RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 BAP1Q92560 729 aa12.58□□□□□ -0.4
SMIM4-201ENST00000307106 FAM84AQ96KN4 292 aa12.58□□□□□ -0.4
SMIM4-201ENST00000307106 C8orf48Q96LL4 319 aa12.58□□□□□ -0.4
SMIM4-201ENST00000307106 XPO6Q96QU8 1125 aaKnown RBP12.58□□□□□ -0.4
SMIM4-201ENST00000307106 FIZ1Q96SL8 496 aa12.58□□□□□ -0.4
SMIM4-201ENST00000307106 IKZF4Q9H2S9 585 aa12.58□□□□□ -0.4
SMIM4-201ENST00000307106 ITM2CQ9NQX7 267 aa12.58□□□□□ -0.4
SMIM4-201ENST00000307106 GMIPQ9P107 970 aa12.58□□□□□ -0.4
SMIM4-201ENST00000307106 ITGA11Q9UKX5 1188 aa12.58□□□□□ -0.4
SMIM4-201ENST00000307106 SNX11Q9Y5W9 270 aa12.58□□□□□ -0.4
SMIM4-201ENST00000307106 AK5Q9Y6K8 562 aa12.58□□□□□ -0.4
SMIM4-201ENST00000307106 HECTD1Q9ULT8 2610 aa12.58□□□□□ -0.4
SMIM4-201ENST00000307106 NEDD8-MDP1E9PL57 170 aa12.57□□□□□ -0.4
SMIM4-201ENST00000307106 CACNG3O60359 315 aa12.57□□□□□ -0.4
SMIM4-201ENST00000307106 JUPP14923 745 aa12.57□□□□□ -0.4
SMIM4-201ENST00000307106 HNF1BP35680 557 aa12.57□□□□□ -0.4
SMIM4-201ENST00000307106 CSNK1EP49674 416 aaKnown RBP12.57□□□□□ -0.4
SMIM4-201ENST00000307106 RBP5P82980 135 aa12.57□□□□□ -0.4
SMIM4-201ENST00000307106 STARD3Q14849 445 aa12.57□□□□□ -0.4
SMIM4-201ENST00000307106 SF3A1Q15459 793 aaKnown RBP12.57□□□□□ -0.4
SMIM4-201ENST00000307106 KIF19Q2TAC6 998 aa12.57□□□□□ -0.4
SMIM4-201ENST00000307106 FUT11Q495W5 492 aa12.57□□□□□ -0.4
SMIM4-201ENST00000307106 DPH6Q7L8W6 267 aa12.57□□□□□ -0.4
SMIM4-201ENST00000307106 BRSK2Q8IWQ3 736 aa12.57□□□□□ -0.4
SMIM4-201ENST00000307106 C1orf216Q8TAB5 229 aa12.57□□□□□ -0.4
SMIM4-201ENST00000307106 KBTBD7Q8WVZ9 684 aa12.57□□□□□ -0.4
SMIM4-201ENST00000307106 DUSP9Q99956 384 aaKnown RBP12.57□□□□□ -0.4
SMIM4-201ENST00000307106 FAM213AQ9BRX8 229 aa12.57□□□□□ -0.4
SMIM4-201ENST00000307106 BBS2Q9BXC9 721 aa12.57□□□□□ -0.4
SMIM4-201ENST00000307106 FTSJ1Q9UET6 329 aa12.57□□□□□ -0.4
SMIM4-201ENST00000307106 DNMT3LQ9UJW3 386 aa12.57□□□□□ -0.4
SMIM4-201ENST00000307106 ERVH48-1M5A8F1 160 aa12.56□□□□□ -0.4
SMIM4-201ENST00000307106 TBCAO75347 108 aaKnown RBP12.56□□□□□ -0.4
SMIM4-201ENST00000307106 KRT18P05783 430 aaKnown RBP12.56□□□□□ -0.4
SMIM4-201ENST00000307106 PDGFRBP09619 1106 aa12.56□□□□□ -0.4
SMIM4-201ENST00000307106 IRF1P10914 325 aa12.56□□□□□ -0.4
SMIM4-201ENST00000307106 TYRP14679 529 aa12.56□□□□□ -0.4
SMIM4-201ENST00000307106 YWHAQP27348 245 aa12.56□□□□□ -0.4
SMIM4-201ENST00000307106 ADSSP30520 456 aa12.56□□□□□ -0.4
SMIM4-201ENST00000307106 OXTRP30559 389 aa12.56□□□□□ -0.4
SMIM4-201ENST00000307106 TPMTP51580 245 aa12.56□□□□□ -0.4
SMIM4-201ENST00000307106 AFF3P51826 1226 aaKnown RBP12.56□□□□□ -0.4
SMIM4-201ENST00000307106 CACNA2D1P54289 1103 aa12.56□□□□□ -0.4
SMIM4-201ENST00000307106 ANAPC15P60006 121 aa12.56□□□□□ -0.4
SMIM4-201ENST00000307106 POSTNQ15063 836 aa12.56□□□□□ -0.4
SMIM4-201ENST00000307106 TAF1BQ53T94 588 aaPredicted RBP12.56□□□□□ -0.4
SMIM4-201ENST00000307106 MDH1BQ5I0G3 518 aa12.56□□□□□ -0.4
SMIM4-201ENST00000307106 HECTD3Q5T447 861 aa12.56□□□□□ -0.4
SMIM4-201ENST00000307106 HS2ST1Q7LGA3 356 aa12.56□□□□□ -0.4
SMIM4-201ENST00000307106 LURAP1LQ8IV03 231 aa12.56□□□□□ -0.4
SMIM4-201ENST00000307106 PDZD8Q8NEN9 1154 aa12.56□□□□□ -0.4
SMIM4-201ENST00000307106 SNIP1Q8TAD8 396 aaKnown RBP12.56□□□□□ -0.4
SMIM4-201ENST00000307106 MYCBPAPQ8TBZ2 947 aa12.56□□□□□ -0.4
SMIM4-201ENST00000307106 SNX19Q92543 992 aa12.56□□□□□ -0.4
SMIM4-201ENST00000307106 WBP2Q969T9 261 aa12.56□□□□□ -0.4
SMIM4-201ENST00000307106 MKRN2Q9H000 416 aaKnown RBP12.56□□□□□ -0.4
SMIM4-201ENST00000307106 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.56□□□□□ -0.4
SMIM4-201ENST00000307106 TMEM30AQ9NV96 361 aa12.56□□□□□ -0.4
SMIM4-201ENST00000307106 SIX4Q9UIU6 781 aa12.56□□□□□ -0.4
SMIM4-201ENST00000307106 STON1Q9Y6Q2 735 aa12.56□□□□□ -0.4
SMIM4-201ENST00000307106 VWA3AA6NCI4 1184 aa12.55□□□□□ -0.4
SMIM4-201ENST00000307106 PYCARD-AS1I3L0S3 204 aa12.55□□□□□ -0.4
SMIM4-201ENST00000307106 KCNK3O14649 394 aa12.55□□□□□ -0.4
SMIM4-201ENST00000307106 PCDHGA12O60330 932 aa12.55□□□□□ -0.4
SMIM4-201ENST00000307106 WARSP23381 471 aaKnown RBP12.55□□□□□ -0.4
SMIM4-201ENST00000307106 DGKGP49619 791 aa12.55□□□□□ -0.4
SMIM4-201ENST00000307106 CCT8P50990 548 aa12.55□□□□□ -0.4
SMIM4-201ENST00000307106 CLDN6P56747 220 aa12.55□□□□□ -0.4
SMIM4-201ENST00000307106 CXADRP78310 365 aa12.55□□□□□ -0.4
SMIM4-201ENST00000307106 KCNC4Q03721 635 aa12.55□□□□□ -0.4
SMIM4-201ENST00000307106 TEAD4Q15561 434 aa12.55□□□□□ -0.4
SMIM4-201ENST00000307106 INAVAQ3KP66 663 aa12.55□□□□□ -0.4
SMIM4-201ENST00000307106 TPGS1Q6ZTW0 290 aa12.55□□□□□ -0.4
SMIM4-201ENST00000307106 LIMS2Q7Z4I7 341 aa12.55□□□□□ -0.4
SMIM4-201ENST00000307106 TMPRSS6Q8IU80 811 aa12.55□□□□□ -0.4
SMIM4-201ENST00000307106 NUP93Q8N1F7 819 aa12.55□□□□□ -0.4
SMIM4-201ENST00000307106 ZSWIM2Q8NEG5 633 aa12.55□□□□□ -0.4
SMIM4-201ENST00000307106 OVCA2Q8WZ82 227 aa12.55□□□□□ -0.4
SMIM4-201ENST00000307106 FBXO32Q969P5 355 aa12.55□□□□□ -0.4
SMIM4-201ENST00000307106 SAAL1Q96ER3 474 aa12.55□□□□□ -0.4
SMIM4-201ENST00000307106 SIPA1Q96FS4 1042 aa12.55□□□□□ -0.4
SMIM4-201ENST00000307106 NUP58Q9BVL2 599 aa12.55□□□□□ -0.4
SMIM4-201ENST00000307106 TRIM9Q9C026 710 aa12.55□□□□□ -0.4
SMIM4-201ENST00000307106 MTMR12Q9C0I1 747 aa12.55□□□□□ -0.4
SMIM4-201ENST00000307106 ST6GALNAC4Q9H4F1 302 aa12.55□□□□□ -0.4
SMIM4-201ENST00000307106 CCSER2Q9H7U1 834 aa12.55□□□□□ -0.4
SMIM4-201ENST00000307106 RBAKQ9NYW8 714 aaPredicted RBP12.55□□□□□ -0.4
SMIM4-201ENST00000307106 CHORDC1Q9UHD1 332 aaPredicted RBP12.55□□□□□ -0.4
SMIM4-201ENST00000307106 ANKRD6Q9Y2G4 727 aa12.55□□□□□ -0.4
SMIM4-201ENST00000307106 R3HCC1Q9Y3T6 440 aaKnown RBP12.55□□□□□ -0.4
SMIM4-201ENST00000307106 PCDHGA1Q9Y5H4 931 aa12.55□□□□□ -0.4
SMIM4-201ENST00000307106 SLCO1B1Q9Y6L6 691 aa12.55□□□□□ -0.4
SMIM4-201ENST00000307106 ARID1BQ8NFD5 2236 aaPredicted RBP12.55□□□□□ -0.4
SMIM4-201ENST00000307106 SPTA1P02549 2419 aa12.54□□□□□ -0.4
SMIM4-201ENST00000307106 RTN3O95197 1032 aaPredicted RBP12.54□□□□□ -0.4
SMIM4-201ENST00000307106 IGLV3-19P01714 112 aa12.54□□□□□ -0.4
SMIM4-201ENST00000307106 TMEM191BP0C7N4 346 aa12.54□□□□□ -0.4
SMIM4-201ENST00000307106 IL9RQ01113 521 aa12.54□□□□□ -0.4
SMIM4-201ENST00000307106 TLE3Q04726 772 aa12.54□□□□□ -0.4
SMIM4-201ENST00000307106 TARDBPQ13148 414 aaKnown RBP eCLIP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms