RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 NDFIP2Q9NV92 336 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.55□□□□□ -0.72
GABRB3-201ENST00000299267 BAIAP2L1Q9UHR4 511 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 GGT7Q9UJ14 662 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 GIT1Q9Y2X7 761 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 FARP1Q9Y4F1 1045 aaPredicted RBP10.55□□□□□ -0.72
GABRB3-201ENST00000299267 XIRP1Q702N8 1843 aaKnown RBP10.55□□□□□ -0.72
GABRB3-201ENST00000299267 TJP1Q07157 1748 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 FBXO21O94952 628 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 IGFBP4P22692 258 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 NECAB2Q7Z6G3 386 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 ANKRD52Q8NB46 1076 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 ACTRT1Q8TDG2 376 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 VCPIP1Q96JH7 1222 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 RMDN2Q96LZ7 410 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 ZNF558Q96NG5 402 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 CYTH2Q99418 400 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 MRPL9Q9BYD2 267 aaKnown RBP10.55□□□□□ -0.72
GABRB3-201ENST00000299267 HMGXB4Q9UGU5 601 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 VPS28Q9UK41 221 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 COL1A2P08123 1366 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 MYBPHLA2RUH7 354 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 E5RI56 91 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 MDM4O15151 490 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 SUN1O94901 812 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 SLC10A3P09131 477 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 NCF2P19878 526 aaPredicted RBP10.55□□□□□ -0.72
GABRB3-201ENST00000299267 PURAQ00577 322 aaKnown RBP10.55□□□□□ -0.72
GABRB3-201ENST00000299267 KLHL38Q2WGJ6 581 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 FASTKD1Q53R41 847 aaKnown RBP10.55□□□□□ -0.72
GABRB3-201ENST00000299267 C11orf63Q6NUN7 778 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 ZNF449Q6P9G9 518 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 UNC93AQ86WB7 457 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 CPNE8Q86YQ8 564 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 PGBD3Q8N328 593 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 MS4A4AQ96JQ5 239 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 ATP6V1G3Q96LB4 118 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 UNC93B1Q9H1C4 597 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 SEMA4AQ9H3S1 761 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 POPDC2Q9HBU9 364 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 TLR8Q9NR97 1041 aaKnown RBP10.55□□□□□ -0.72
GABRB3-201ENST00000299267 C20orf96Q9NUD7 363 aaPredicted RBP10.55□□□□□ -0.72
GABRB3-201ENST00000299267 PCDHGC5Q9Y5F6 944 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 CDY1Q9Y6F8 540 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 AKAP11Q9UKA4 1901 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 SOAT2O75908 522 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 FAM153BP0C7A2 387 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 STIP1P31948 543 aaKnown RBP10.54□□□□□ -0.72
GABRB3-201ENST00000299267 FLT3P36888 993 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 HSD17B3P37058 310 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 VEGFBP49765 207 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 SCNN1BP51168 640 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 FAM153CQ494X1 144 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 BEND6Q5SZJ8 279 aaPredicted RBP10.54□□□□□ -0.72
GABRB3-201ENST00000299267 CES3Q6UWW8 571 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 NDUFAF2Q8N183 169 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 TMEM199Q8N511 208 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 CCDC197Q8NCU1 140 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 KCNK16Q96T55 309 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 MARCH2Q9P0N8 246 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 FAM153AQ9UHL3 310 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 GTF2IRD1Q9UHL9 959 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 L1RE1Q9UN81 338 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 RPS6KL1Q9Y6S9 549 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 SIGLEC16A6NMB1 481 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 VNN1O95497 513 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 CFHP08603 1231 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 PRLRP16471 622 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 HNRNPH3P31942 346 aaKnown RBP10.54□□□□□ -0.72
GABRB3-201ENST00000299267 CTNNB1P35222 781 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 CASP2P42575 452 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 CENPCQ03188 943 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 PMF1Q6P1K2 205 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 KCNT2Q6UVM3 1135 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 FAM228AQ86W67 206 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 ZNF710Q8N1W2 664 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 TMEM86AQ8N2M4 240 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 MDM1Q8TC05 714 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 DDX50Q9BQ39 737 aaKnown RBP10.54□□□□□ -0.72
GABRB3-201ENST00000299267 C16orf70Q9BSU1 422 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 RBM22Q9NW64 420 aaKnown RBP eCLIP10.54□□□□□ -0.72
GABRB3-201ENST00000299267 HACD3Q9P035 362 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 SF3B1O75533 1304 aaKnown RBP eCLIP10.54□□□□□ -0.72
GABRB3-201ENST00000299267 CTIFO43310 598 aaKnown RBP10.54□□□□□ -0.72
GABRB3-201ENST00000299267 OR1E1P30953 314 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 FNTAP49354 379 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 ST8SIA6P61647 398 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 PPP2R2AP63151 447 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 PDK2Q15119 407 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 PTPRN2Q92932 1015 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 MAGEB5Q9BZ81 275 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 TRABDQ9H4I3 376 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 ANKZF1Q9H8Y5 726 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 AVENQ9NQS1 362 aaPredicted RBP10.54□□□□□ -0.72
GABRB3-201ENST00000299267 OR12D3Q9UGF7 316 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 NAALADL1Q9UQQ1 740 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 CAPN7Q9Y6W3 813 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 CNMDO75829 334 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 ERBB2P04626 1255 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 SLC2A3P11169 496 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms