RNA–Protein interactions for RNA: ENST00000287437.7

NSMCE2-201, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE2, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-201ENST00000287437 ZNF419Q96HQ0 510 aaPredicted RBP11.39□□□□□ -0.59
NSMCE2-201ENST00000287437 SMG1Q96Q15 3661 aaKnown RBP11.39□□□□□ -0.59
NSMCE2-201ENST00000287437 TRIM9Q9C026 710 aa11.39□□□□□ -0.59
NSMCE2-201ENST00000287437 CCDC86Q9H6F5 360 aaKnown RBP11.39□□□□□ -0.59
NSMCE2-201ENST00000287437 HSPBP1Q9NZL4 362 aa11.39□□□□□ -0.59
NSMCE2-201ENST00000287437 GMIPQ9P107 970 aa11.39□□□□□ -0.59
NSMCE2-201ENST00000287437 SMC3Q9UQE7 1217 aa11.39□□□□□ -0.59
NSMCE2-201ENST00000287437 STARD13Q9Y3M8 1113 aa11.39□□□□□ -0.59
NSMCE2-201ENST00000287437 ADAMTS20P59510 1910 aa11.39□□□□□ -0.59
NSMCE2-201ENST00000287437 PRRT4C9JH25 899 aa11.38□□□□□ -0.59
NSMCE2-201ENST00000287437 NEDD8-MDP1E9PL57 170 aa11.38□□□□□ -0.59
NSMCE2-201ENST00000287437 RTN3O95197 1032 aaPredicted RBP11.38□□□□□ -0.59
NSMCE2-201ENST00000287437 C7P10643 843 aa11.38□□□□□ -0.59
NSMCE2-201ENST00000287437 TNNI1P19237 187 aa11.38□□□□□ -0.59
NSMCE2-201ENST00000287437 TXLNAP40222 546 aa11.38□□□□□ -0.59
NSMCE2-201ENST00000287437 SLC5A3P53794 718 aa11.38□□□□□ -0.59
NSMCE2-201ENST00000287437 RABEP1Q15276 862 aa11.38□□□□□ -0.59
NSMCE2-201ENST00000287437 SYCP2LQ5T4T6 812 aa11.38□□□□□ -0.59
NSMCE2-201ENST00000287437 SDE2Q6IQ49 451 aa11.38□□□□□ -0.59
NSMCE2-201ENST00000287437 KIAA1324Q6UXG2 1013 aaKnown RBP11.38□□□□□ -0.59
NSMCE2-201ENST00000287437 CCNI2Q6ZMN8 369 aaPredicted RBP11.38□□□□□ -0.59
NSMCE2-201ENST00000287437 TOGARAM2Q6ZUX3 1019 aa11.38□□□□□ -0.59
NSMCE2-201ENST00000287437 SLCO6A1Q86UG4 719 aa11.38□□□□□ -0.59
NSMCE2-201ENST00000287437 RDH13Q8NBN7 331 aa11.38□□□□□ -0.59
NSMCE2-201ENST00000287437 HNRNPLLQ8WVV9 542 aaKnown RBP11.38□□□□□ -0.59
NSMCE2-201ENST00000287437 HPS3Q969F9 1004 aa11.38□□□□□ -0.59
NSMCE2-201ENST00000287437 MRGPRX1Q96LB2 322 aa11.38□□□□□ -0.59
NSMCE2-201ENST00000287437 GABRG3Q99928 467 aa11.38□□□□□ -0.59
NSMCE2-201ENST00000287437 PANK2Q9BZ23 570 aa11.38□□□□□ -0.59
NSMCE2-201ENST00000287437 NACA2Q9H009 215 aa11.38□□□□□ -0.59
NSMCE2-201ENST00000287437 FAM124BQ9H5Z6 455 aaPredicted RBP11.38□□□□□ -0.59
NSMCE2-201ENST00000287437 PPP4R2Q9NY27 417 aa11.38□□□□□ -0.59
NSMCE2-201ENST00000287437 CACNA2D2Q9NY47 1150 aa11.38□□□□□ -0.59
NSMCE2-201ENST00000287437 NXF1Q9UBU9 619 aaKnown RBP11.38□□□□□ -0.59
NSMCE2-201ENST00000287437 SUSD2Q9UGT4 822 aa11.38□□□□□ -0.59
NSMCE2-201ENST00000287437 CEP192Q8TEP8 1941 aa11.37□□□□□ -0.59
NSMCE2-201ENST00000287437 A0A087X0B3 334 aa11.37□□□□□ -0.59
NSMCE2-201ENST00000287437 WASH3PC4AMC7 463 aa11.37□□□□□ -0.59
NSMCE2-201ENST00000287437 CACNG3O60359 315 aa11.37□□□□□ -0.59
NSMCE2-201ENST00000287437 ZDHHC11BP0C7U3 371 aa11.37□□□□□ -0.59
NSMCE2-201ENST00000287437 TYRP14679 529 aa11.37□□□□□ -0.59
NSMCE2-201ENST00000287437 GNSP15586 552 aa11.37□□□□□ -0.59
NSMCE2-201ENST00000287437 HOXD13P35453 343 aa11.37□□□□□ -0.59
NSMCE2-201ENST00000287437 STAT6P42226 847 aa11.37□□□□□ -0.59
NSMCE2-201ENST00000287437 PGFP49763 221 aa11.37□□□□□ -0.59
NSMCE2-201ENST00000287437 TUBP50607 506 aa11.37□□□□□ -0.59
NSMCE2-201ENST00000287437 MYL6P60660 151 aa11.37□□□□□ -0.59
NSMCE2-201ENST00000287437 SNRNP35Q16560 246 aaKnown RBP11.37□□□□□ -0.59
NSMCE2-201ENST00000287437 WDR45BQ5MNZ6 344 aa11.37□□□□□ -0.59
NSMCE2-201ENST00000287437 SNX30Q5VWJ9 437 aa11.37□□□□□ -0.59
NSMCE2-201ENST00000287437 CCDC73Q6ZRK6 1079 aa11.37□□□□□ -0.59
NSMCE2-201ENST00000287437 TPGS1Q6ZTW0 290 aa11.37□□□□□ -0.59
NSMCE2-201ENST00000287437 FAM35AQ86V20 835 aa11.37□□□□□ -0.59
NSMCE2-201ENST00000287437 SCFD1Q8WVM8 642 aa11.37□□□□□ -0.59
NSMCE2-201ENST00000287437 FOXJ1Q92949 421 aa11.37□□□□□ -0.59
NSMCE2-201ENST00000287437 RNF25Q96BH1 459 aaPredicted RBP11.37□□□□□ -0.59
NSMCE2-201ENST00000287437 CCDC127Q96BQ5 260 aa11.37□□□□□ -0.59
NSMCE2-201ENST00000287437 CGRRF1Q99675 332 aa11.37□□□□□ -0.59
NSMCE2-201ENST00000287437 DUSP9Q99956 384 aaKnown RBP11.37□□□□□ -0.59
NSMCE2-201ENST00000287437 MED10Q9BTT4 135 aa11.37□□□□□ -0.59
NSMCE2-201ENST00000287437 BBS2Q9BXC9 721 aa11.37□□□□□ -0.59
NSMCE2-201ENST00000287437 METRNQ9UJH8 293 aa11.37□□□□□ -0.59
NSMCE2-201ENST00000287437 APOBEC2Q9Y235 224 aaKnown RBP11.37□□□□□ -0.59
NSMCE2-201ENST00000287437 RAXQ9Y2V3 346 aa11.37□□□□□ -0.59
NSMCE2-201ENST00000287437 SRPRBQ9Y5M8 271 aaKnown RBP11.37□□□□□ -0.59
NSMCE2-201ENST00000287437 VPS37CA5D8V6 355 aaPredicted RBP11.36□□□□□ -0.59
NSMCE2-201ENST00000287437 MEI4A8MW99 385 aa11.36□□□□□ -0.59
NSMCE2-201ENST00000287437 GREM1O60565 184 aa11.36□□□□□ -0.59
NSMCE2-201ENST00000287437 TLR5O60602 858 aa11.36□□□□□ -0.59
NSMCE2-201ENST00000287437 CBFA2T3O75081 653 aa11.36□□□□□ -0.59
NSMCE2-201ENST00000287437 TBX18O95935 607 aa11.36□□□□□ -0.59
NSMCE2-201ENST00000287437 FAM163BP0C2L3 166 aa11.36□□□□□ -0.59
NSMCE2-201ENST00000287437 CD6P30203 668 aa11.36□□□□□ -0.59
NSMCE2-201ENST00000287437 CDH8P55286 799 aa11.36□□□□□ -0.59
NSMCE2-201ENST00000287437 CEBPZQ03701 1054 aaKnown RBP11.36□□□□□ -0.59
NSMCE2-201ENST00000287437 PAQR9Q6ZVX9 377 aa11.36□□□□□ -0.59
NSMCE2-201ENST00000287437 STXBP4Q6ZWJ1 553 aa11.36□□□□□ -0.59
NSMCE2-201ENST00000287437 CCDC65Q8IXS2 484 aa11.36□□□□□ -0.59
NSMCE2-201ENST00000287437 ZCCHC9Q8N567 271 aaKnown RBP11.36□□□□□ -0.59
NSMCE2-201ENST00000287437 SETD7Q8WTS6 366 aaKnown RBP11.36□□□□□ -0.59
NSMCE2-201ENST00000287437 BHMTQ93088 406 aa11.36□□□□□ -0.59
NSMCE2-201ENST00000287437 SMARCD1Q96GM5 515 aa11.36□□□□□ -0.59
NSMCE2-201ENST00000287437 TOE1Q96GM8 510 aaKnown RBP11.36□□□□□ -0.59
NSMCE2-201ENST00000287437 BBC3Q96PG8 261 aaPredicted RBP11.36□□□□□ -0.59
NSMCE2-201ENST00000287437 XPO6Q96QU8 1125 aaKnown RBP11.36□□□□□ -0.59
NSMCE2-201ENST00000287437 XYLT2Q9H1B5 865 aa11.36□□□□□ -0.59
NSMCE2-201ENST00000287437 SMYD3Q9H7B4 428 aa11.36□□□□□ -0.59
NSMCE2-201ENST00000287437 IL21RQ9HBE5 538 aa11.36□□□□□ -0.59
NSMCE2-201ENST00000287437 KIAA1586Q9HCI6 787 aa11.36□□□□□ -0.59
NSMCE2-201ENST00000287437 DMAP1Q9NPF5 467 aaPredicted RBP11.36□□□□□ -0.59
NSMCE2-201ENST00000287437 KRT82Q9NSB4 513 aa11.36□□□□□ -0.59
NSMCE2-201ENST00000287437 IL37Q9NZH6 218 aa11.36□□□□□ -0.59
NSMCE2-201ENST00000287437 PCOLCE2Q9UKZ9 415 aa11.36□□□□□ -0.59
NSMCE2-201ENST00000287437 MYO18AQ92614 2054 aaKnown RBP11.36□□□□□ -0.59
NSMCE2-201ENST00000287437 ATP8B3O60423 1300 aa11.35□□□□□ -0.59
NSMCE2-201ENST00000287437 A0A1B0GTW7 788 aa11.35□□□□□ -0.59
NSMCE2-201ENST00000287437 FAM92AA1XBS5 289 aa11.35□□□□□ -0.59
NSMCE2-201ENST00000287437 AP1G2O75843 785 aa11.35□□□□□ -0.59
NSMCE2-201ENST00000287437 CLSTN1O94985 981 aa11.35□□□□□ -0.59
NSMCE2-201ENST00000287437 STAU1O95793 577 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms