RNA–Protein interactions for RNA: ENST00000299238.6

HPS6-201, Transcript of HPS6, biogenesis of lysosomal organelles complex 2 subunit 3, humanhuman

APPRIS P1 BASIC

Gene HPS6, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6-201ENST00000299238 PPP1R21Q6ZMI0 780 aa20.96■□□□□ 0.95
HPS6-201ENST00000299238 POLNQ7Z5Q5 900 aa20.96■□□□□ 0.95
HPS6-201ENST00000299238 SATL1Q86VE3 508 aa20.96■□□□□ 0.95
HPS6-201ENST00000299238 ARFGAP1Q8N6T3 406 aa20.96■□□□□ 0.95
HPS6-201ENST00000299238 NR1H4Q96RI1 486 aaPredicted RBP20.96■□□□□ 0.95
HPS6-201ENST00000299238 MROH8Q9H579 483 aa20.96■□□□□ 0.95
HPS6-201ENST00000299238 PCDH9Q9HC56 1237 aa20.96■□□□□ 0.95
HPS6-201ENST00000299238 CYTH4Q9UIA0 394 aa20.96■□□□□ 0.95
HPS6-201ENST00000299238 TRAFD1O14545 582 aaPredicted RBP20.95■□□□□ 0.94
HPS6-201ENST00000299238 SLC25A11Q02978 314 aaKnown RBP20.95■□□□□ 0.94
HPS6-201ENST00000299238 TTLL4Q14679 1199 aa20.95■□□□□ 0.94
HPS6-201ENST00000299238 IZUMO2Q6UXV1 221 aa20.95■□□□□ 0.94
HPS6-201ENST00000299238 TLE6Q9H808 572 aa20.95■□□□□ 0.94
HPS6-201ENST00000299238 INIPQ9NRY2 104 aa20.95■□□□□ 0.94
HPS6-201ENST00000299238 NXF1Q9UBU9 619 aaKnown RBP20.95■□□□□ 0.94
HPS6-201ENST00000299238 SHOC2Q9UQ13 582 aa20.95■□□□□ 0.94
HPS6-201ENST00000299238 FAM47DPA6NHR8 397 aa20.95■□□□□ 0.94
HPS6-201ENST00000299238 ALOX15BO15296 676 aa20.95■□□□□ 0.94
HPS6-201ENST00000299238 C22orf31O95567 290 aa20.95■□□□□ 0.94
HPS6-201ENST00000299238 IQCF3P0C7M6 154 aa20.95■□□□□ 0.94
HPS6-201ENST00000299238 KRT15P19012 456 aa20.95■□□□□ 0.94
HPS6-201ENST00000299238 RAP1GAPP47736 663 aa20.95■□□□□ 0.94
HPS6-201ENST00000299238 GALK1P51570 392 aa20.95■□□□□ 0.94
HPS6-201ENST00000299238 CFAP157Q5JU67 520 aa20.95■□□□□ 0.94
HPS6-201ENST00000299238 TNFSF13BQ9Y275 285 aa20.95■□□□□ 0.94
HPS6-201ENST00000299238 TBC1D30Q9Y2I9 924 aa20.95■□□□□ 0.94
HPS6-201ENST00000299238 IGBP1P78318 339 aa20.94■□□□□ 0.94
HPS6-201ENST00000299238 JOSD2Q8TAC2 188 aa20.94■□□□□ 0.94
HPS6-201ENST00000299238 GRAMD1AQ96CP6 724 aa20.94■□□□□ 0.94
HPS6-201ENST00000299238 RNPEPQ9H4A4 650 aa20.94■□□□□ 0.94
HPS6-201ENST00000299238 PAIP2BQ9ULR5 123 aaKnown RBP20.94■□□□□ 0.94
HPS6-201ENST00000299238 BARX2Q9UMQ3 279 aaPredicted RBP20.94■□□□□ 0.94
HPS6-201ENST00000299238 PLXNA1Q9UIW2 1896 aa20.94■□□□□ 0.94
HPS6-201ENST00000299238 KRT19P08727 400 aa20.94■□□□□ 0.94
HPS6-201ENST00000299238 IL1R2P27930 398 aa20.94■□□□□ 0.94
HPS6-201ENST00000299238 GJA8P48165 433 aa20.94■□□□□ 0.94
HPS6-201ENST00000299238 GDF10P55107 478 aa20.94■□□□□ 0.94
HPS6-201ENST00000299238 NR1H3Q13133 447 aa20.94■□□□□ 0.94
HPS6-201ENST00000299238 MAP7Q14244 749 aa20.94■□□□□ 0.94
HPS6-201ENST00000299238 FASTKD5Q7L8L6 764 aaKnown RBP20.94■□□□□ 0.94
HPS6-201ENST00000299238 KIAA0319LQ8IZA0 1049 aa20.94■□□□□ 0.94
HPS6-201ENST00000299238 CORO1BQ9BR76 489 aa20.94■□□□□ 0.94
HPS6-201ENST00000299238 RPF1Q9H9Y2 349 aaKnown RBP20.94■□□□□ 0.94
HPS6-201ENST00000299238 ERAP1Q9NZ08 941 aa20.94■□□□□ 0.94
HPS6-201ENST00000299238 STX18Q9P2W9 335 aaKnown RBP20.94■□□□□ 0.94
HPS6-201ENST00000299238 GRID1Q9ULK0 1009 aa20.94■□□□□ 0.94
HPS6-201ENST00000299238 STRIP2Q9ULQ0 834 aa20.94■□□□□ 0.94
HPS6-201ENST00000299238 FARP1Q9Y4F1 1045 aaPredicted RBP20.94■□□□□ 0.94
HPS6-201ENST00000299238 BOLA2-SMG1P6H3BVE0 249 aa20.93■□□□□ 0.94
HPS6-201ENST00000299238 LRCH4O75427 683 aa20.93■□□□□ 0.94
HPS6-201ENST00000299238 IL18RAPO95256 599 aa20.93■□□□□ 0.94
HPS6-201ENST00000299238 ASMTLO95671 621 aa20.93■□□□□ 0.94
HPS6-201ENST00000299238 NFICP08651 508 aa20.93■□□□□ 0.94
HPS6-201ENST00000299238 NRLP54845 237 aa20.93■□□□□ 0.94
HPS6-201ENST00000299238 YWHAEP62258 255 aaKnown RBP20.93■□□□□ 0.94
HPS6-201ENST00000299238 PDIA2Q13087 525 aaKnown RBP20.93■□□□□ 0.94
HPS6-201ENST00000299238 EFTUD2Q15029 972 aaKnown RBP eCLIP20.93■□□□□ 0.94
HPS6-201ENST00000299238 NCCRP1Q6ZVX7 275 aaPredicted RBP20.93■□□□□ 0.94
HPS6-201ENST00000299238 MTDHQ86UE4 582 aaKnown RBP20.93■□□□□ 0.94
HPS6-201ENST00000299238 EMC1Q8N766 993 aa20.93■□□□□ 0.94
HPS6-201ENST00000299238 SMYD1Q8NB12 490 aa20.93■□□□□ 0.94
HPS6-201ENST00000299238 DENND1AQ8TEH3 1009 aa20.93■□□□□ 0.94
HPS6-201ENST00000299238 UBN1Q9NPG3 1134 aa20.93■□□□□ 0.94
HPS6-201ENST00000299238 DDX43Q9NXZ2 648 aaKnown RBP20.93■□□□□ 0.94
HPS6-201ENST00000299238 CIDEBQ9UHD4 219 aa20.93■□□□□ 0.94
HPS6-201ENST00000299238 SIX4Q9UIU6 781 aa20.93■□□□□ 0.94
HPS6-201ENST00000299238 TDRKHQ9Y2W6 561 aaKnown RBP20.93■□□□□ 0.94
HPS6-201ENST00000299238 A0A1W2PPM1 405 aa20.93■□□□□ 0.94
HPS6-201ENST00000299238 CD19P15391 556 aa20.93■□□□□ 0.94
HPS6-201ENST00000299238 PSMA2P25787 234 aa20.93■□□□□ 0.94
HPS6-201ENST00000299238 ZRSR2Q15696 482 aaKnown RBP20.93■□□□□ 0.94
HPS6-201ENST00000299238 SH2D4BQ5SQS7 431 aa20.93■□□□□ 0.94
HPS6-201ENST00000299238 GJC2Q5T442 439 aaPredicted RBP20.93■□□□□ 0.94
HPS6-201ENST00000299238 SCUBE1Q8IWY4 988 aa20.93■□□□□ 0.94
HPS6-201ENST00000299238 LHX5Q9H2C1 402 aa20.93■□□□□ 0.94
HPS6-201ENST00000299238 TRABDQ9H4I3 376 aa20.93■□□□□ 0.94
HPS6-201ENST00000299238 PCDH18Q9HCL0 1135 aa20.93■□□□□ 0.94
HPS6-201ENST00000299238 DDX18Q9NVP1 670 aaKnown RBP20.93■□□□□ 0.94
HPS6-201ENST00000299238 EFR3BQ9Y2G0 817 aa20.93■□□□□ 0.94
HPS6-201ENST00000299238 GPR25O00155 361 aa20.92■□□□□ 0.94
HPS6-201ENST00000299238 DCTN3O75935 186 aa20.92■□□□□ 0.94
HPS6-201ENST00000299238 PABPC4LP0CB38 370 aaKnown RBP20.92■□□□□ 0.94
HPS6-201ENST00000299238 AMPD1P23109 780 aa20.92■□□□□ 0.94
HPS6-201ENST00000299238 TAZQ16635 292 aa20.92■□□□□ 0.94
HPS6-201ENST00000299238 ANKRD22Q5VYY1 191 aa20.92■□□□□ 0.94
HPS6-201ENST00000299238 ARMCX2Q7L311 632 aa20.92■□□□□ 0.94
HPS6-201ENST00000299238 ZNF554Q86TJ5 538 aa20.92■□□□□ 0.94
HPS6-201ENST00000299238 STMN2Q93045 179 aa20.92■□□□□ 0.94
HPS6-201ENST00000299238 MIS12Q9H081 205 aa20.92■□□□□ 0.94
HPS6-201ENST00000299238 PRMT7Q9NVM4 692 aaPredicted RBP20.92■□□□□ 0.94
HPS6-201ENST00000299238 ZFP69BQ9UJL9 534 aa20.92■□□□□ 0.94
HPS6-201ENST00000299238 STARD13Q9Y3M8 1113 aa20.92■□□□□ 0.94
HPS6-201ENST00000299238 PRPF4O43172 522 aaKnown RBP eCLIP20.92■□□□□ 0.94
HPS6-201ENST00000299238 OPHN1O60890 802 aa20.92■□□□□ 0.94
HPS6-201ENST00000299238 CD48P09326 243 aa20.92■□□□□ 0.94
HPS6-201ENST00000299238 KRT3P12035 628 aa20.92■□□□□ 0.94
HPS6-201ENST00000299238 PAX3P23760 479 aa20.92■□□□□ 0.94
HPS6-201ENST00000299238 RPA3P35244 121 aaPredicted RBP20.92■□□□□ 0.94
HPS6-201ENST00000299238 ARHGAP1Q07960 439 aa20.92■□□□□ 0.94
HPS6-201ENST00000299238 THOC5Q13769 683 aaKnown RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms