RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 TFE3P19532 575 aaPredicted RBP18.29■□□□□ 0.52
KRT28-201ENST00000306658 CDKN2BP42772 138 aa18.29■□□□□ 0.52
KRT28-201ENST00000306658 RPL10AP62906 217 aaKnown RBP18.29■□□□□ 0.52
KRT28-201ENST00000306658 ROR1Q01973 937 aa18.29■□□□□ 0.52
KRT28-201ENST00000306658 PDK2Q15119 407 aa18.29■□□□□ 0.52
KRT28-201ENST00000306658 MGAT5BQ3V5L5 792 aa18.29■□□□□ 0.52
KRT28-201ENST00000306658 RAB6CQ53S08 254 aa18.29■□□□□ 0.52
KRT28-201ENST00000306658 SYPL2Q5VXT5 272 aa18.29■□□□□ 0.52
KRT28-201ENST00000306658 BSPRYQ5W0U4 402 aa18.29■□□□□ 0.52
KRT28-201ENST00000306658 BHLHA9Q7RTU4 235 aa18.29■□□□□ 0.52
KRT28-201ENST00000306658 PRELID2Q8N945 189 aa18.29■□□□□ 0.52
KRT28-201ENST00000306658 MAGOHBQ96A72 148 aaKnown RBP18.29■□□□□ 0.52
KRT28-201ENST00000306658 RUNDC3BQ96NL0 473 aa18.29■□□□□ 0.52
KRT28-201ENST00000306658 RAB6CQ9H0N0 254 aa18.29■□□□□ 0.52
KRT28-201ENST00000306658 C3orf70A6NLC5 250 aaPredicted RBP18.28■□□□□ 0.52
KRT28-201ENST00000306658 M0QYT0 321 aa18.28■□□□□ 0.52
KRT28-201ENST00000306658 HAPLN1P10915 354 aaPredicted RBP18.28■□□□□ 0.52
KRT28-201ENST00000306658 RDXP35241 583 aaKnown RBP18.28■□□□□ 0.52
KRT28-201ENST00000306658 IFRD2Q12894 506 aaPredicted RBP18.28■□□□□ 0.52
KRT28-201ENST00000306658 KLF1Q13351 362 aaPredicted RBP18.28■□□□□ 0.52
KRT28-201ENST00000306658 CYP1B1Q16678 543 aa18.28■□□□□ 0.52
KRT28-201ENST00000306658 ERMARDQ5T6L9 678 aa18.28■□□□□ 0.52
KRT28-201ENST00000306658 WDR93Q6P2C0 686 aa18.28■□□□□ 0.52
KRT28-201ENST00000306658 CYP4V2Q6ZWL3 525 aaPredicted RBP18.28■□□□□ 0.52
KRT28-201ENST00000306658 HERC6Q8IVU3 1022 aa18.28■□□□□ 0.52
KRT28-201ENST00000306658 GPR65Q8IYL9 337 aa18.28■□□□□ 0.52
KRT28-201ENST00000306658 SPATA17Q96L03 361 aa18.28■□□□□ 0.52
KRT28-201ENST00000306658 SEPT5Q99719 369 aaPredicted RBP18.28■□□□□ 0.52
KRT28-201ENST00000306658 ABCC13Q9NSE7 274 aa18.28■□□□□ 0.52
KRT28-201ENST00000306658 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.28■□□□□ 0.52
KRT28-201ENST00000306658 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.28■□□□□ 0.52
KRT28-201ENST00000306658 STIM2Q9P246 746 aa18.28■□□□□ 0.52
KRT28-201ENST00000306658 RAB21Q9UL25 225 aa18.28■□□□□ 0.52
KRT28-201ENST00000306658 SLC27A5Q9Y2P5 690 aa18.28■□□□□ 0.52
KRT28-201ENST00000306658 hCG_1818297A0A087WSY0 165 aa18.28■□□□□ 0.52
KRT28-201ENST00000306658 WDR27A2RRH5 827 aa18.28■□□□□ 0.52
KRT28-201ENST00000306658 RTN3O95197 1032 aaPredicted RBP18.28■□□□□ 0.52
KRT28-201ENST00000306658 F9P00740 461 aa18.28■□□□□ 0.52
KRT28-201ENST00000306658 ATP2A2P16615 1042 aaKnown RBP18.28■□□□□ 0.52
KRT28-201ENST00000306658 RPL17P18621 184 aaKnown RBP18.28■□□□□ 0.52
KRT28-201ENST00000306658 TUFMP49411 452 aaKnown RBP18.28■□□□□ 0.52
KRT28-201ENST00000306658 CDH6P55285 790 aa18.28■□□□□ 0.52
KRT28-201ENST00000306658 YWHAGP61981 247 aaKnown RBP eCLIP18.28■□□□□ 0.52
KRT28-201ENST00000306658 DEUP1Q05D60 604 aa18.28■□□□□ 0.52
KRT28-201ENST00000306658 DUSP4Q13115 394 aa18.28■□□□□ 0.52
KRT28-201ENST00000306658 SIX1Q15475 284 aaPredicted RBP18.28■□□□□ 0.52
KRT28-201ENST00000306658 KAZNQ674X7 775 aa18.28■□□□□ 0.52
KRT28-201ENST00000306658 TPGS2Q68CL5 300 aa18.28■□□□□ 0.52
KRT28-201ENST00000306658 BNIPLQ7Z465 357 aa18.28■□□□□ 0.52
KRT28-201ENST00000306658 ZDHHC14Q8IZN3 488 aa18.28■□□□□ 0.52
KRT28-201ENST00000306658 VPS52Q8N1B4 723 aa18.28■□□□□ 0.52
KRT28-201ENST00000306658 ARHGAP18Q8N392 663 aa18.28■□□□□ 0.52
KRT28-201ENST00000306658 TTC9BQ8N6N2 239 aa18.28■□□□□ 0.52
KRT28-201ENST00000306658 C12orf50Q8NA57 414 aaPredicted RBP18.28■□□□□ 0.52
KRT28-201ENST00000306658 SLC7A14Q8TBB6 771 aa18.28■□□□□ 0.52
KRT28-201ENST00000306658 CLP1Q92989 425 aaKnown RBP18.28■□□□□ 0.52
KRT28-201ENST00000306658 CEP295NLQ96MC4 621 aa18.28■□□□□ 0.52
KRT28-201ENST00000306658 PNKPQ96T60 521 aa18.28■□□□□ 0.52
KRT28-201ENST00000306658 CLSTN3Q9BQT9 956 aa18.28■□□□□ 0.52
KRT28-201ENST00000306658 LRRC19Q9H756 370 aa18.28■□□□□ 0.52
KRT28-201ENST00000306658 MRPL17Q9NRX2 175 aaKnown RBP18.28■□□□□ 0.52
KRT28-201ENST00000306658 COMMD8Q9NX08 183 aa18.28■□□□□ 0.52
KRT28-201ENST00000306658 AFF4Q9UHB7 1163 aaKnown RBP18.28■□□□□ 0.52
KRT28-201ENST00000306658 AMACRQ9UHK6 382 aa18.28■□□□□ 0.52
KRT28-201ENST00000306658 ZMYND8Q9ULU4 1186 aaPredicted RBP18.28■□□□□ 0.52
KRT28-201ENST00000306658 SCML2Q9UQR0 700 aa18.28■□□□□ 0.52
KRT28-201ENST00000306658 ADAM12O43184 909 aa18.27■□□□□ 0.52
KRT28-201ENST00000306658 RAD51CO43502 376 aa18.27■□□□□ 0.52
KRT28-201ENST00000306658 TLL1O43897 1013 aa18.27■□□□□ 0.52
KRT28-201ENST00000306658 FGF18O76093 207 aa18.27■□□□□ 0.52
KRT28-201ENST00000306658 KRT10P13645 584 aa18.27■□□□□ 0.52
KRT28-201ENST00000306658 GPR15P49685 360 aa18.27■□□□□ 0.52
KRT28-201ENST00000306658 SLC7A5Q01650 507 aa18.27■□□□□ 0.52
KRT28-201ENST00000306658 DHX34Q14147 1143 aaKnown RBP18.27■□□□□ 0.52
KRT28-201ENST00000306658 KRT81Q14533 505 aa18.27■□□□□ 0.52
KRT28-201ENST00000306658 TAZQ16635 292 aa18.27■□□□□ 0.52
KRT28-201ENST00000306658 SDHAF4Q5VUM1 108 aa18.27■□□□□ 0.52
KRT28-201ENST00000306658 BTBD8Q5XKL5 378 aa18.27■□□□□ 0.52
KRT28-201ENST00000306658 DENND5BQ6ZUT9 1274 aa18.27■□□□□ 0.52
KRT28-201ENST00000306658 MON1AQ86VX9 555 aa18.27■□□□□ 0.52
KRT28-201ENST00000306658 PSTKQ8IV42 348 aaKnown RBP18.27■□□□□ 0.52
KRT28-201ENST00000306658 ZNF461Q8TAF7 563 aa18.27■□□□□ 0.52
KRT28-201ENST00000306658 DPF3Q92784 378 aa18.27■□□□□ 0.52
KRT28-201ENST00000306658 PGAP3Q96FM1 320 aaPredicted RBP18.27■□□□□ 0.52
KRT28-201ENST00000306658 SNRNP25Q9BV90 132 aaKnown RBP18.27■□□□□ 0.52
KRT28-201ENST00000306658 CALN1Q9BXU9 219 aa18.27■□□□□ 0.52
KRT28-201ENST00000306658 ADAM33Q9BZ11 813 aa18.27■□□□□ 0.52
KRT28-201ENST00000306658 IL37Q9NZH6 218 aa18.27■□□□□ 0.52
KRT28-201ENST00000306658 HSFX1Q9UBD0 423 aa18.27■□□□□ 0.52
KRT28-201ENST00000306658 SSX2IPQ9Y2D8 614 aa18.27■□□□□ 0.52
KRT28-201ENST00000306658 VNN2O95498 520 aa18.26■□□□□ 0.51
KRT28-201ENST00000306658 FNTAP49354 379 aa18.26■□□□□ 0.51
KRT28-201ENST00000306658 MRPS25P82663 173 aaKnown RBP18.26■□□□□ 0.51
KRT28-201ENST00000306658 CREMQ03060 361 aa18.26■□□□□ 0.51
KRT28-201ENST00000306658 NME3Q13232 169 aa18.26■□□□□ 0.51
KRT28-201ENST00000306658 BRD3Q15059 726 aa18.26■□□□□ 0.51
KRT28-201ENST00000306658 CCDC137Q6PK04 289 aaKnown RBP18.26■□□□□ 0.51
KRT28-201ENST00000306658 SND1Q7KZF4 910 aaKnown RBP eCLIP18.26■□□□□ 0.51
KRT28-201ENST00000306658 ANKS1BQ7Z6G8 1248 aa18.26■□□□□ 0.51
KRT28-201ENST00000306658 VSIG1Q86XK7 387 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms