RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 LRRC53A6NM62 1247 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 H0Y3Z8 333 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 MAN1A2O60476 641 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 TPBGLP0DKB5 382 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 KCNA2P16389 499 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 LAG3P18627 525 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 OAS2P29728 719 aaKnown RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 ALDH5A1P51649 535 aaPredicted RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 CXCL9Q07325 125 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 NSUN2Q08J23 767 aaKnown RBP eCLIP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 SNCBQ16143 134 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 ADCK2Q7Z695 626 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 MTMR14Q8NCE2 650 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 RP9Q8TA86 221 aaKnown RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 ANKRD7Q92527 254 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 MAML1Q92585 1016 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 TMEM176AQ96HP8 235 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 OMDQ99983 421 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 RRAGCQ9HB90 399 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 SAMSN1Q9NSI8 373 aaKnown RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 DNMT3LQ9UJW3 386 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 ATP11BQ9Y2G3 1177 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 ZBTB12Q9Y330 459 aaPredicted RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 NEDD4P46934 1319 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 COL1A1P02452 1464 aaPredicted RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 GLTPD2A6NH11 291 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 DUSP11O75319 330 aaKnown RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 MLYCDO95822 493 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 MOCS2O96007 188 aaPredicted RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 TMEM253P0C7T8 217 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 CTSEP14091 401 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 TCF3P15923 654 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 DDX6P26196 483 aaKnown RBP eCLIP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 SKIV2L2P42285 1042 aaKnown RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 PMS2P54278 862 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 PTPN11Q06124 597 aaPredicted RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 RUNX1T1Q06455 604 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 ZNF268Q14587 947 aaPredicted RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 PLCL1Q15111 1095 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 ACAD10Q6JQN1 1059 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 ATG9AQ7Z3C6 839 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 CGRRF1Q99675 332 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 POLR1EQ9GZS1 481 aaKnown RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 IL22Q9GZX6 179 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 TMEM245Q9H330 911 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 XPO7Q9UIA9 1087 aaKnown RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 MGAT4DA6NG13 374 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 H3BM21 787 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 CCNDBP1O95273 360 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 MYCP01106 439 aaPredicted RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 KRT6AP02538 564 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 KRT6BP04259 564 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 MYL2P10916 166 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 OGNP20774 298 aaKnown RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 KRT6CP48668 564 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 PRIM2P49643 509 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 CRYBB1P53674 252 aaPredicted RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 YWHAZP63104 245 aaKnown RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 LRRC74AQ0VAA2 488 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 DNAJC3Q13217 504 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 TEAD4Q15561 434 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 ANKRD40Q6AI12 368 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 FBXL19Q6PCT2 694 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 OTOAQ7RTW8 1153 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 GJD3Q8N144 294 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 SRFBP1Q8NEF9 429 aaKnown RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 MOSPD2Q8NHP6 518 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 OLFM3Q96PB7 478 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 OSBPL8Q9BZF1 889 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 AGPAT3Q9NRZ7 376 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 ATAD3AQ9NVI7 634 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 ABI3Q9P2A4 366 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 VPS28Q9UK41 221 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 NWD2Q9ULI1 1742 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 SMIM35A0A1B0GVV1 85 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 SAC3D1A6NKF1 404 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 OR6C75A6NL08 312 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 H3BNH8 94 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 ZBTB14O43829 449 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 NMT2O60551 498 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 TDP2O95551 362 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 ACSL3O95573 720 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 CYP1A1P04798 512 aaPredicted RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 FCGR1AP12314 374 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 ACO1P21399 889 aaKnown RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 OR1E1P30953 314 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 RRM2P31350 389 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 NOS2P35228 1153 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 GNGT1P63211 74 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 GRIK4Q16099 956 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 GSTA3Q16772 222 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 PRMT9Q6P2P2 845 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 SAMD7Q7Z3H4 446 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 LCA5Q86VQ0 697 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 TERB1Q8NA31 727 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 SLC44A5Q8NCS7 719 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 ATG4CQ96DT6 458 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 PRICKLE1Q96MT3 831 aaPredicted RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 OLFM1Q99784 485 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 ILKAPQ9H0C8 392 aaPredicted RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms