RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 CNGA2Q16280 664 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 MEA1Q16626 185 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 GOLGA7BQ2TAP0 167 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 CCDC40Q4G0X9 1142 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 DGKKQ5KSL6 1271 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 CDKAL1Q5VV42 579 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 RNF43Q68DV7 783 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 PMF1Q6P1K2 205 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 GJB7Q6PEY0 223 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 RRAGAQ7L523 313 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 APTXQ7Z2E3 356 aaKnown RBP11.86□□□□□ -0.51
CLCC1-201ENST00000302500 BBS7Q8IWZ6 715 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 SHC3Q92529 594 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 HEXIM2Q96MH2 286 aaKnown RBP11.86□□□□□ -0.51
CLCC1-201ENST00000302500 NT5C1BQ96P26 610 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 IPO9Q96P70 1041 aaKnown RBP11.86□□□□□ -0.51
CLCC1-201ENST00000302500 NUP62CLQ9H1M0 184 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 EPC1Q9H2F5 836 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 THAP9Q9H5L6 903 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 ACP6Q9NPH0 428 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 TLR8Q9NR97 1041 aaKnown RBP11.86□□□□□ -0.51
CLCC1-201ENST00000302500 POLR3BQ9NW08 1133 aaPredicted RBP11.86□□□□□ -0.51
CLCC1-201ENST00000302500 SPATA6Q9NWH7 488 aaPredicted RBP11.86□□□□□ -0.51
CLCC1-201ENST00000302500 MARK1Q9P0L2 795 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.86□□□□□ -0.51
CLCC1-201ENST00000302500 STK25O00506 426 aa11.85□□□□□ -0.51
CLCC1-201ENST00000302500 MDM4O15151 490 aa11.85□□□□□ -0.51
CLCC1-201ENST00000302500 NCAM2O15394 837 aa11.85□□□□□ -0.51
CLCC1-201ENST00000302500 STC2O76061 302 aa11.85□□□□□ -0.51
CLCC1-201ENST00000302500 TGM1P22735 817 aa11.85□□□□□ -0.51
CLCC1-201ENST00000302500 EIF2DP41214 584 aaKnown RBP11.85□□□□□ -0.51
CLCC1-201ENST00000302500 GPD2P43304 727 aa11.85□□□□□ -0.51
CLCC1-201ENST00000302500 BCAT1P54687 386 aa11.85□□□□□ -0.51
CLCC1-201ENST00000302500 BST2Q10589 180 aaKnown RBP11.85□□□□□ -0.51
CLCC1-201ENST00000302500 EIF4EBP2Q13542 120 aaPredicted RBP11.85□□□□□ -0.51
CLCC1-201ENST00000302500 SGO2Q562F6 1265 aa11.85□□□□□ -0.51
CLCC1-201ENST00000302500 CT47A1Q5JQC4 288 aaPredicted RBP11.85□□□□□ -0.51
CLCC1-201ENST00000302500 TMEM270Q6UE05 265 aa11.85□□□□□ -0.51
CLCC1-201ENST00000302500 PPM1KQ8N3J5 372 aa11.85□□□□□ -0.51
CLCC1-201ENST00000302500 CPA6Q8N4T0 437 aa11.85□□□□□ -0.51
CLCC1-201ENST00000302500 WDTC1Q8N5D0 677 aa11.85□□□□□ -0.51
CLCC1-201ENST00000302500 RBBP8NLQ8NC74 664 aaPredicted RBP11.85□□□□□ -0.51
CLCC1-201ENST00000302500 CCDC150Q8NCX0 1101 aa11.85□□□□□ -0.51
CLCC1-201ENST00000302500 NDRG1Q92597 394 aaKnown RBP11.85□□□□□ -0.51
CLCC1-201ENST00000302500 OTUB2Q96DC9 234 aa11.85□□□□□ -0.51
CLCC1-201ENST00000302500 NAA15Q9BXJ9 866 aaKnown RBP11.85□□□□□ -0.51
CLCC1-201ENST00000302500 SAMSN1Q9NSI8 373 aaKnown RBP11.85□□□□□ -0.51
CLCC1-201ENST00000302500 FBXO10Q9UK96 956 aa11.85□□□□□ -0.51
CLCC1-201ENST00000302500 NUDT5Q9UKK9 219 aa11.85□□□□□ -0.51
CLCC1-201ENST00000302500 KIAA1257Q9ULG3 409 aa11.85□□□□□ -0.51
CLCC1-201ENST00000302500 PCDHGA2Q9Y5H1 932 aa11.85□□□□□ -0.51
CLCC1-201ENST00000302500 CKAP5Q14008 2032 aa11.84□□□□□ -0.51
CLCC1-201ENST00000302500 SPEGQ15772 3267 aa11.84□□□□□ -0.51
CLCC1-201ENST00000302500 YJEFN3A6XGL0 299 aa11.84□□□□□ -0.51
CLCC1-201ENST00000302500 E7ENQ6 273 aa11.84□□□□□ -0.51
CLCC1-201ENST00000302500 LAMTOR5O43504 91 aa11.84□□□□□ -0.51
CLCC1-201ENST00000302500 IGLV3-27P01718 113 aa11.84□□□□□ -0.51
CLCC1-201ENST00000302500 SETSIPP0DME0 302 aa11.84□□□□□ -0.51
CLCC1-201ENST00000302500 CCDC192P0DO97 292 aa11.84□□□□□ -0.51
CLCC1-201ENST00000302500 MBL2P11226 248 aaPredicted RBP11.84□□□□□ -0.51
CLCC1-201ENST00000302500 RARGP13631 454 aa11.84□□□□□ -0.51
CLCC1-201ENST00000302500 HNRNPLP14866 589 aaKnown RBP eCLIP11.84□□□□□ -0.51
CLCC1-201ENST00000302500 DRD1P21728 446 aa11.84□□□□□ -0.51
CLCC1-201ENST00000302500 BRD2P25440 801 aaKnown RBP11.84□□□□□ -0.51
CLCC1-201ENST00000302500 KIR2DL1P43626 348 aaPredicted RBP11.84□□□□□ -0.51
CLCC1-201ENST00000302500 SLC6A11P48066 632 aa11.84□□□□□ -0.51
CLCC1-201ENST00000302500 IFNAR2P48551 515 aa11.84□□□□□ -0.51
CLCC1-201ENST00000302500 PSEN1P49768 467 aa11.84□□□□□ -0.51
CLCC1-201ENST00000302500 TKTL1P51854 596 aa11.84□□□□□ -0.51
CLCC1-201ENST00000302500 DAOAP59103 153 aa11.84□□□□□ -0.51
CLCC1-201ENST00000302500 NCAPHQ15003 741 aa11.84□□□□□ -0.51
CLCC1-201ENST00000302500 DDX42Q86XP3 938 aaKnown RBP eCLIP11.84□□□□□ -0.51
CLCC1-201ENST00000302500 TMEM25Q86YD3 366 aa11.84□□□□□ -0.51
CLCC1-201ENST00000302500 UBA3Q8TBC4 463 aa11.84□□□□□ -0.51
CLCC1-201ENST00000302500 CD101Q93033 1021 aa11.84□□□□□ -0.51
CLCC1-201ENST00000302500 P2RY13Q9BPV8 354 aa11.84□□□□□ -0.51
CLCC1-201ENST00000302500 FAM126AQ9BYI3 521 aaPredicted RBP11.84□□□□□ -0.51
CLCC1-201ENST00000302500 ULBP1Q9BZM6 244 aa11.84□□□□□ -0.51
CLCC1-201ENST00000302500 ZSCAN32Q9NX65 697 aa11.84□□□□□ -0.51
CLCC1-201ENST00000302500 APEX2Q9UBZ4 518 aa11.84□□□□□ -0.51
CLCC1-201ENST00000302500 STOML2Q9UJZ1 356 aa11.84□□□□□ -0.51
CLCC1-201ENST00000302500 TRIM24O15164 1050 aa11.83□□□□□ -0.52
CLCC1-201ENST00000302500 GFRA3O60609 400 aa11.83□□□□□ -0.52
CLCC1-201ENST00000302500 RNF40O75150 1001 aa11.83□□□□□ -0.52
CLCC1-201ENST00000302500 NFATC1O95644 943 aa11.83□□□□□ -0.52
CLCC1-201ENST00000302500 ZBED1O96006 694 aa11.83□□□□□ -0.52
CLCC1-201ENST00000302500 ATP5C1P36542 298 aaKnown RBP11.83□□□□□ -0.52
CLCC1-201ENST00000302500 CCR3P51677 355 aa11.83□□□□□ -0.52
CLCC1-201ENST00000302500 CSTF1Q05048 431 aaKnown RBP11.83□□□□□ -0.52
CLCC1-201ENST00000302500 LRRC32Q14392 662 aa11.83□□□□□ -0.52
CLCC1-201ENST00000302500 TRIP4Q15650 581 aaPredicted RBP11.83□□□□□ -0.52
CLCC1-201ENST00000302500 MAN2A1Q16706 1144 aa11.83□□□□□ -0.52
CLCC1-201ENST00000302500 LY6G5CQ5SRR4 150 aa11.83□□□□□ -0.52
CLCC1-201ENST00000302500 CC2D1AQ6P1N0 951 aaPredicted RBP11.83□□□□□ -0.52
CLCC1-201ENST00000302500 MSANTD2Q6P1R3 559 aa11.83□□□□□ -0.52
CLCC1-201ENST00000302500 C11orf57Q6ZUT1 292 aaPredicted RBP11.83□□□□□ -0.52
CLCC1-201ENST00000302500 USP33Q8TEY7 942 aa11.83□□□□□ -0.52
CLCC1-201ENST00000302500 CLEC4CQ8WTT0 213 aa11.83□□□□□ -0.52
CLCC1-201ENST00000302500 SECISBP2LQ93073 1101 aaKnown RBP11.83□□□□□ -0.52
CLCC1-201ENST00000302500 CRACR2AQ9BSW2 395 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms