RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 TGFB2P61812 414 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 CACNB2Q08289 660 aaPredicted RBP13.14□□□□□ -0.31
RETREG3-201ENST00000309428 RNF43Q68DV7 783 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 FAM131BQ86XD5 332 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 RIBC1Q8N443 379 aaPredicted RBP13.14□□□□□ -0.31
RETREG3-201ENST00000309428 CDCA5Q96FF9 252 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 HESX1Q9UBX0 185 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 H0YCG3 227 aa13.13□□□□□ -0.31
RETREG3-201ENST00000309428 AHCYL1O43865 530 aa13.13□□□□□ -0.31
RETREG3-201ENST00000309428 EDF1O60869 148 aaKnown RBP13.13□□□□□ -0.31
RETREG3-201ENST00000309428 USP12O75317 370 aa13.13□□□□□ -0.31
RETREG3-201ENST00000309428 UNGP13051 313 aaPredicted RBP13.13□□□□□ -0.31
RETREG3-201ENST00000309428 TBXAS1P24557 533 aaPredicted RBP13.13□□□□□ -0.31
RETREG3-201ENST00000309428 GMPRP36959 345 aa13.13□□□□□ -0.31
RETREG3-201ENST00000309428 NDST1P52848 882 aa13.13□□□□□ -0.31
RETREG3-201ENST00000309428 RPL10AP62906 217 aaKnown RBP13.13□□□□□ -0.31
RETREG3-201ENST00000309428 ART3Q13508 389 aa13.13□□□□□ -0.31
RETREG3-201ENST00000309428 KCTD21Q4G0X4 260 aa13.13□□□□□ -0.31
RETREG3-201ENST00000309428 ACSBG2Q5FVE4 666 aa13.13□□□□□ -0.31
RETREG3-201ENST00000309428 LPCAT4Q643R3 524 aa13.13□□□□□ -0.31
RETREG3-201ENST00000309428 TRABD2AQ86V40 505 aa13.13□□□□□ -0.31
RETREG3-201ENST00000309428 DNAAF3Q8N9W5 541 aa13.13□□□□□ -0.31
RETREG3-201ENST00000309428 OPTNQ96CV9 577 aa13.13□□□□□ -0.31
RETREG3-201ENST00000309428 NMUR2Q9GZQ4 415 aa13.13□□□□□ -0.31
RETREG3-201ENST00000309428 EPB41L4BQ9H329 900 aa13.13□□□□□ -0.31
RETREG3-201ENST00000309428 SNTG2Q9NY99 539 aa13.13□□□□□ -0.31
RETREG3-201ENST00000309428 MTO1Q9Y2Z2 717 aaKnown RBP13.13□□□□□ -0.31
RETREG3-201ENST00000309428 A0A0B4J269 797 aa13.13□□□□□ -0.31
RETREG3-201ENST00000309428 PPEF2O14830 753 aa13.13□□□□□ -0.31
RETREG3-201ENST00000309428 AMPD1P23109 780 aa13.13□□□□□ -0.31
RETREG3-201ENST00000309428 IL1R2P27930 398 aa13.13□□□□□ -0.31
RETREG3-201ENST00000309428 MIPP30301 263 aa13.13□□□□□ -0.31
RETREG3-201ENST00000309428 ELK3P41970 407 aa13.13□□□□□ -0.31
RETREG3-201ENST00000309428 PEX6Q13608 980 aa13.13□□□□□ -0.31
RETREG3-201ENST00000309428 WASHC2DQ5SRD0 308 aa13.13□□□□□ -0.31
RETREG3-201ENST00000309428 IRGCQ6NXR0 463 aa13.13□□□□□ -0.31
RETREG3-201ENST00000309428 EGFL6Q8IUX8 553 aa13.13□□□□□ -0.31
RETREG3-201ENST00000309428 OLIG1Q8TAK6 271 aa13.13□□□□□ -0.31
RETREG3-201ENST00000309428 RXFP2Q8WXD0 754 aa13.13□□□□□ -0.31
RETREG3-201ENST00000309428 TMA16Q96EY4 203 aaKnown RBP13.13□□□□□ -0.31
RETREG3-201ENST00000309428 SYT11Q9BT88 431 aa13.13□□□□□ -0.31
RETREG3-201ENST00000309428 CXCL16Q9H2A7 254 aa13.13□□□□□ -0.31
RETREG3-201ENST00000309428 GPRC5DQ9NZD1 345 aa13.13□□□□□ -0.31
RETREG3-201ENST00000309428 C19orf81C9J6K1 198 aa13.12□□□□□ -0.31
RETREG3-201ENST00000309428 HNRNPRO43390 633 aaKnown RBP13.12□□□□□ -0.31
RETREG3-201ENST00000309428 TBX10O75333 385 aa13.12□□□□□ -0.31
RETREG3-201ENST00000309428 USP2O75604 605 aaPredicted RBP13.12□□□□□ -0.31
RETREG3-201ENST00000309428 HOXA7P31268 230 aaPredicted RBP13.12□□□□□ -0.31
RETREG3-201ENST00000309428 IREB2P48200 963 aaKnown RBP13.12□□□□□ -0.31
RETREG3-201ENST00000309428 SCNN1BP51168 640 aa13.12□□□□□ -0.31
RETREG3-201ENST00000309428 NEK3P51956 506 aa13.12□□□□□ -0.31
RETREG3-201ENST00000309428 SEPT6Q14141 434 aa13.12□□□□□ -0.31
RETREG3-201ENST00000309428 HSP90AA5PQ58FG0 334 aa13.12□□□□□ -0.31
RETREG3-201ENST00000309428 MFN1Q8IWA4 741 aa13.12□□□□□ -0.31
RETREG3-201ENST00000309428 CCNYL1Q8N7R7 359 aa13.12□□□□□ -0.31
RETREG3-201ENST00000309428 GSTCDQ8NEC7 633 aa13.12□□□□□ -0.31
RETREG3-201ENST00000309428 PCYT2Q99447 389 aa13.12□□□□□ -0.31
RETREG3-201ENST00000309428 ZNF395Q9H8N7 513 aaPredicted RBP13.12□□□□□ -0.31
RETREG3-201ENST00000309428 AAASQ9NRG9 546 aa13.12□□□□□ -0.31
RETREG3-201ENST00000309428 SLC17A6Q9P2U8 582 aa13.12□□□□□ -0.31
RETREG3-201ENST00000309428 FNDC3AQ9Y2H6 1198 aaKnown RBP13.12□□□□□ -0.31
RETREG3-201ENST00000309428 GOLGA8TH3BQL2 631 aa13.12□□□□□ -0.31
RETREG3-201ENST00000309428 KRT38O76015 456 aa13.12□□□□□ -0.31
RETREG3-201ENST00000309428 CALB1P05937 261 aa13.12□□□□□ -0.31
RETREG3-201ENST00000309428 BCAR1P56945 870 aa13.12□□□□□ -0.31
RETREG3-201ENST00000309428 UBAP2LQ14157 1087 aaKnown RBP13.12□□□□□ -0.31
RETREG3-201ENST00000309428 GPR162Q16538 588 aa13.12□□□□□ -0.31
RETREG3-201ENST00000309428 C4orf50Q6ZRC1 276 aa13.12□□□□□ -0.31
RETREG3-201ENST00000309428 MON1BQ7L1V2 547 aa13.12□□□□□ -0.31
RETREG3-201ENST00000309428 EZH1Q92800 747 aaPredicted RBP13.12□□□□□ -0.31
RETREG3-201ENST00000309428 PHF12Q96QT6 1004 aa13.12□□□□□ -0.31
RETREG3-201ENST00000309428 CADM1Q9BY67 442 aaKnown RBP13.12□□□□□ -0.31
RETREG3-201ENST00000309428 UBP1Q9NZI7 540 aa13.12□□□□□ -0.31
RETREG3-201ENST00000309428 COMMD10Q9Y6G5 202 aa13.12□□□□□ -0.31
RETREG3-201ENST00000309428 E9PBE3 544 aa13.12□□□□□ -0.31
RETREG3-201ENST00000309428 GRIN3BO60391 1043 aa13.12□□□□□ -0.31
RETREG3-201ENST00000309428 KLHL41O60662 606 aa13.12□□□□□ -0.31
RETREG3-201ENST00000309428 TOP3BO95985 862 aaKnown RBP13.12□□□□□ -0.31
RETREG3-201ENST00000309428 KCNA4P22459 653 aa13.12□□□□□ -0.31
RETREG3-201ENST00000309428 GOLGA7BQ2TAP0 167 aa13.12□□□□□ -0.31
RETREG3-201ENST00000309428 KBTBD12Q3ZCT8 623 aa13.12□□□□□ -0.31
RETREG3-201ENST00000309428 TLDC1Q6P9B6 456 aa13.12□□□□□ -0.31
RETREG3-201ENST00000309428 LAYNQ6UX15 382 aa13.12□□□□□ -0.31
RETREG3-201ENST00000309428 RIPOR1Q6ZS17 1223 aa13.12□□□□□ -0.31
RETREG3-201ENST00000309428 C18orf25Q96B23 403 aaPredicted RBP13.12□□□□□ -0.31
RETREG3-201ENST00000309428 PGBD4Q96DM1 585 aa13.12□□□□□ -0.31
RETREG3-201ENST00000309428 OXNAD1Q96HP4 312 aaPredicted RBP13.12□□□□□ -0.31
RETREG3-201ENST00000309428 CDT1Q9H211 546 aa13.12□□□□□ -0.31
RETREG3-201ENST00000309428 LRMDAQ9H2I8 198 aa13.12□□□□□ -0.31
RETREG3-201ENST00000309428 TMPRSS4Q9NRS4 437 aa13.12□□□□□ -0.31
RETREG3-201ENST00000309428 PDP2Q9P2J9 529 aa13.12□□□□□ -0.31
RETREG3-201ENST00000309428 PIN4Q9Y237 131 aaKnown RBP13.12□□□□□ -0.31
RETREG3-201ENST00000309428 FSCN2O14926 492 aa13.11□□□□□ -0.31
RETREG3-201ENST00000309428 TPST1O60507 370 aa13.11□□□□□ -0.31
RETREG3-201ENST00000309428 NOL3O60936 208 aaKnown RBP13.11□□□□□ -0.31
RETREG3-201ENST00000309428 PROCP04070 461 aa13.11□□□□□ -0.31
RETREG3-201ENST00000309428 SLC1A1P43005 524 aa13.11□□□□□ -0.31
RETREG3-201ENST00000309428 CCNG2Q16589 344 aa13.11□□□□□ -0.31
RETREG3-201ENST00000309428 PDK4Q16654 411 aa13.11□□□□□ -0.31
RETREG3-201ENST00000309428 CWF19L1Q69YN2 538 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms