RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 SOWAHDA6NJG2 315 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 NT5C1B-RDH14C9J2C7 533 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 ZBTB43O43298 467 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 HIP1RO75146 1068 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 FARP2O94887 1054 aaPredicted RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 LRIG2O94898 1065 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 ARHGEF15O94989 841 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 EIF2S1P05198 315 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 PSAPP07602 524 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 FDX1P10109 184 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 MSNP26038 577 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 HOXD10P28358 340 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 NRIP1P48552 1158 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 SEC24CP53992 1094 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 TMF1P82094 1093 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 ROR2Q01974 943 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 GOLGA8DPQ0D2H9 430 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 SEMA5AQ13591 1074 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 GBX1Q14549 363 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 CBX2Q14781 532 aaPredicted RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 PPP2R5AQ15172 486 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 PDCD4Q53EL6 469 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 FAM47CQ5HY64 1035 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 ANO1Q5XXA6 986 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 BAIAP2L2Q6UXY1 529 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 ZNF662Q6ZS27 426 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 TRPM8Q7Z2W7 1104 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 LYSMD3Q7Z3D4 306 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 PDSS2Q86YH6 399 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 ELMOD2Q8IZ81 293 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 ADGRG2Q8IZP9 1017 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 CRYBG2Q8N1P7 616 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 NETO2Q8NC67 525 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 MDGA1Q8NFP4 955 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 FBXO30Q8TB52 745 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 LMX1AQ8TE12 382 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 NSMAFQ92636 917 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 P2RX5Q93086 422 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 PGM2Q96G03 612 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 SIN3AQ96ST3 1273 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 PKP4Q99569 1192 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 CARD14Q9BXL6 1004 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 GSX1Q9H4S2 264 aaPredicted RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 EPHX3Q9H6B9 360 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 KIAA1586Q9HCI6 787 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 CYP4F12Q9HCS2 524 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 IL1RAPL2Q9NP60 686 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 COQ3Q9NZJ6 369 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 ASIC3Q9UHC3 531 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 TSR3Q9UJK0 312 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 BLMP54132 1417 aaPredicted RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 HERC2O95714 4834 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 PLCH1Q4KWH8 1693 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 H3BUI4 141 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 IFRD1O00458 451 aaPredicted RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 NEMP1O14524 444 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 NKRFO15226 690 aaKnown RBP eCLIP1.33□□□□□ -2.2
CEP290-201ENST00000309041 PAK4O96013 591 aaPredicted RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 SKIP12755 728 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 GP1BBP13224 206 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 TFE3P19532 575 aaPredicted RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 CYP2B6P20813 491 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 EIF4BP23588 611 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 EFNB2P52799 333 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 RAB14P61106 215 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 YBX1P67809 324 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 UBXN2AP68543 259 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 BCL2L1Q07817 233 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 GANABQ14697 944 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 TUBB8Q3ZCM7 444 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 USPL1Q5W0Q7 1092 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 RTL6Q6ICC9 239 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 GPAT2Q6NUI2 795 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 CAVIN1Q6NZI2 390 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 LINC00696Q6ZRV3 163 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 CDHR3Q6ZTQ4 885 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 MTSS1LQ765P7 747 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 BTLAQ7Z6A9 289 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 RSPH3Q86UC2 560 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 MARCH9Q86YJ5 346 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 MAB21L3Q8N8X9 362 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 SLC17A8Q8NDX2 589 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 TMEM170AQ8WVE7 144 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 PRPF31Q8WWY3 499 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 RPGRIP1Q96KN7 1286 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 NT5C1BQ96P26 610 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 FAM167BQ9BTA0 163 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 ANP32EQ9BTT0 268 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 RETREG1Q9H6L5 497 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 LTB4R2Q9NPC1 389 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 ERVK-11Q9UQG0 969 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 ZNF148Q9UQR1 794 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 IGSF1Q8N6C5 1336 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 XRN1Q8IZH2 1706 aaKnown RBP1.32□□□□□ -2.2
CEP290-201ENST00000309041 NFIBO00712 420 aa1.32□□□□□ -2.2
CEP290-201ENST00000309041 KPNA5O15131 536 aa1.32□□□□□ -2.2
CEP290-201ENST00000309041 MAPK13O15264 365 aa1.32□□□□□ -2.2
CEP290-201ENST00000309041 THAP12O43422 761 aa1.32□□□□□ -2.2
CEP290-201ENST00000309041 NME6O75414 186 aaPredicted RBP1.32□□□□□ -2.2
CEP290-201ENST00000309041 ASMTLO95671 621 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms