RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 ATP6V1C1P21283 382 aa17.5■□□□□ 0.39
CHRNE-201ENST00000293780 RCN1Q15293 331 aa17.5■□□□□ 0.39
CHRNE-201ENST00000293780 CCDC14Q49A88 953 aa17.5■□□□□ 0.39
CHRNE-201ENST00000293780 RFX8Q6ZV50 586 aa17.5■□□□□ 0.39
CHRNE-201ENST00000293780 RIOX2Q8IUF8 465 aa17.5■□□□□ 0.39
CHRNE-201ENST00000293780 VPS52Q8N1B4 723 aa17.5■□□□□ 0.39
CHRNE-201ENST00000293780 SH3TC2Q8TF17 1288 aa17.5■□□□□ 0.39
CHRNE-201ENST00000293780 NRG4Q8WWG1 115 aa17.5■□□□□ 0.39
CHRNE-201ENST00000293780 CPB2Q96IY4 423 aa17.5■□□□□ 0.39
CHRNE-201ENST00000293780 PNPLA8Q9NP80 782 aa17.5■□□□□ 0.39
CHRNE-201ENST00000293780 ARHGEF4Q9NR80 690 aa17.5■□□□□ 0.39
CHRNE-201ENST00000293780 PAK5Q9P286 719 aa17.5■□□□□ 0.39
CHRNE-201ENST00000293780 RPL26L1Q9UNX3 145 aaKnown RBP17.5■□□□□ 0.39
CHRNE-201ENST00000293780 TNFSF13BQ9Y275 285 aa17.5■□□□□ 0.39
CHRNE-201ENST00000293780 LUC7L3O95232 432 aaKnown RBP17.5■□□□□ 0.39
CHRNE-201ENST00000293780 IL18RAPO95256 599 aa17.5■□□□□ 0.39
CHRNE-201ENST00000293780 VDRP11473 427 aa17.5■□□□□ 0.39
CHRNE-201ENST00000293780 NDST1P52848 882 aa17.5■□□□□ 0.39
CHRNE-201ENST00000293780 IGBP1P78318 339 aa17.5■□□□□ 0.39
CHRNE-201ENST00000293780 TFDP2Q14188 446 aa17.5■□□□□ 0.39
CHRNE-201ENST00000293780 FAM47CQ5HY64 1035 aa17.5■□□□□ 0.39
CHRNE-201ENST00000293780 MDH1BQ5I0G3 518 aa17.5■□□□□ 0.39
CHRNE-201ENST00000293780 FBXO27Q8NI29 283 aa17.5■□□□□ 0.39
CHRNE-201ENST00000293780 PCDH19Q8TAB3 1148 aa17.5■□□□□ 0.39
CHRNE-201ENST00000293780 DNAJC9Q8WXX5 260 aa17.5■□□□□ 0.39
CHRNE-201ENST00000293780 TUBB6Q9BUF5 446 aa17.5■□□□□ 0.39
CHRNE-201ENST00000293780 TSPAN16Q9UKR8 245 aa17.5■□□□□ 0.39
CHRNE-201ENST00000293780 CORO1CQ9ULV4 474 aaPredicted RBP17.5■□□□□ 0.39
CHRNE-201ENST00000293780 PLLPQ9Y342 182 aa17.5■□□□□ 0.39
CHRNE-201ENST00000293780 A6NHS1 94 aa17.49■□□□□ 0.39
CHRNE-201ENST00000293780 SOCS7O14512 581 aa17.49■□□□□ 0.39
CHRNE-201ENST00000293780 LGR5O75473 907 aa17.49■□□□□ 0.39
CHRNE-201ENST00000293780 RFPL1O75677 317 aa17.49■□□□□ 0.39
CHRNE-201ENST00000293780 PFKMP08237 780 aa17.49■□□□□ 0.39
CHRNE-201ENST00000293780 SNRPAP09012 282 aaKnown RBP17.49■□□□□ 0.39
CHRNE-201ENST00000293780 KITP10721 976 aa17.49■□□□□ 0.39
CHRNE-201ENST00000293780 BST1Q10588 318 aa17.49■□□□□ 0.39
CHRNE-201ENST00000293780 DTX3LQ8TDB6 740 aa17.49■□□□□ 0.39
CHRNE-201ENST00000293780 MCUR1Q96AQ8 359 aa17.49■□□□□ 0.39
CHRNE-201ENST00000293780 HPDLQ96IR7 371 aa17.49■□□□□ 0.39
CHRNE-201ENST00000293780 MAGEB5Q9BZ81 275 aa17.49■□□□□ 0.39
CHRNE-201ENST00000293780 MAF1Q9H063 256 aa17.49■□□□□ 0.39
CHRNE-201ENST00000293780 SPATC1LQ9H0A9 340 aa17.49■□□□□ 0.39
CHRNE-201ENST00000293780 NGRNQ9NPE2 291 aaKnown RBP17.49■□□□□ 0.39
CHRNE-201ENST00000293780 ETNK2Q9NVF9 386 aa17.49■□□□□ 0.39
CHRNE-201ENST00000293780 NMRK1Q9NWW6 199 aa17.49■□□□□ 0.39
CHRNE-201ENST00000293780 KIF3CO14782 793 aa17.49■□□□□ 0.39
CHRNE-201ENST00000293780 LIN7AO14910 233 aaPredicted RBP17.49■□□□□ 0.39
CHRNE-201ENST00000293780 TOP3BO95985 862 aaKnown RBP17.49■□□□□ 0.39
CHRNE-201ENST00000293780 ZBED1O96006 694 aa17.49■□□□□ 0.39
CHRNE-201ENST00000293780 LINGO3P0C6S8 592 aa17.49■□□□□ 0.39
CHRNE-201ENST00000293780 CSH1P0DML2 217 aa17.49■□□□□ 0.39
CHRNE-201ENST00000293780 CSH2P0DML3 217 aa17.49■□□□□ 0.39
CHRNE-201ENST00000293780 OSBPP22059 807 aa17.49■□□□□ 0.39
CHRNE-201ENST00000293780 BCAR1P56945 870 aa17.49■□□□□ 0.39
CHRNE-201ENST00000293780 KRT72Q14CN4 511 aa17.49■□□□□ 0.39
CHRNE-201ENST00000293780 CCDC6Q16204 474 aa17.49■□□□□ 0.39
CHRNE-201ENST00000293780 CELF3Q5SZQ8 465 aaKnown RBP17.49■□□□□ 0.39
CHRNE-201ENST00000293780 WDR78Q5VTH9 848 aa17.49■□□□□ 0.39
CHRNE-201ENST00000293780 TRMT10BQ6PF06 316 aaKnown RBP17.49■□□□□ 0.39
CHRNE-201ENST00000293780 TREML1Q86YW5 311 aa17.49■□□□□ 0.39
CHRNE-201ENST00000293780 MPP5Q8N3R9 675 aa17.49■□□□□ 0.39
CHRNE-201ENST00000293780 SPATA33Q96N06 139 aa17.49■□□□□ 0.39
CHRNE-201ENST00000293780 ZFATQ9P243 1243 aa17.49■□□□□ 0.39
CHRNE-201ENST00000293780 MARCOQ9UEW3 520 aaPredicted RBP17.49■□□□□ 0.39
CHRNE-201ENST00000293780 LOC285556D6RIA3 1793 aa17.49■□□□□ 0.39
CHRNE-201ENST00000293780 SSC5DA1L4H1 1573 aa17.49■□□□□ 0.39
CHRNE-201ENST00000293780 APOL1O14791 398 aa17.48■□□□□ 0.39
CHRNE-201ENST00000293780 GAS2O43903 313 aaKnown RBP17.48■□□□□ 0.39
CHRNE-201ENST00000293780 SPAG6O75602 509 aa17.48■□□□□ 0.39
CHRNE-201ENST00000293780 LMNAP02545 664 aaKnown RBP17.48■□□□□ 0.39
CHRNE-201ENST00000293780 CALRP27797 417 aaKnown RBP17.48■□□□□ 0.39
CHRNE-201ENST00000293780 TMPRSS15P98073 1019 aa17.48■□□□□ 0.39
CHRNE-201ENST00000293780 SLC10A6Q3KNW5 377 aa17.48■□□□□ 0.39
CHRNE-201ENST00000293780 SH3D19Q5HYK7 790 aa17.48■□□□□ 0.39
CHRNE-201ENST00000293780 CCDC62Q6P9F0 684 aa17.48■□□□□ 0.39
CHRNE-201ENST00000293780 ARID3BQ8IVW6 561 aaPredicted RBP17.48■□□□□ 0.39
CHRNE-201ENST00000293780 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.48■□□□□ 0.39
CHRNE-201ENST00000293780 ACAP3Q96P50 834 aa17.48■□□□□ 0.39
CHRNE-201ENST00000293780 C20orf27Q9GZN8 174 aa17.48■□□□□ 0.39
CHRNE-201ENST00000293780 IFT122Q9HBG6 1241 aa17.48■□□□□ 0.39
CHRNE-201ENST00000293780 PCDH18Q9HCL0 1135 aa17.48■□□□□ 0.39
CHRNE-201ENST00000293780 GGA3Q9NZ52 723 aa17.48■□□□□ 0.39
CHRNE-201ENST00000293780 SLC15A5A6NIM6 579 aa17.48■□□□□ 0.39
CHRNE-201ENST00000293780 KRT37O76014 449 aa17.48■□□□□ 0.39
CHRNE-201ENST00000293780 METTL18O95568 372 aa17.48■□□□□ 0.39
CHRNE-201ENST00000293780 RARBP10826 455 aa17.48■□□□□ 0.39
CHRNE-201ENST00000293780 PEX19P40855 299 aa17.48■□□□□ 0.39
CHRNE-201ENST00000293780 TUBP50607 506 aa17.48■□□□□ 0.39
CHRNE-201ENST00000293780 CHI3L2Q15782 390 aa17.48■□□□□ 0.39
CHRNE-201ENST00000293780 MUM1Q2TAK8 710 aa17.48■□□□□ 0.39
CHRNE-201ENST00000293780 SNX30Q5VWJ9 437 aa17.48■□□□□ 0.39
CHRNE-201ENST00000293780 UNC5AQ6ZN44 842 aa17.48■□□□□ 0.39
CHRNE-201ENST00000293780 PLPPR4Q7Z2D5 763 aa17.48■□□□□ 0.39
CHRNE-201ENST00000293780 TEX9Q8N6V9 391 aa17.48■□□□□ 0.39
CHRNE-201ENST00000293780 SPON1Q9HCB6 807 aa17.48■□□□□ 0.39
CHRNE-201ENST00000293780 PPME1Q9Y570 386 aa17.48■□□□□ 0.39
CHRNE-201ENST00000293780 HMX2A2RU54 273 aa17.47■□□□□ 0.39
CHRNE-201ENST00000293780 DPPA5A6NC42 116 aa17.47■□□□□ 0.39
CHRNE-201ENST00000293780 KLF11O14901 512 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms