RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 RAP1GAPP47736 663 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 MRPS22P82650 360 aaKnown RBP15.2■□□□□ 0.02
COL6A2-201ENST00000300527 EML3Q32P44 896 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 NADK2Q4G0N4 442 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 ANKRD20A4Q4UJ75 823 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 B3GNT9Q6UX72 402 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 CDAN1Q8IWY9 1227 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 MIPOL1Q8TD10 442 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 NGLY1Q96IV0 654 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 PRMT6Q96LA8 375 aaPredicted RBP15.2■□□□□ 0.02
COL6A2-201ENST00000300527 MRPL1Q9BYD6 325 aaKnown RBP15.2■□□□□ 0.02
COL6A2-201ENST00000300527 LIN28AQ9H9Z2 209 aaKnown RBP15.2■□□□□ 0.02
COL6A2-201ENST00000300527 SMYD2Q9NRG4 433 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 NR2E3Q9Y5X4 410 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 CDK5RAP2Q96SN8 1893 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 EXTL3O43909 919 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 LRCH4O75427 683 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 C4BPAP04003 597 aaKnown RBP15.2■□□□□ 0.02
COL6A2-201ENST00000300527 SERPINA6P08185 405 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 DESP17661 470 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 MYL6P60660 151 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 TMEM132AQ24JP5 1023 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 RAB6CQ53S08 254 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 ACBD5Q5T8D3 534 aaPredicted RBP15.2■□□□□ 0.02
COL6A2-201ENST00000300527 DENND1BQ6P3S1 775 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 TMEM130Q8N3G9 435 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 STKLD1Q8NE28 680 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 CLMNQ96JQ2 1002 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 RAB6CQ9H0N0 254 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 CNTN3Q9P232 1028 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 CDH22Q9UJ99 828 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 POMPQ9Y244 141 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 TDRKHQ9Y2W6 561 aaKnown RBP15.2■□□□□ 0.02
COL6A2-201ENST00000300527 NOP56O00567 594 aaKnown RBP15.2■□□□□ 0.02
COL6A2-201ENST00000300527 XPO1O14980 1071 aaKnown RBP15.2■□□□□ 0.02
COL6A2-201ENST00000300527 PMM2O15305 246 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 KRT38O76015 456 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 OSBPP22059 807 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 TLR1Q15399 786 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 SH3PXD2AQ5TCZ1 1133 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 DEPTORQ8TB45 409 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 PPP4R1Q8TF05 950 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 TFAP2BQ92481 460 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 USP13Q92995 863 aaPredicted RBP15.2■□□□□ 0.02
COL6A2-201ENST00000300527 RMDN3Q96TC7 470 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 MTMR12Q9C0I1 747 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 GPAMQ9HCL2 828 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.2■□□□□ 0.02
COL6A2-201ENST00000300527 TMCO1Q9UM00 188 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 DKC1O60832 514 aaKnown RBP eCLIP15.19■□□□□ 0.02
COL6A2-201ENST00000300527 SERPINB5P36952 375 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 ALDH1A3P47895 512 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 TRPC3Q13507 836 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 CRY2Q49AN0 593 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 PABPC1LQ4VXU2 614 aaKnown RBP15.19■□□□□ 0.02
COL6A2-201ENST00000300527 KLHDC10Q6PID8 442 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 CDR2LQ86X02 465 aaPredicted RBP15.19■□□□□ 0.02
COL6A2-201ENST00000300527 KIAA0319LQ8IZA0 1049 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 PHTF2Q8N3S3 785 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 TTC13Q8NBP0 860 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 NETO2Q8NC67 525 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 LRGUKQ96M69 825 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 C7orf26Q96N11 449 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 HAPLN3Q96S86 360 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 RNPEPQ9H4A4 650 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 FBXO40Q9UH90 709 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 ZC3H11AO75152 810 aaKnown RBP eCLIP15.19■□□□□ 0.02
COL6A2-201ENST00000300527 SIN3BO75182 1162 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 TMCC1O94876 653 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 PKNOX1P55347 436 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 KRT81Q14533 505 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 C6orf52Q5T4I8 152 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 N4BP2L1Q5TBK1 243 aaPredicted RBP15.19■□□□□ 0.02
COL6A2-201ENST00000300527 ARHGEF16Q5VV41 709 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 PDPK2PQ6A1A2 396 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 CC2D2BQ6DHV5 1058 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 VCPIP1Q96JH7 1222 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 COPS7BQ9H9Q2 264 aaPredicted RBP15.19■□□□□ 0.02
COL6A2-201ENST00000300527 ANLNQ9NQW6 1124 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 CNTNAP2Q9UHC6 1331 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 K7ERI5 159 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 ZBED1O96006 694 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 BPGMP07738 259 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 KRT7P08729 469 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 SRGAP2CP0DJJ0 459 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 SRGAP2BP0DMP2 458 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 SLC1A6P48664 564 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 YWHAZP63104 245 aaKnown RBP15.19■□□□□ 0.02
COL6A2-201ENST00000300527 PRKG1Q13976 671 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 PDK1Q15118 436 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 DBN1Q16643 649 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 SH2D4BQ5SQS7 431 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 BBS12Q6ZW61 710 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 PTAR1Q7Z6K3 402 aaPredicted RBP15.19■□□□□ 0.02
COL6A2-201ENST00000300527 SP8Q8IXZ3 490 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 DGCR14Q96DF8 476 aaKnown RBP15.19■□□□□ 0.02
COL6A2-201ENST00000300527 MASTLQ96GX5 879 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 CISHQ9NSE2 258 aa15.19■□□□□ 0.02
COL6A2-201ENST00000300527 NDC80O14777 642 aa15.18■□□□□ 0.02
COL6A2-201ENST00000300527 MIPP30301 263 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms