RNA–Protein interactions for RNA: ENST00000294053.7

CLPB-201, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLPB, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-201ENST00000294053 MAMLD1Q13495 774 aa12.52□□□□□ -0.41
CLPB-201ENST00000294053 PDE1CQ14123 709 aaPredicted RBP12.52□□□□□ -0.41
CLPB-201ENST00000294053 HIF1AQ16665 826 aa12.52□□□□□ -0.41
CLPB-201ENST00000294053 RALGPS1Q5JS13 557 aa12.52□□□□□ -0.41
CLPB-201ENST00000294053 GALNT4Q8N4A0 578 aa12.52□□□□□ -0.41
CLPB-201ENST00000294053 CAPN8A6NHC0 703 aa12.51□□□□□ -0.41
CLPB-201ENST00000294053 E5RJQ4 531 aa12.51□□□□□ -0.41
CLPB-201ENST00000294053 MAGEB2O15479 319 aa12.51□□□□□ -0.41
CLPB-201ENST00000294053 KRT1P04264 644 aa12.51□□□□□ -0.41
CLPB-201ENST00000294053 ASLP04424 464 aa12.51□□□□□ -0.41
CLPB-201ENST00000294053 IMPDH2P12268 514 aa12.51□□□□□ -0.41
CLPB-201ENST00000294053 NELFEP18615 380 aaKnown RBP12.51□□□□□ -0.41
CLPB-201ENST00000294053 CYTH1Q15438 398 aa12.51□□□□□ -0.41
CLPB-201ENST00000294053 TARBP2Q15633 366 aaKnown RBP12.51□□□□□ -0.41
CLPB-201ENST00000294053 CYP4A22Q5TCH4 519 aa12.51□□□□□ -0.41
CLPB-201ENST00000294053 RSPH3Q86UC2 560 aa12.51□□□□□ -0.41
CLPB-201ENST00000294053 ZBTB46Q86UZ6 589 aa12.51□□□□□ -0.41
CLPB-201ENST00000294053 ZCCHC9Q8N567 271 aaKnown RBP12.51□□□□□ -0.41
CLPB-201ENST00000294053 NLRP4Q96MN2 994 aa12.51□□□□□ -0.41
CLPB-201ENST00000294053 APOL6Q9BWW8 343 aa12.51□□□□□ -0.41
CLPB-201ENST00000294053 PDGFCQ9NRA1 345 aa12.51□□□□□ -0.41
CLPB-201ENST00000294053 IGKV6D-21A0A0A0MT36 114 aa12.51□□□□□ -0.41
CLPB-201ENST00000294053 CYB561D2O14569 222 aa12.51□□□□□ -0.41
CLPB-201ENST00000294053 PRPF4O43172 522 aaKnown RBP eCLIP12.51□□□□□ -0.41
CLPB-201ENST00000294053 FAM189A1O60320 539 aa12.51□□□□□ -0.41
CLPB-201ENST00000294053 MSCO60682 206 aa12.51□□□□□ -0.41
CLPB-201ENST00000294053 FAM155BO75949 473 aa12.51□□□□□ -0.41
CLPB-201ENST00000294053 TMCC1O94876 653 aa12.51□□□□□ -0.41
CLPB-201ENST00000294053 CLPTM1O96005 669 aa12.51□□□□□ -0.41
CLPB-201ENST00000294053 INHBAP08476 426 aa12.51□□□□□ -0.41
CLPB-201ENST00000294053 VCLP18206 1134 aa12.51□□□□□ -0.41
CLPB-201ENST00000294053 RAP1GAPP47736 663 aa12.51□□□□□ -0.41
CLPB-201ENST00000294053 HIC1Q14526 733 aa12.51□□□□□ -0.41
CLPB-201ENST00000294053 PDK3Q15120 406 aa12.51□□□□□ -0.41
CLPB-201ENST00000294053 GSTA3Q16772 222 aa12.51□□□□□ -0.41
CLPB-201ENST00000294053 TMPRSS6Q8IU80 811 aa12.51□□□□□ -0.41
CLPB-201ENST00000294053 ZNF606Q8WXB4 792 aa12.51□□□□□ -0.41
CLPB-201ENST00000294053 HSPBAP1Q96EW2 488 aa12.51□□□□□ -0.41
CLPB-201ENST00000294053 LIN28AQ9H9Z2 209 aaKnown RBP12.51□□□□□ -0.41
CLPB-201ENST00000294053 TMCO1Q9UM00 188 aa12.51□□□□□ -0.41
CLPB-201ENST00000294053 ZBTB42B2RXF5 422 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 TLR3O15455 904 aaKnown RBP12.5□□□□□ -0.41
CLPB-201ENST00000294053 TYROBPO43914 113 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 ADCY3O60266 1144 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 HNRNPCL1O60812 293 aaKnown RBP12.5□□□□□ -0.41
CLPB-201ENST00000294053 TOM1L1O75674 476 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 ICAM3P32942 547 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 ZNF568Q3ZCX4 644 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 PABPC1LQ4VXU2 614 aaKnown RBP12.5□□□□□ -0.41
CLPB-201ENST00000294053 SDCCAG8Q86SQ7 713 aaPredicted RBP12.5□□□□□ -0.41
CLPB-201ENST00000294053 ABRAQ8N0Z2 381 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 PPM1NQ8N819 430 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 ARL10Q8N8L6 244 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 FBXO36Q8NEA4 188 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 DNERQ8NFT8 737 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 SIKE1Q9BRV8 207 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 MINDY3Q9H8M7 445 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 AGTPBP1Q9UPW5 1226 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 F8VP50 259 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 PEX1O43933 1283 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 C6orf222P0C671 652 aaPredicted RBP12.5□□□□□ -0.41
CLPB-201ENST00000294053 IQCF3P0C7M6 154 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 NCF2P19878 526 aaPredicted RBP12.5□□□□□ -0.41
CLPB-201ENST00000294053 CLCN3P51790 818 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 TFAMQ00059 246 aaKnown RBP12.5□□□□□ -0.41
CLPB-201ENST00000294053 OGDHQ02218 1023 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 ZNF252P-AS1Q0IIN9 211 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 PTP4A2Q12974 167 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 SESTD1Q86VW0 696 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 ICA1LQ8NDH6 482 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 AGR3Q8TD06 166 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 PPP1R13LQ8WUF5 828 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 TFAP2BQ92481 460 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 CFAP36Q96G28 342 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 PRPF18Q99633 342 aaKnown RBP12.5□□□□□ -0.41
CLPB-201ENST00000294053 CGRRF1Q99675 332 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 TLE6Q9H808 572 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 ANLNQ9NQW6 1124 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 IGBP1P78318 339 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 LAMTOR4Q0VGL1 99 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 SMTNL2Q2TAL5 461 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 CMPK2Q5EBM0 449 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 PPP6R3Q5H9R7 873 aaPredicted RBP12.5□□□□□ -0.41
CLPB-201ENST00000294053 LRRC8BQ6P9F7 803 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 CHST13Q8NET6 341 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 NIFKQ9BYG3 293 aaKnown RBP12.5□□□□□ -0.41
CLPB-201ENST00000294053 SENP1Q9P0U3 644 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 BLOC1S6Q9UL45 172 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 ZNF232Q9UNY5 417 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 HTTP42858 3142 aa12.5□□□□□ -0.41
CLPB-201ENST00000294053 E2F8A0AVK6 867 aa12.49□□□□□ -0.41
CLPB-201ENST00000294053 BOLA2-SMG1P6H3BVE0 249 aa12.49□□□□□ -0.41
CLPB-201ENST00000294053 SOCS7O14512 581 aa12.49□□□□□ -0.41
CLPB-201ENST00000294053 COPEO14579 308 aa12.49□□□□□ -0.41
CLPB-201ENST00000294053 ZC3H11AO75152 810 aaKnown RBP eCLIP12.49□□□□□ -0.41
CLPB-201ENST00000294053 TCEA3O75764 348 aa12.49□□□□□ -0.41
CLPB-201ENST00000294053 PROSCO94903 275 aa12.49□□□□□ -0.41
CLPB-201ENST00000294053 CDH8P55286 799 aa12.49□□□□□ -0.41
CLPB-201ENST00000294053 FAAP100Q0VG06 881 aa12.49□□□□□ -0.41
CLPB-201ENST00000294053 PTK7Q13308 1070 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms