RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 KCTD19Q17RG1 926 aaPredicted RBP7.28□□□□□ -1.24
PTCD2-201ENST00000308077 KCNT1Q5JUK3 1230 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 EFHC1Q5JVL4 640 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 SPOUT1Q5T280 376 aaKnown RBP7.28□□□□□ -1.24
PTCD2-201ENST00000308077 SDHAF4Q5VUM1 108 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 MFSD7Q6UXD7 560 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 RNF19BQ6ZMZ0 732 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 POLNQ7Z5Q5 900 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 DEFB106AQ8N104 65 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 GPR161Q8N6U8 529 aaKnown RBP7.28□□□□□ -1.24
PTCD2-201ENST00000308077 ATAD1Q8NBU5 361 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 SCAMP5Q8TAC9 235 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 FAM172AQ8WUF8 416 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 HDAC7Q8WUI4 952 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 CENPIQ92674 756 aaPredicted RBP7.28□□□□□ -1.24
PTCD2-201ENST00000308077 RNF25Q96BH1 459 aaPredicted RBP7.28□□□□□ -1.24
PTCD2-201ENST00000308077 FAM149B1Q96BN6 582 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 ZNF558Q96NG5 402 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 SLITRK1Q96PX8 696 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 SLC2A13Q96QE2 648 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 YME1L1Q96TA2 773 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 TBCBQ99426 244 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 KRT12Q99456 494 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 DDX47Q9H0S4 455 aaKnown RBP7.28□□□□□ -1.24
PTCD2-201ENST00000308077 CRISPLD1Q9H336 500 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 PNPLA8Q9NP80 782 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 CNGB3Q9NQW8 809 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 CHST7Q9NS84 486 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 USP18Q9UMW8 372 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.28□□□□□ -1.24
PTCD2-201ENST00000308077 USP3Q9Y6I4 520 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 PLXNA4Q9HCM2 1894 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 ZNF638Q14966 1978 aaKnown RBP7.28□□□□□ -1.24
PTCD2-201ENST00000308077 TCF20Q9UGU0 1960 aaKnown RBP7.28□□□□□ -1.24
PTCD2-201ENST00000308077 MTMR11A4FU01 709 aa7.27□□□□□ -1.24
PTCD2-201ENST00000308077 H7C4K7 107 aa7.27□□□□□ -1.24
PTCD2-201ENST00000308077 SOAT2O75908 522 aa7.27□□□□□ -1.24
PTCD2-201ENST00000308077 RNF8O76064 485 aa7.27□□□□□ -1.24
PTCD2-201ENST00000308077 ZRANB2O95218 330 aaKnown RBP eCLIP7.27□□□□□ -1.24
PTCD2-201ENST00000308077 GJB5O95377 273 aa7.27□□□□□ -1.24
PTCD2-201ENST00000308077 ZBED1O96006 694 aa7.27□□□□□ -1.24
PTCD2-201ENST00000308077 RALAP11233 206 aa7.27□□□□□ -1.24
PTCD2-201ENST00000308077 RPL17P18621 184 aaKnown RBP7.27□□□□□ -1.24
PTCD2-201ENST00000308077 GRIK1P39086 918 aa7.27□□□□□ -1.24
PTCD2-201ENST00000308077 MATKP42679 507 aa7.27□□□□□ -1.24
PTCD2-201ENST00000308077 SLC5A3P53794 718 aa7.27□□□□□ -1.24
PTCD2-201ENST00000308077 ARPP19P56211 112 aa7.27□□□□□ -1.24
PTCD2-201ENST00000308077 YWHAZP63104 245 aaKnown RBP7.27□□□□□ -1.24
PTCD2-201ENST00000308077 HTRA4P83105 476 aaPredicted RBP7.27□□□□□ -1.24
PTCD2-201ENST00000308077 ADCY2Q08462 1091 aa7.27□□□□□ -1.24
PTCD2-201ENST00000308077 GPR17Q13304 367 aa7.27□□□□□ -1.24
PTCD2-201ENST00000308077 KLF1Q13351 362 aaPredicted RBP7.27□□□□□ -1.24
PTCD2-201ENST00000308077 NFE2Q16621 373 aaPredicted RBP7.27□□□□□ -1.24
PTCD2-201ENST00000308077 HADHQ16836 314 aaKnown RBP7.27□□□□□ -1.24
PTCD2-201ENST00000308077 USP41Q3LFD5 358 aa7.27□□□□□ -1.24
PTCD2-201ENST00000308077 SYPL2Q5VXT5 272 aa7.27□□□□□ -1.24
PTCD2-201ENST00000308077 PM20D1Q6GTS8 502 aa7.27□□□□□ -1.24
PTCD2-201ENST00000308077 FBXO38Q6PIJ6 1188 aa7.27□□□□□ -1.24
PTCD2-201ENST00000308077 ANKS3Q6ZW76 656 aa7.27□□□□□ -1.24
PTCD2-201ENST00000308077 DGLUCYQ7Z3D6 616 aa7.27□□□□□ -1.24
PTCD2-201ENST00000308077 BNIPLQ7Z465 357 aa7.27□□□□□ -1.24
PTCD2-201ENST00000308077 CCDC50Q8IVM0 306 aa7.27□□□□□ -1.24
PTCD2-201ENST00000308077 SCN4BQ8IWT1 228 aa7.27□□□□□ -1.24
PTCD2-201ENST00000308077 KLHL7Q8IXQ5 586 aa7.27□□□□□ -1.24
PTCD2-201ENST00000308077 SCML4Q8N228 414 aa7.27□□□□□ -1.24
PTCD2-201ENST00000308077 PRELID2Q8N945 189 aa7.27□□□□□ -1.24
PTCD2-201ENST00000308077 PIK3R5Q8WYR1 880 aa7.27□□□□□ -1.24
PTCD2-201ENST00000308077 NT5C3BQ969T7 300 aa7.27□□□□□ -1.24
PTCD2-201ENST00000308077 FUBP3Q96I24 572 aaKnown RBP eCLIP7.27□□□□□ -1.24
PTCD2-201ENST00000308077 PARD6BQ9BYG5 372 aa7.27□□□□□ -1.24
PTCD2-201ENST00000308077 PLEKHA4Q9H4M7 779 aa7.27□□□□□ -1.24
PTCD2-201ENST00000308077 NGRNQ9NPE2 291 aaKnown RBP7.27□□□□□ -1.24
PTCD2-201ENST00000308077 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.27□□□□□ -1.24
PTCD2-201ENST00000308077 MTRRQ9UBK8 725 aa7.27□□□□□ -1.24
PTCD2-201ENST00000308077 DMGDHQ9UI17 866 aaKnown RBP7.27□□□□□ -1.24
PTCD2-201ENST00000308077 NAALADL1Q9UQQ1 740 aa7.27□□□□□ -1.24
PTCD2-201ENST00000308077 PCDHB5Q9Y5E4 795 aa7.27□□□□□ -1.24
PTCD2-201ENST00000308077 CDY1Q9Y6F8 540 aa7.27□□□□□ -1.24
PTCD2-201ENST00000308077 WDR27A2RRH5 827 aa7.27□□□□□ -1.25
PTCD2-201ENST00000308077 CCDC188H7C350 402 aa7.27□□□□□ -1.25
PTCD2-201ENST00000308077 RAD51CO43502 376 aa7.27□□□□□ -1.25
PTCD2-201ENST00000308077 ZIC2O95409 532 aaPredicted RBP7.27□□□□□ -1.25
PTCD2-201ENST00000308077 LTFP02788 710 aa7.27□□□□□ -1.25
PTCD2-201ENST00000308077 SOD2P04179 222 aa7.27□□□□□ -1.25
PTCD2-201ENST00000308077 GLI1P08151 1106 aa7.27□□□□□ -1.25
PTCD2-201ENST00000308077 KRT7P08729 469 aa7.27□□□□□ -1.25
PTCD2-201ENST00000308077 CD48P09326 243 aa7.27□□□□□ -1.25
PTCD2-201ENST00000308077 RARAP10276 462 aa7.27□□□□□ -1.25
PTCD2-201ENST00000308077 KRT10P13645 584 aa7.27□□□□□ -1.25
PTCD2-201ENST00000308077 CPB1P15086 417 aa7.27□□□□□ -1.25
PTCD2-201ENST00000308077 LAG3P18627 525 aa7.27□□□□□ -1.25
PTCD2-201ENST00000308077 PGFP49763 221 aa7.27□□□□□ -1.25
PTCD2-201ENST00000308077 SULT1E1P49888 294 aa7.27□□□□□ -1.25
PTCD2-201ENST00000308077 TUBB4BP68371 445 aa7.27□□□□□ -1.25
PTCD2-201ENST00000308077 SLC7A5Q01650 507 aa7.27□□□□□ -1.25
PTCD2-201ENST00000308077 PSMD5Q16401 504 aa7.27□□□□□ -1.25
PTCD2-201ENST00000308077 DDR2Q16832 855 aa7.27□□□□□ -1.25
PTCD2-201ENST00000308077 DCAF6Q58WW2 860 aa7.27□□□□□ -1.25
PTCD2-201ENST00000308077 VSTM1Q6UX27 236 aa7.27□□□□□ -1.25
PTCD2-201ENST00000308077 SPOCD1Q6ZMY3 1216 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms