RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 PPM1LQ5SGD2 360 aa18.63■□□□□ 0.57
CCDC78-201ENST00000293889 RTL10Q7L3V2 364 aa18.63■□□□□ 0.57
CCDC78-201ENST00000293889 DNAJB7Q7Z6W7 309 aaPredicted RBP18.63■□□□□ 0.57
CCDC78-201ENST00000293889 EMC1Q8N766 993 aa18.63■□□□□ 0.57
CCDC78-201ENST00000293889 EFHBQ8N7U6 833 aa18.63■□□□□ 0.57
CCDC78-201ENST00000293889 MNS1Q8NEH6 495 aa18.63■□□□□ 0.57
CCDC78-201ENST00000293889 TPCN2Q8NHX9 752 aa18.63■□□□□ 0.57
CCDC78-201ENST00000293889 HDAC7Q8WUI4 952 aa18.63■□□□□ 0.57
CCDC78-201ENST00000293889 FBXO32Q969P5 355 aa18.63■□□□□ 0.57
CCDC78-201ENST00000293889 PSMG2Q969U7 264 aa18.63■□□□□ 0.57
CCDC78-201ENST00000293889 BTBD6Q96KE9 485 aa18.63■□□□□ 0.57
CCDC78-201ENST00000293889 CDCA3Q99618 268 aaPredicted RBP18.63■□□□□ 0.57
CCDC78-201ENST00000293889 TTLL2Q9BWV7 592 aa18.63■□□□□ 0.57
CCDC78-201ENST00000293889 ARGLU1Q9NWB6 273 aaPredicted RBP18.63■□□□□ 0.57
CCDC78-201ENST00000293889 ASNSD1Q9NWL6 643 aa18.63■□□□□ 0.57
CCDC78-201ENST00000293889 ANAPC7Q9UJX3 599 aa18.63■□□□□ 0.57
CCDC78-201ENST00000293889 HSF2BPO75031 334 aa18.62■□□□□ 0.57
CCDC78-201ENST00000293889 RFPL2O75678 378 aa18.62■□□□□ 0.57
CCDC78-201ENST00000293889 ZMYND10O75800 440 aa18.62■□□□□ 0.57
CCDC78-201ENST00000293889 CLCN6P51797 869 aa18.62■□□□□ 0.57
CCDC78-201ENST00000293889 YWHAZP63104 245 aaKnown RBP18.62■□□□□ 0.57
CCDC78-201ENST00000293889 TUBB4BP68371 445 aa18.62■□□□□ 0.57
CCDC78-201ENST00000293889 TAF10Q12962 218 aa18.62■□□□□ 0.57
CCDC78-201ENST00000293889 CTC1Q2NKJ3 1217 aa18.62■□□□□ 0.57
CCDC78-201ENST00000293889 TRNP1Q6NT89 227 aa18.62■□□□□ 0.57
CCDC78-201ENST00000293889 SCD5Q86SK9 330 aa18.62■□□□□ 0.57
CCDC78-201ENST00000293889 GPR161Q8N6U8 529 aaKnown RBP18.62■□□□□ 0.57
CCDC78-201ENST00000293889 FAM149B1Q96BN6 582 aa18.62■□□□□ 0.57
CCDC78-201ENST00000293889 WDR24Q96S15 920 aa18.62■□□□□ 0.57
CCDC78-201ENST00000293889 GMIPQ9P107 970 aa18.62■□□□□ 0.57
CCDC78-201ENST00000293889 CCL16O15467 120 aa18.61■□□□□ 0.57
CCDC78-201ENST00000293889 LTFP02788 710 aa18.61■□□□□ 0.57
CCDC78-201ENST00000293889 GLI1P08151 1106 aa18.61■□□□□ 0.57
CCDC78-201ENST00000293889 FLT3P36888 993 aa18.61■□□□□ 0.57
CCDC78-201ENST00000293889 OGDHQ02218 1023 aa18.61■□□□□ 0.57
CCDC78-201ENST00000293889 ADAM15Q13444 863 aa18.61■□□□□ 0.57
CCDC78-201ENST00000293889 TAF12Q16514 161 aa18.61■□□□□ 0.57
CCDC78-201ENST00000293889 ARCQ7LC44 396 aa18.61■□□□□ 0.57
CCDC78-201ENST00000293889 ITIH5Q86UX2 942 aa18.61■□□□□ 0.57
CCDC78-201ENST00000293889 MYRFLQ96LU7 910 aa18.61■□□□□ 0.57
CCDC78-201ENST00000293889 CARD6Q9BX69 1037 aa18.61■□□□□ 0.57
CCDC78-201ENST00000293889 NMUR1Q9HB89 426 aa18.61■□□□□ 0.57
CCDC78-201ENST00000293889 EHD2Q9NZN4 543 aa18.61■□□□□ 0.57
CCDC78-201ENST00000293889 DPP7Q9UHL4 492 aa18.61■□□□□ 0.57
CCDC78-201ENST00000293889 ASB3Q9Y575 518 aa18.61■□□□□ 0.57
CCDC78-201ENST00000293889 CAPN6Q9Y6Q1 641 aa18.61■□□□□ 0.57
CCDC78-201ENST00000293889 A0A1W2PQH9 124 aa18.6■□□□□ 0.57
CCDC78-201ENST00000293889 C2CD4BA6NLJ0 364 aa18.6■□□□□ 0.57
CCDC78-201ENST00000293889 BUB1BO60566 1050 aaPredicted RBP18.6■□□□□ 0.57
CCDC78-201ENST00000293889 FYNP06241 537 aa18.6■□□□□ 0.57
CCDC78-201ENST00000293889 LTBRP36941 435 aa18.6■□□□□ 0.57
CCDC78-201ENST00000293889 YWHAGP61981 247 aaKnown RBP eCLIP18.6■□□□□ 0.57
CCDC78-201ENST00000293889 DLX2Q07687 328 aaPredicted RBP18.6■□□□□ 0.57
CCDC78-201ENST00000293889 SKIV2LQ15477 1246 aaKnown RBP18.6■□□□□ 0.57
CCDC78-201ENST00000293889 IFI16Q16666 785 aaKnown RBP18.6■□□□□ 0.57
CCDC78-201ENST00000293889 BSPRYQ5W0U4 402 aa18.6■□□□□ 0.57
CCDC78-201ENST00000293889 MON1AQ86VX9 555 aa18.6■□□□□ 0.57
CCDC78-201ENST00000293889 RXFP2Q8WXD0 754 aa18.6■□□□□ 0.57
CCDC78-201ENST00000293889 PABPC5Q96DU9 382 aaKnown RBP18.6■□□□□ 0.57
CCDC78-201ENST00000293889 TRMT2BQ96GJ1 504 aaKnown RBP18.6■□□□□ 0.57
CCDC78-201ENST00000293889 CALR3Q96L12 384 aaKnown RBP18.6■□□□□ 0.57
CCDC78-201ENST00000293889 POPDC2Q9HBU9 364 aa18.6■□□□□ 0.57
CCDC78-201ENST00000293889 PRDM6Q9NQX0 595 aa18.6■□□□□ 0.57
CCDC78-201ENST00000293889 CLDND1Q9NY35 253 aa18.6■□□□□ 0.57
CCDC78-201ENST00000293889 ZNF638Q14966 1978 aaKnown RBP18.6■□□□□ 0.57
CCDC78-201ENST00000293889 GRID2IPA4D2P6 1211 aa18.6■□□□□ 0.57
CCDC78-201ENST00000293889 TMEM110-MUSTN1A8MSY1 372 aa18.6■□□□□ 0.57
CCDC78-201ENST00000293889 MYO1FO00160 1098 aa18.6■□□□□ 0.57
CCDC78-201ENST00000293889 TBX10O75333 385 aa18.6■□□□□ 0.57
CCDC78-201ENST00000293889 DAB1O75553 588 aa18.6■□□□□ 0.57
CCDC78-201ENST00000293889 PDGFRAP16234 1089 aa18.6■□□□□ 0.57
CCDC78-201ENST00000293889 HOXA9P31269 272 aa18.6■□□□□ 0.57
CCDC78-201ENST00000293889 ZNF252P-AS1Q0IIN9 211 aa18.6■□□□□ 0.57
CCDC78-201ENST00000293889 MESDQ14696 234 aa18.6■□□□□ 0.57
CCDC78-201ENST00000293889 DEFB106AQ8N104 65 aa18.6■□□□□ 0.57
CCDC78-201ENST00000293889 ELMOD1Q8N336 334 aa18.6■□□□□ 0.57
CCDC78-201ENST00000293889 EDEM1Q92611 657 aa18.6■□□□□ 0.57
CCDC78-201ENST00000293889 GOLGA1Q92805 767 aa18.6■□□□□ 0.57
CCDC78-201ENST00000293889 ZNF512Q96ME7 567 aaPredicted RBP18.6■□□□□ 0.57
CCDC78-201ENST00000293889 SLITRK1Q96PX8 696 aa18.6■□□□□ 0.57
CCDC78-201ENST00000293889 SLC2A13Q96QE2 648 aa18.6■□□□□ 0.57
CCDC78-201ENST00000293889 ZNF334Q9HCZ1 680 aaPredicted RBP18.6■□□□□ 0.57
CCDC78-201ENST00000293889 OSER1Q9NX31 292 aa18.6■□□□□ 0.57
CCDC78-201ENST00000293889 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.6■□□□□ 0.57
CCDC78-201ENST00000293889 NAALADL1Q9UQQ1 740 aa18.6■□□□□ 0.57
CCDC78-201ENST00000293889 MYO16Q9Y6X6 1858 aa18.59■□□□□ 0.57
CCDC78-201ENST00000293889 KIF5CO60282 957 aa18.59■□□□□ 0.57
CCDC78-201ENST00000293889 PALMO75781 387 aa18.59■□□□□ 0.57
CCDC78-201ENST00000293889 HNRNPA1P09651 372 aaKnown RBP eCLIP18.59■□□□□ 0.57
CCDC78-201ENST00000293889 GPD1P21695 349 aa18.59■□□□□ 0.57
CCDC78-201ENST00000293889 MATKP42679 507 aa18.59■□□□□ 0.57
CCDC78-201ENST00000293889 SYPL2Q5VXT5 272 aa18.59■□□□□ 0.57
CCDC78-201ENST00000293889 ELMSAN1Q6PJG2 1045 aa18.59■□□□□ 0.57
CCDC78-201ENST00000293889 TMEM184AQ6ZMB5 413 aa18.59■□□□□ 0.57
CCDC78-201ENST00000293889 ARHGAP18Q8N392 663 aa18.59■□□□□ 0.57
CCDC78-201ENST00000293889 LRRC57Q8N9N7 239 aa18.59■□□□□ 0.57
CCDC78-201ENST00000293889 FNIP1Q8TF40 1166 aa18.59■□□□□ 0.57
CCDC78-201ENST00000293889 DDX23Q9BUQ8 820 aaKnown RBP18.59■□□□□ 0.57
CCDC78-201ENST00000293889 GOLPH3Q9H4A6 298 aa18.59■□□□□ 0.57
CCDC78-201ENST00000293889 ZDHHC7Q9NXF8 308 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms