPUD2-201ENST00000311350 CDKN2BP42772 138 aa19.58■□□□□ 0.72
HERPUD2-201ENST00000311350 PRKCEQ02156 737 aa19.58■□□□□ 0.72
HERPUD2-201ENST00000311350 SNAPC2Q13487 334 aa19.58■□□□□ 0.72
HERPUD2-201ENST00000311350 KLHL38Q2WGJ6 581 aa19.58■□□□□ 0.72
HERPUD2-201ENST00000311350 MMEL1Q495T6 779 aa19.58■□□□□ 0.72
HERPUD2-201ENST00000311350 RALGPS1Q5JS13 557 aa19.58■□□□□ 0.72
HERPUD2-201ENST00000311350 TRMT1LQ7Z2T5 733 aaKnown RBP19.58■□□□□ 0.72
HERPUD2-201ENST00000311350 ATP11CQ8NB49 1132 aa19.58■□□□□ 0.72
HERPUD2-201ENST00000311350 SLC26A7Q8TE54 656 aa19.58■□□□□ 0.72
HERPUD2-201ENST00000311350 ZNF606Q8WXB4 792 aa19.58■□□□□ 0.72
HERPUD2-201ENST00000311350 MCOLN1Q9GZU1 580 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms