RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 CYP4A22Q5TCH4 519 aa8.21□□□□□ -1.09
LIMD1-201ENST00000273317 ANKRD49Q8WVL7 239 aa8.21□□□□□ -1.09
LIMD1-201ENST00000273317 APOPT1Q96IL0 206 aa8.21□□□□□ -1.09
LIMD1-201ENST00000273317 CELF4Q9BZC1 486 aaKnown RBP8.21□□□□□ -1.09
LIMD1-201ENST00000273317 STK39Q9UEW8 545 aa8.21□□□□□ -1.09
LIMD1-201ENST00000273317 V9GYQ6 96 aa8.21□□□□□ -1.09
LIMD1-201ENST00000273317 GRAP2O75791 330 aa8.21□□□□□ -1.09
LIMD1-201ENST00000273317 SNUPNO95149 360 aaKnown RBP8.21□□□□□ -1.09
LIMD1-201ENST00000273317 MED26O95402 600 aa8.21□□□□□ -1.09
LIMD1-201ENST00000273317 ALADP13716 330 aa8.21□□□□□ -1.09
LIMD1-201ENST00000273317 ACOT2P49753 483 aa8.21□□□□□ -1.09
LIMD1-201ENST00000273317 TMEM26Q6ZUK4 368 aa8.21□□□□□ -1.09
LIMD1-201ENST00000273317 ENKURQ8TC29 256 aa8.21□□□□□ -1.09
LIMD1-201ENST00000273317 DPF2Q92785 391 aa8.21□□□□□ -1.09
LIMD1-201ENST00000273317 CGRRF1Q99675 332 aa8.21□□□□□ -1.09
LIMD1-201ENST00000273317 ADGRE3Q9BY15 652 aa8.21□□□□□ -1.09
LIMD1-201ENST00000273317 RGS18Q9NS28 235 aa8.21□□□□□ -1.09
LIMD1-201ENST00000273317 ZNF862O60290 1169 aa8.21□□□□□ -1.09
LIMD1-201ENST00000273317 IL6P05231 212 aa8.21□□□□□ -1.09
LIMD1-201ENST00000273317 ANXA6P08133 673 aa8.21□□□□□ -1.09
LIMD1-201ENST00000273317 TPBGLP0DKB5 382 aa8.21□□□□□ -1.09
LIMD1-201ENST00000273317 H2AFXP16104 143 aaPredicted RBP8.21□□□□□ -1.09
LIMD1-201ENST00000273317 SLC16A1P53985 500 aa8.21□□□□□ -1.09
LIMD1-201ENST00000273317 HS6ST3Q8IZP7 471 aa8.21□□□□□ -1.09
LIMD1-201ENST00000273317 SYNE4Q8N205 404 aa8.21□□□□□ -1.09
LIMD1-201ENST00000273317 FBXO36Q8NEA4 188 aa8.21□□□□□ -1.09
LIMD1-201ENST00000273317 DLG3Q92796 817 aa8.21□□□□□ -1.09
LIMD1-201ENST00000273317 SEPT5Q99719 369 aaPredicted RBP8.21□□□□□ -1.09
LIMD1-201ENST00000273317 C1orf50Q9BV19 199 aa8.21□□□□□ -1.09
LIMD1-201ENST00000273317 CPVLQ9H3G5 476 aa8.21□□□□□ -1.09
LIMD1-201ENST00000273317 PCDH9Q9HC56 1237 aa8.21□□□□□ -1.09
LIMD1-201ENST00000273317 NWD1Q149M9 1564 aa8.21□□□□□ -1.09
LIMD1-201ENST00000273317 PREX1Q8TCU6 1659 aa8.21□□□□□ -1.09
LIMD1-201ENST00000273317 CD3EAPO15446 510 aaKnown RBP8.21□□□□□ -1.1
LIMD1-201ENST00000273317 HOXB6P17509 224 aaKnown RBP8.21□□□□□ -1.1
LIMD1-201ENST00000273317 CHRM3P20309 590 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 PON1P27169 355 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 GUCA1AP43080 201 aaPredicted RBP8.21□□□□□ -1.1
LIMD1-201ENST00000273317 TAF6P49848 677 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 AQP5P55064 265 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 MYL6P60660 151 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 PRKAA1Q13131 559 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 TIMM50Q3ZCQ8 353 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 STRIP1Q5VSL9 837 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 C10orf53Q8N6V4 93 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 USP33Q8TEY7 942 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 ATP8B4Q8TF62 1192 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 AAASQ9NRG9 546 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 FAM49BQ9NUQ9 324 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 C15orf38-AP3S2A0A0A6YYH1 394 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 NCAM1P13591 858 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 CYP11B1P15538 503 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 ATP6V1B2P21281 511 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 ALDH1A3P47895 512 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 DGUOKQ16854 277 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 OTOAQ7RTW8 1153 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 ARPINQ7Z6K5 226 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 CRAMP1Q96RY5 1269 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 CPNE1Q99829 537 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 TMEM79Q9BSE2 394 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 MAN1C1Q9NR34 630 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 AGPAT3Q9NRZ7 376 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 HBP1O60381 514 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 CACNB2Q08289 660 aaPredicted RBP8.21□□□□□ -1.1
LIMD1-201ENST00000273317 ZCCHC8Q6NZY4 707 aaKnown RBP8.21□□□□□ -1.1
LIMD1-201ENST00000273317 TRIM48Q8IWZ4 208 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 PRKD2Q9BZL6 878 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 TDRD3Q9H7E2 651 aaKnown RBP8.21□□□□□ -1.1
LIMD1-201ENST00000273317 COPS7BQ9H9Q2 264 aaPredicted RBP8.21□□□□□ -1.1
LIMD1-201ENST00000273317 DPP3Q9NY33 737 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 MROH7Q68CQ1 1323 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 ZNF682O95780 498 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 CRABP2P29373 138 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 IFNGR2P38484 337 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 MGAT5Q09328 741 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 KCNMA1Q12791 1236 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 EPS8Q12929 822 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 LPCAT2Q7L5N7 544 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 MXRA8Q9BRK3 442 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 AHSPQ9NZD4 102 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 LMTK2Q8IWU2 1503 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 E9PBE3 544 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 HOXB8P17481 243 aaPredicted RBP8.21□□□□□ -1.1
LIMD1-201ENST00000273317 PGAM1P18669 254 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 TNFRSF8P28908 595 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 RPS7P62081 194 aaKnown RBP8.21□□□□□ -1.1
LIMD1-201ENST00000273317 PLD1Q13393 1074 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 GLB1LQ6UWU2 654 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 ULK2Q8IYT8 1036 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 EID3Q8N140 333 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 SIX5Q8N196 739 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 NAGPAQ9UK23 515 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 TPRKBQ9Y3C4 175 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 F5H5T6 163 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 SERPINE1P05121 402 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 MZF1P28698 734 aaPredicted RBP8.21□□□□□ -1.1
LIMD1-201ENST00000273317 STAT5AP42229 794 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 SARSP49591 514 aaKnown RBP8.21□□□□□ -1.1
LIMD1-201ENST00000273317 XRCC4Q13426 336 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 IZUMO2Q6UXV1 221 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms