RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 L1CAMP32004 1257 aa20.08■□□□□ 0.8
BRAF-201ENST00000288602 FLT3LGP49771 235 aa20.08■□□□□ 0.8
BRAF-201ENST00000288602 SNX16P57768 344 aa20.08■□□□□ 0.8
BRAF-201ENST00000288602 GJA9P57773 515 aa20.08■□□□□ 0.8
BRAF-201ENST00000288602 MDH1BQ5I0G3 518 aa20.08■□□□□ 0.8
BRAF-201ENST00000288602 CEP128Q6ZU80 1094 aa20.08■□□□□ 0.8
BRAF-201ENST00000288602 PAQR9Q6ZVX9 377 aa20.08■□□□□ 0.8
BRAF-201ENST00000288602 NETO2Q8NC67 525 aa20.08■□□□□ 0.8
BRAF-201ENST00000288602 FBXO36Q8NEA4 188 aa20.08■□□□□ 0.8
BRAF-201ENST00000288602 C11orf84Q9BUA3 381 aaPredicted RBP20.08■□□□□ 0.8
BRAF-201ENST00000288602 AGO3Q9H9G7 860 aaKnown RBP20.08■□□□□ 0.8
BRAF-201ENST00000288602 MFHAS1Q9Y4C4 1052 aa20.08■□□□□ 0.8
BRAF-201ENST00000288602 TRPV2Q9Y5S1 764 aa20.08■□□□□ 0.8
BRAF-201ENST00000288602 NR2E3Q9Y5X4 410 aa20.08■□□□□ 0.8
BRAF-201ENST00000288602 PTPN1P18031 435 aaKnown RBP20.07■□□□□ 0.8
BRAF-201ENST00000288602 CYP2F1P24903 491 aa20.07■□□□□ 0.8
BRAF-201ENST00000288602 ARL4CP56559 192 aa20.07■□□□□ 0.8
BRAF-201ENST00000288602 RNF187Q5TA31 235 aaPredicted RBP20.07■□□□□ 0.8
BRAF-201ENST00000288602 FAM131BQ86XD5 332 aa20.07■□□□□ 0.8
BRAF-201ENST00000288602 DEFB106AQ8N104 65 aa20.07■□□□□ 0.8
BRAF-201ENST00000288602 RNF169Q8NCN4 708 aa20.07■□□□□ 0.8
BRAF-201ENST00000288602 C3orf58Q8NDZ4 430 aa20.07■□□□□ 0.8
BRAF-201ENST00000288602 TEKT4Q8WW24 435 aa20.07■□□□□ 0.8
BRAF-201ENST00000288602 MAML1Q92585 1016 aa20.07■□□□□ 0.8
BRAF-201ENST00000288602 MDM4O15151 490 aa20.07■□□□□ 0.8
BRAF-201ENST00000288602 SPAG7O75391 227 aa20.07■□□□□ 0.8
BRAF-201ENST00000288602 WARSP23381 471 aaKnown RBP20.07■□□□□ 0.8
BRAF-201ENST00000288602 LRPAP1P30533 357 aa20.07■□□□□ 0.8
BRAF-201ENST00000288602 LIG3P49916 1009 aa20.07■□□□□ 0.8
BRAF-201ENST00000288602 CAP1Q01518 475 aa20.07■□□□□ 0.8
BRAF-201ENST00000288602 GBE1Q04446 702 aa20.07■□□□□ 0.8
BRAF-201ENST00000288602 SLC20A2Q08357 652 aa20.07■□□□□ 0.8
BRAF-201ENST00000288602 IGDCC3Q8IVU1 814 aa20.07■□□□□ 0.8
BRAF-201ENST00000288602 TOP6BLQ8N6T0 577 aa20.07■□□□□ 0.8
BRAF-201ENST00000288602 MED10Q9BTT4 135 aa20.07■□□□□ 0.8
BRAF-201ENST00000288602 AP4E1Q9UPM8 1137 aa20.07■□□□□ 0.8
BRAF-201ENST00000288602 C5orf60A6NFR6 353 aa20.06■□□□□ 0.8
BRAF-201ENST00000288602 CASTOR2A6NHX0 329 aa20.06■□□□□ 0.8
BRAF-201ENST00000288602 STIP1P31948 543 aaKnown RBP20.06■□□□□ 0.8
BRAF-201ENST00000288602 PTPN9P43378 593 aa20.06■□□□□ 0.8
BRAF-201ENST00000288602 SCNN1GP51170 649 aa20.06■□□□□ 0.8
BRAF-201ENST00000288602 MAP3K7CLP57077 242 aa20.06■□□□□ 0.8
BRAF-201ENST00000288602 INHBEP58166 350 aa20.06■□□□□ 0.8
BRAF-201ENST00000288602 SLC10A2Q12908 348 aaPredicted RBP20.06■□□□□ 0.8
BRAF-201ENST00000288602 PKN2Q16513 984 aaKnown RBP20.06■□□□□ 0.8
BRAF-201ENST00000288602 DCAF6Q58WW2 860 aa20.06■□□□□ 0.8
BRAF-201ENST00000288602 SLC9A4Q6AI14 798 aa20.06■□□□□ 0.8
BRAF-201ENST00000288602 C3orf62Q6ZUJ4 267 aa20.06■□□□□ 0.8
BRAF-201ENST00000288602 CTU1Q7Z7A3 348 aaKnown RBP20.06■□□□□ 0.8
BRAF-201ENST00000288602 SENP8Q96LD8 212 aa20.06■□□□□ 0.8
BRAF-201ENST00000288602 DUSP16Q9BY84 665 aa20.06■□□□□ 0.8
BRAF-201ENST00000288602 NRDE2Q9H7Z3 1164 aa20.06■□□□□ 0.8
BRAF-201ENST00000288602 MTMR10Q9NXD2 777 aa20.06■□□□□ 0.8
BRAF-201ENST00000288602 DDX43Q9NXZ2 648 aaKnown RBP20.06■□□□□ 0.8
BRAF-201ENST00000288602 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.06■□□□□ 0.8
BRAF-201ENST00000288602 I3L4J1 428 aa20.05■□□□□ 0.8
BRAF-201ENST00000288602 DESP17661 470 aa20.05■□□□□ 0.8
BRAF-201ENST00000288602 RPL34P49207 117 aaKnown RBP20.05■□□□□ 0.8
BRAF-201ENST00000288602 PAN2Q504Q3 1202 aaKnown RBP20.05■□□□□ 0.8
BRAF-201ENST00000288602 GKAP1Q5VSY0 366 aaPredicted RBP20.05■□□□□ 0.8
BRAF-201ENST00000288602 CENPIQ92674 756 aaPredicted RBP20.05■□□□□ 0.8
BRAF-201ENST00000288602 FAF2Q96CS3 445 aa20.05■□□□□ 0.8
BRAF-201ENST00000288602 CABS1Q96KC9 395 aa20.05■□□□□ 0.8
BRAF-201ENST00000288602 KCTD15Q96SI1 283 aaPredicted RBP20.05■□□□□ 0.8
BRAF-201ENST00000288602 SENP6Q9GZR1 1112 aaPredicted RBP20.05■□□□□ 0.8
BRAF-201ENST00000288602 RAB6BQ9NRW1 208 aa20.05■□□□□ 0.8
BRAF-201ENST00000288602 CHMP2BQ9UQN3 213 aa20.05■□□□□ 0.8
BRAF-201ENST00000288602 SCN10AQ9Y5Y9 1956 aa20.05■□□□□ 0.8
BRAF-201ENST00000288602 ARL5CA6NH57 179 aa20.05■□□□□ 0.8
BRAF-201ENST00000288602 XPO1O14980 1071 aaKnown RBP20.05■□□□□ 0.8
BRAF-201ENST00000288602 CLEC20AQ6ZU45 233 aa20.05■□□□□ 0.8
BRAF-201ENST00000288602 PAXIP1Q6ZW49 1069 aaPredicted RBP20.05■□□□□ 0.8
BRAF-201ENST00000288602 HNRNPABQ99729 332 aaKnown RBP20.05■□□□□ 0.8
BRAF-201ENST00000288602 CRTAC1Q9NQ79 661 aa20.05■□□□□ 0.8
BRAF-201ENST00000288602 ETNK2Q9NVF9 386 aa20.05■□□□□ 0.8
BRAF-201ENST00000288602 ABT1Q9ULW3 272 aaKnown RBP20.05■□□□□ 0.8
BRAF-201ENST00000288602 KIAA0754O94854 1291 aa20.04■□□□□ 0.8
BRAF-201ENST00000288602 ZBED1O96006 694 aa20.04■□□□□ 0.8
BRAF-201ENST00000288602 THP07101 528 aa20.04■□□□□ 0.8
BRAF-201ENST00000288602 KRT15P19012 456 aa20.04■□□□□ 0.8
BRAF-201ENST00000288602 THPOP40225 353 aa20.04■□□□□ 0.8
BRAF-201ENST00000288602 SULT1E1P49888 294 aa20.04■□□□□ 0.8
BRAF-201ENST00000288602 PRKCZQ05513 592 aa20.04■□□□□ 0.8
BRAF-201ENST00000288602 C6orf89Q6UWU4 347 aa20.04■□□□□ 0.8
BRAF-201ENST00000288602 HFE2Q6ZVN8 426 aa20.04■□□□□ 0.8
BRAF-201ENST00000288602 TADA2BQ86TJ2 420 aa20.04■□□□□ 0.8
BRAF-201ENST00000288602 CACNA2D3Q8IZS8 1091 aa20.04■□□□□ 0.8
BRAF-201ENST00000288602 PDIK1LQ8N165 341 aa20.04■□□□□ 0.8
BRAF-201ENST00000288602 C4orf33Q8N1A6 199 aa20.04■□□□□ 0.8
BRAF-201ENST00000288602 CCDC110Q8TBZ0 833 aa20.04■□□□□ 0.8
BRAF-201ENST00000288602 FBF1Q8TES7 1133 aa20.04■□□□□ 0.8
BRAF-201ENST00000288602 HSFY1Q96LI6 401 aa20.04■□□□□ 0.8
BRAF-201ENST00000288602 KCNK16Q96T55 309 aa20.04■□□□□ 0.8
BRAF-201ENST00000288602 ELAC2Q9BQ52 826 aaKnown RBP20.04■□□□□ 0.8
BRAF-201ENST00000288602 ZNF670Q9BS34 389 aa20.04■□□□□ 0.8
BRAF-201ENST00000288602 RABGEF1Q9UJ41 708 aa20.04■□□□□ 0.8
BRAF-201ENST00000288602 A0A1W2PPM1 405 aa20.04■□□□□ 0.8
BRAF-201ENST00000288602 TCP11X1B4DZS4 312 aa20.04■□□□□ 0.8
BRAF-201ENST00000288602 GOT1P17174 413 aa20.04■□□□□ 0.8
BRAF-201ENST00000288602 NPR3P17342 541 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms