RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 TRIM67Q6ZTA4 783 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 TMEM35BQ8NCS4 154 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 ZFP28Q8NHY6 868 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.64□□□□□ -0.71
LMX1A-201ENST00000294816 PPP4R1Q8TF05 950 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 TDRD3Q9H7E2 651 aaKnown RBP10.64□□□□□ -0.71
LMX1A-201ENST00000294816 PNPOQ9NVS9 261 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 NFASCO94856 1347 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 SDR42E2A6NKP2 422 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 H0YIN7 160 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 AIM2O14862 343 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 DCXO43602 365 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 SIN3BO75182 1162 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 TFAP2AP05549 437 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 TKFCQ3LXA3 575 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 LRRC38Q5VT99 294 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 PDPK2PQ6A1A2 396 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 SCARA3Q6AZY7 606 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 DPH6Q7L8W6 267 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 ADGRG6Q86SQ4 1221 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 RNF148Q8N7C7 305 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 JOSD2Q8TAC2 188 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 DEPDC1BQ8WUY9 529 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 JADE3Q92613 823 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 ZBTB45Q96K62 511 aaPredicted RBP10.64□□□□□ -0.71
LMX1A-201ENST00000294816 CSRNP1Q96S65 589 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 THAP1Q9NVV9 213 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 RBAKQ9NYW8 714 aaPredicted RBP10.64□□□□□ -0.71
LMX1A-201ENST00000294816 ZNF219Q9P2Y4 722 aaPredicted RBP10.64□□□□□ -0.71
LMX1A-201ENST00000294816 TJP2Q9UDY2 1190 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 HEY1Q9Y5J3 304 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 PPEF1O14829 653 aaPredicted RBP10.63□□□□□ -0.71
LMX1A-201ENST00000294816 VNN1O95497 513 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 KDELR1P24390 212 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 MRPS22P82650 360 aaKnown RBP10.63□□□□□ -0.71
LMX1A-201ENST00000294816 TMEM62Q0P6H9 643 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 WASHC5Q12768 1159 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 GRM2Q14416 872 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 TEX44Q53QW1 395 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 HHIPL2Q6UWX4 724 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 B3GNT9Q6UX72 402 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 SH2D5Q6ZV89 423 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 BBS12Q6ZW61 710 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 METTL25Q8N6Q8 603 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 PIWIL2Q8TC59 973 aaKnown RBP10.63□□□□□ -0.71
LMX1A-201ENST00000294816 CHURC1Q8WUH1 139 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 HSPBAP1Q96EW2 488 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 AGO4Q9HCK5 861 aaKnown RBP10.63□□□□□ -0.71
LMX1A-201ENST00000294816 XPNPEP1Q9NQW7 623 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 MAN1C1Q9NR34 630 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 UBAP1Q9NZ09 502 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 SIRPGQ9P1W8 387 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 AGO2Q9UKV8 859 aaKnown RBP10.63□□□□□ -0.71
LMX1A-201ENST00000294816 AP4B1Q9Y6B7 739 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 ARHGAP10A1A4S6 786 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 E9PBE3 544 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 NFIBO00712 420 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 KCNN4O15554 427 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 KLHL41O60662 606 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 RFPL1O75677 317 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 KRT7P08729 469 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 CSH1P0DML2 217 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 CSH2P0DML3 217 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 KRT3P12035 628 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 NELFEP18615 380 aaKnown RBP10.63□□□□□ -0.71
LMX1A-201ENST00000294816 AOC1P19801 751 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 OSBPP22059 807 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 SLC1A6P48664 564 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 PPIDQ08752 370 aaKnown RBP10.63□□□□□ -0.71
LMX1A-201ENST00000294816 DCTN2Q13561 401 aaKnown RBP10.63□□□□□ -0.71
LMX1A-201ENST00000294816 ZBTB41Q5SVQ8 909 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 C6orf52Q5T4I8 152 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 ANGEL2Q5VTE6 544 aaKnown RBP10.63□□□□□ -0.71
LMX1A-201ENST00000294816 CASC4Q6P4E1 433 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 RNF168Q8IYW5 571 aaPredicted RBP10.63□□□□□ -0.71
LMX1A-201ENST00000294816 CCDC33Q8N5R6 958 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 C1orf21Q9H246 121 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 ST6GALNAC4Q9H4F1 302 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 COPS7BQ9H9Q2 264 aaPredicted RBP10.63□□□□□ -0.71
LMX1A-201ENST00000294816 LIN28AQ9H9Z2 209 aaKnown RBP10.63□□□□□ -0.71
LMX1A-201ENST00000294816 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.63□□□□□ -0.71
LMX1A-201ENST00000294816 BTBD7Q9P203 1132 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 COL20A1Q9P218 1284 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 TBC1D30Q9Y2I9 924 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 TTLL3Q9Y4R7 772 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 HEMK1Q9Y5R4 338 aaPredicted RBP10.63□□□□□ -0.71
LMX1A-201ENST00000294816 TEX264Q9Y6I9 313 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 ZNF536O15090 1300 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 XPO1O14980 1071 aaKnown RBP10.63□□□□□ -0.71
LMX1A-201ENST00000294816 DHX15O43143 795 aaKnown RBP10.63□□□□□ -0.71
LMX1A-201ENST00000294816 CCNT2O60583 730 aaKnown RBP10.63□□□□□ -0.71
LMX1A-201ENST00000294816 DGKIO75912 1065 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 CCDC166P0CW27 439 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 CDK4P11802 303 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 PCSK6P29122 969 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 SERPINB8P50452 374 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 YWHAZP63104 245 aaKnown RBP10.63□□□□□ -0.71
LMX1A-201ENST00000294816 RC3H1Q5TC82 1133 aaKnown RBP10.63□□□□□ -0.71
LMX1A-201ENST00000294816 LRRC8BQ6P9F7 803 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 TRMT10BQ6PF06 316 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms