RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 TMEM53Q6P2H8 277 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 DPH6Q7L8W6 267 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 HELQQ8TDG4 1101 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 WRNIP1Q96S55 665 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 CORO1BQ9BR76 489 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 WDR18Q9BV38 432 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 CCDC106Q9BWC9 280 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 GLIS2Q9BZE0 524 aaPredicted RBP13.29□□□□□ -0.28
HERC6-202ENST00000273960 SENP6Q9GZR1 1112 aaPredicted RBP13.29□□□□□ -0.28
HERC6-202ENST00000273960 COL22A1Q8NFW1 1626 aaPredicted RBP13.29□□□□□ -0.28
HERC6-202ENST00000273960 ARP10275 920 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 MYCLP12524 364 aaPredicted RBP13.29□□□□□ -0.28
HERC6-202ENST00000273960 ZNF24P17028 368 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 GJA8P48165 433 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 TMED10P49755 219 aaKnown RBP13.29□□□□□ -0.28
HERC6-202ENST00000273960 NUDT2P50583 147 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 ATG16L1Q676U5 607 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 NPNTQ6UXI9 565 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 SV2AQ7L0J3 742 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 HAUS6Q7Z4H7 955 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 DAW1Q8N136 415 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 FNDC8Q8TC99 324 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 FAM213AQ9BRX8 229 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 XAB2Q9HCS7 855 aaKnown RBP13.29□□□□□ -0.28
HERC6-202ENST00000273960 HBS1LQ9Y450 684 aaKnown RBP13.29□□□□□ -0.28
HERC6-202ENST00000273960 TELO2Q9Y4R8 837 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 NRAPQ86VF7 1730 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 STRNO43815 780 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 GRIN3BO60391 1043 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 MTA2O94776 668 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 CD48P09326 243 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 ETV4P43268 484 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 STAT2P52630 851 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 SH3BGRP55822 239 aaPredicted RBP13.29□□□□□ -0.28
HERC6-202ENST00000273960 LMNB2Q03252 620 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 MAMLD1Q13495 774 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 SEZ6Q53EL9 994 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 KRT39Q6A163 491 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 TATDN1Q6P1N9 297 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 SPOCD1Q6ZMY3 1216 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 HSPH1Q92598 858 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 SLITRK1Q96PX8 696 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 POLR3CQ9BUI4 534 aaPredicted RBP13.29□□□□□ -0.28
HERC6-202ENST00000273960 PCDH18Q9HCL0 1135 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 CNTNAP2Q9UHC6 1331 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 TNRC6CQ9HCJ0 1690 aaKnown RBP13.28□□□□□ -0.28
HERC6-202ENST00000273960 ATRNL1Q5VV63 1379 aa13.28□□□□□ -0.28
HERC6-202ENST00000273960 hCG_1984214I3L0E3 225 aa13.28□□□□□ -0.28
HERC6-202ENST00000273960 NDUFB5O43674 189 aa13.28□□□□□ -0.28
HERC6-202ENST00000273960 FAM58BPP0C7Q3 252 aa13.28□□□□□ -0.28
HERC6-202ENST00000273960 HOXD12P35452 270 aa13.28□□□□□ -0.28
HERC6-202ENST00000273960 CPOXP36551 454 aa13.28□□□□□ -0.28
HERC6-202ENST00000273960 ZNF713Q8N859 430 aaPredicted RBP13.28□□□□□ -0.28
HERC6-202ENST00000273960 SMYD1Q8NB12 490 aa13.28□□□□□ -0.28
HERC6-202ENST00000273960 FBXL13Q8NEE6 735 aa13.28□□□□□ -0.28
HERC6-202ENST00000273960 DDX1Q92499 740 aaKnown RBP13.28□□□□□ -0.28
HERC6-202ENST00000273960 AKT1S1Q96B36 256 aa13.28□□□□□ -0.28
HERC6-202ENST00000273960 OXCT2Q9BYC2 517 aaPredicted RBP13.28□□□□□ -0.28
HERC6-202ENST00000273960 Q9H521 79 aa13.28□□□□□ -0.28
HERC6-202ENST00000273960 DMTF1Q9Y222 760 aa13.28□□□□□ -0.28
HERC6-202ENST00000273960 TMEM221A6NGB7 291 aa13.28□□□□□ -0.28
HERC6-202ENST00000273960 YDJCA8MPS7 323 aa13.28□□□□□ -0.28
HERC6-202ENST00000273960 HOXA7P31268 230 aaPredicted RBP13.28□□□□□ -0.28
HERC6-202ENST00000273960 SOX11P35716 441 aa13.28□□□□□ -0.28
HERC6-202ENST00000273960 HALP42357 657 aa13.28□□□□□ -0.28
HERC6-202ENST00000273960 EIF2B2P49770 351 aaKnown RBP13.28□□□□□ -0.28
HERC6-202ENST00000273960 PLA2G4FQ68DD2 849 aa13.28□□□□□ -0.28
HERC6-202ENST00000273960 KRT80Q6KB66 452 aa13.28□□□□□ -0.28
HERC6-202ENST00000273960 C16orf87Q6PH81 154 aa13.28□□□□□ -0.28
HERC6-202ENST00000273960 RFX6Q8HWS3 928 aa13.28□□□□□ -0.28
HERC6-202ENST00000273960 WDR75Q8IWA0 830 aaKnown RBP13.28□□□□□ -0.28
HERC6-202ENST00000273960 UNC5BQ8IZJ1 945 aa13.28□□□□□ -0.28
HERC6-202ENST00000273960 ZNF577Q9BSK1 485 aa13.28□□□□□ -0.28
HERC6-202ENST00000273960 ZNF341Q9BYN7 854 aa13.28□□□□□ -0.28
HERC6-202ENST00000273960 RNPEPQ9H4A4 650 aa13.28□□□□□ -0.28
HERC6-202ENST00000273960 C1orf112Q9NSG2 853 aa13.28□□□□□ -0.28
HERC6-202ENST00000273960 TMA7Q9Y2S6 64 aaKnown RBP13.28□□□□□ -0.28
HERC6-202ENST00000273960 CYP3A7-CYP3A51PA0A087WV96 503 aa13.27□□□□□ -0.28
HERC6-202ENST00000273960 SIN3BO75182 1162 aa13.27□□□□□ -0.28
HERC6-202ENST00000273960 CAPN15O75808 1086 aa13.27□□□□□ -0.28
HERC6-202ENST00000273960 ITGA9Q13797 1035 aa13.27□□□□□ -0.28
HERC6-202ENST00000273960 HNRNPDQ14103 355 aaKnown RBP13.27□□□□□ -0.28
HERC6-202ENST00000273960 PPM1LQ5SGD2 360 aa13.27□□□□□ -0.28
HERC6-202ENST00000273960 CASC4Q6P4E1 433 aa13.27□□□□□ -0.28
HERC6-202ENST00000273960 ZNF410Q86VK4 478 aa13.27□□□□□ -0.28
HERC6-202ENST00000273960 PPIL6Q8IXY8 311 aa13.27□□□□□ -0.28
HERC6-202ENST00000273960 MYO1HQ8N1T3 1032 aa13.27□□□□□ -0.28
HERC6-202ENST00000273960 PQLC1Q8N2U9 271 aa13.27□□□□□ -0.28
HERC6-202ENST00000273960 HSD17B14Q9BPX1 270 aa13.27□□□□□ -0.28
HERC6-202ENST00000273960 GPAMQ9HCL2 828 aa13.27□□□□□ -0.28
HERC6-202ENST00000273960 NDUFA13Q9P0J0 144 aa13.27□□□□□ -0.28
HERC6-202ENST00000273960 P4HA1P13674 534 aa13.27□□□□□ -0.28
HERC6-202ENST00000273960 CDH2P19022 906 aaPredicted RBP13.27□□□□□ -0.28
HERC6-202ENST00000273960 TMEM214Q6NUQ4 689 aaKnown RBP13.27□□□□□ -0.28
HERC6-202ENST00000273960 GABPB2Q8TAK5 448 aaPredicted RBP13.27□□□□□ -0.28
HERC6-202ENST00000273960 ACCSQ96QU6 501 aa13.27□□□□□ -0.28
HERC6-202ENST00000273960 CDRT15Q96T59 188 aa13.27□□□□□ -0.28
HERC6-202ENST00000273960 UNC45AQ9H3U1 944 aa13.27□□□□□ -0.28
HERC6-202ENST00000273960 EBF1Q9UH73 591 aa13.27□□□□□ -0.28
HERC6-202ENST00000273960 PRR12Q9ULL5 1215 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms