RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 PBX1P40424 430 aa16.88■□□□□ 0.29
BRD3-201ENST00000303407 ZDHHC17Q8IUH5 632 aa16.88■□□□□ 0.29
BRD3-201ENST00000303407 ASB7Q9H672 318 aa16.88■□□□□ 0.29
BRD3-201ENST00000303407 TMEM134Q9H6X4 195 aa16.88■□□□□ 0.29
BRD3-201ENST00000303407 RUBCNLQ9H714 662 aa16.88■□□□□ 0.29
BRD3-201ENST00000303407 GPBP1L1Q9HC44 474 aaPredicted RBP16.88■□□□□ 0.29
BRD3-201ENST00000303407 RGS4P49798 205 aa16.88■□□□□ 0.29
BRD3-201ENST00000303407 FLOT2Q14254 428 aa16.88■□□□□ 0.29
BRD3-201ENST00000303407 C17orf80Q9BSJ5 609 aa16.88■□□□□ 0.29
BRD3-201ENST00000303407 COG4Q9H9E3 785 aa16.88■□□□□ 0.29
BRD3-201ENST00000303407 C2CD2LO14523 706 aa16.88■□□□□ 0.29
BRD3-201ENST00000303407 ADIGQ0VDE8 80 aa16.88■□□□□ 0.29
BRD3-201ENST00000303407 ARHGEF7Q14155 803 aa16.88■□□□□ 0.29
BRD3-201ENST00000303407 SLC27A1Q6PCB7 646 aa16.88■□□□□ 0.29
BRD3-201ENST00000303407 FBXO32Q969P5 355 aa16.88■□□□□ 0.29
BRD3-201ENST00000303407 NAF1Q96HR8 494 aaKnown RBP16.88■□□□□ 0.29
BRD3-201ENST00000303407 SPATA17Q96L03 361 aa16.88■□□□□ 0.29
BRD3-201ENST00000303407 ARHGAP26Q9UNA1 814 aa16.88■□□□□ 0.29
BRD3-201ENST00000303407 F5H5T6 163 aa16.88■□□□□ 0.29
BRD3-201ENST00000303407 H0Y626 953 aa16.88■□□□□ 0.29
BRD3-201ENST00000303407 CXCL11O14625 94 aa16.88■□□□□ 0.29
BRD3-201ENST00000303407 SKAP2O75563 359 aaPredicted RBP16.88■□□□□ 0.29
BRD3-201ENST00000303407 EIF4BP23588 611 aaKnown RBP16.88■□□□□ 0.29
BRD3-201ENST00000303407 PTPN7P35236 360 aa16.88■□□□□ 0.29
BRD3-201ENST00000303407 MIB1Q86YT6 1006 aa16.88■□□□□ 0.29
BRD3-201ENST00000303407 ZNF555Q8NEP9 628 aa16.88■□□□□ 0.29
BRD3-201ENST00000303407 CEP41Q9BYV8 373 aa16.88■□□□□ 0.29
BRD3-201ENST00000303407 ADNPQ9H2P0 1102 aa16.88■□□□□ 0.29
BRD3-201ENST00000303407 RIC8BQ9NVN3 520 aa16.88■□□□□ 0.29
BRD3-201ENST00000303407 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.88■□□□□ 0.29
BRD3-201ENST00000303407 HSPA1AP0DMV8 641 aaKnown RBP16.87■□□□□ 0.29
BRD3-201ENST00000303407 HSPA1BP0DMV9 641 aaKnown RBP16.87■□□□□ 0.29
BRD3-201ENST00000303407 UBA1P22314 1058 aaKnown RBP16.87■□□□□ 0.29
BRD3-201ENST00000303407 SLC11A2P49281 568 aa16.87■□□□□ 0.29
BRD3-201ENST00000303407 GTF2H3Q13889 308 aa16.87■□□□□ 0.29
BRD3-201ENST00000303407 CYGBQ8WWM9 190 aa16.87■□□□□ 0.29
BRD3-201ENST00000303407 NAT9Q9BTE0 207 aa16.87■□□□□ 0.29
BRD3-201ENST00000303407 KRT16P08779 473 aa16.87■□□□□ 0.29
BRD3-201ENST00000303407 TMEM161BQ8NDZ6 487 aa16.87■□□□□ 0.29
BRD3-201ENST00000303407 PKD2L2Q9NZM6 624 aa16.87■□□□□ 0.29
BRD3-201ENST00000303407 VANGL2Q9ULK5 521 aa16.87■□□□□ 0.29
BRD3-201ENST00000303407 FAM208AQ9UK61 1670 aaKnown RBP16.87■□□□□ 0.29
BRD3-201ENST00000303407 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.87■□□□□ 0.29
BRD3-201ENST00000303407 WDR27A2RRH5 827 aa16.87■□□□□ 0.29
BRD3-201ENST00000303407 GLRA2P23416 452 aa16.87■□□□□ 0.29
BRD3-201ENST00000303407 ZNF177Q13360 481 aaPredicted RBP16.87■□□□□ 0.29
BRD3-201ENST00000303407 GRAMD4Q6IC98 578 aa16.87■□□□□ 0.29
BRD3-201ENST00000303407 CATSPERGQ6ZRH7 1159 aa16.87■□□□□ 0.29
BRD3-201ENST00000303407 SCUBE3Q8IX30 993 aa16.87■□□□□ 0.29
BRD3-201ENST00000303407 CALB2P22676 271 aa16.87■□□□□ 0.29
BRD3-201ENST00000303407 ACAT1P24752 427 aaKnown RBP16.87■□□□□ 0.29
BRD3-201ENST00000303407 ADORA2AP29274 412 aa16.87■□□□□ 0.29
BRD3-201ENST00000303407 MAMLD1Q13495 774 aa16.87■□□□□ 0.29
BRD3-201ENST00000303407 CCDC134Q9H6E4 229 aa16.87■□□□□ 0.29
BRD3-201ENST00000303407 CNTNAP2Q9UHC6 1331 aa16.87■□□□□ 0.29
BRD3-201ENST00000303407 F8VP50 259 aa16.87■□□□□ 0.29
BRD3-201ENST00000303407 H7C4K7 107 aa16.87■□□□□ 0.29
BRD3-201ENST00000303407 CLASP2O75122 1294 aaKnown RBP16.87■□□□□ 0.29
BRD3-201ENST00000303407 JCHAINP01591 159 aa16.87■□□□□ 0.29
BRD3-201ENST00000303407 GHRP10912 638 aa16.87■□□□□ 0.29
BRD3-201ENST00000303407 RALBP11234 206 aa16.87■□□□□ 0.29
BRD3-201ENST00000303407 ST8SIA6P61647 398 aa16.87■□□□□ 0.29
BRD3-201ENST00000303407 RASA2Q15283 850 aa16.87■□□□□ 0.29
BRD3-201ENST00000303407 EFL1Q7Z2Z2 1120 aaKnown RBP16.87■□□□□ 0.29
BRD3-201ENST00000303407 ZCCHC9Q8N567 271 aaKnown RBP16.87■□□□□ 0.29
BRD3-201ENST00000303407 ATXN2LQ8WWM7 1075 aaKnown RBP16.87■□□□□ 0.29
BRD3-201ENST00000303407 FAM162AQ96A26 154 aa16.87■□□□□ 0.29
BRD3-201ENST00000303407 GLT1D1Q96MS3 346 aa16.87■□□□□ 0.29
BRD3-201ENST00000303407 FOPNLQ96NB1 174 aa16.87■□□□□ 0.29
BRD3-201ENST00000303407 TBCBQ99426 244 aa16.87■□□□□ 0.29
BRD3-201ENST00000303407 CYP39A1Q9NYL5 469 aa16.87■□□□□ 0.29
BRD3-201ENST00000303407 TAGLN3Q9UI15 199 aa16.87■□□□□ 0.29
BRD3-201ENST00000303407 RNF112Q9ULX5 631 aa16.87■□□□□ 0.29
BRD3-201ENST00000303407 TIMM13Q9Y5L4 95 aaPredicted RBP16.87■□□□□ 0.29
BRD3-201ENST00000303407 SOAT2O75908 522 aa16.86■□□□□ 0.29
BRD3-201ENST00000303407 ASMTLO95671 621 aa16.86■□□□□ 0.29
BRD3-201ENST00000303407 RPL10AP62906 217 aaKnown RBP16.86■□□□□ 0.29
BRD3-201ENST00000303407 SKOR1P84550 965 aa16.86■□□□□ 0.29
BRD3-201ENST00000303407 POU4F1Q01851 419 aa16.86■□□□□ 0.29
BRD3-201ENST00000303407 HYIQ5T013 277 aa16.86■□□□□ 0.29
BRD3-201ENST00000303407 MRNIPQ6NTE8 343 aa16.86■□□□□ 0.29
BRD3-201ENST00000303407 VSIG10LQ86VR7 867 aa16.86■□□□□ 0.29
BRD3-201ENST00000303407 APBB2Q92870 758 aa16.86■□□□□ 0.29
BRD3-201ENST00000303407 VTA1Q9NP79 307 aa16.86■□□□□ 0.29
BRD3-201ENST00000303407 CHST12Q9NRB3 414 aa16.86■□□□□ 0.29
BRD3-201ENST00000303407 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.86■□□□□ 0.29
BRD3-201ENST00000303407 UBP1Q9NZI7 540 aa16.86■□□□□ 0.29
BRD3-201ENST00000303407 MED1Q15648 1581 aaPredicted RBP16.86■□□□□ 0.29
BRD3-201ENST00000303407 C2orf81A6NN90 581 aa16.86■□□□□ 0.29
BRD3-201ENST00000303407 MIPP30301 263 aa16.86■□□□□ 0.29
BRD3-201ENST00000303407 SSTR1P30872 391 aa16.86■□□□□ 0.29
BRD3-201ENST00000303407 FAM71AQ8IYT1 594 aa16.86■□□□□ 0.29
BRD3-201ENST00000303407 IL31RAQ8NI17 732 aa16.86■□□□□ 0.29
BRD3-201ENST00000303407 TRMT6Q9UJA5 497 aaKnown RBP16.86■□□□□ 0.29
BRD3-201ENST00000303407 ROBO3Q96MS0 1386 aa16.86■□□□□ 0.29
BRD3-201ENST00000303407 PPP1R11O60927 126 aaPredicted RBP16.86■□□□□ 0.29
BRD3-201ENST00000303407 CCDC130P13994 396 aa16.86■□□□□ 0.29
BRD3-201ENST00000303407 HDAC4P56524 1084 aa16.86■□□□□ 0.29
BRD3-201ENST00000303407 EFEMP1Q12805 493 aa16.86■□□□□ 0.29
BRD3-201ENST00000303407 SGO1Q5FBB7 561 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms