RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 MZF1P28698 734 aaPredicted RBP13.66□□□□□ -0.22
PRDM16-201ENST00000270722 LMBRD2Q68DH5 695 aaPredicted RBP13.66□□□□□ -0.22
PRDM16-201ENST00000270722 DYNLL2Q96FJ2 89 aa13.66□□□□□ -0.22
PRDM16-201ENST00000270722 SLC6A15Q9H2J7 730 aa13.66□□□□□ -0.22
PRDM16-201ENST00000270722 UXTQ9UBK9 157 aaPredicted RBP13.65□□□□□ -0.22
PRDM16-201ENST00000270722 RNF103O00237 685 aa13.65□□□□□ -0.22
PRDM16-201ENST00000270722 POMGNT2Q8NAT1 580 aa13.65□□□□□ -0.22
PRDM16-201ENST00000270722 BLOC1S5Q8TDH9 187 aa13.65□□□□□ -0.22
PRDM16-201ENST00000270722 NOL6Q9H6R4 1146 aaKnown RBP13.65□□□□□ -0.22
PRDM16-201ENST00000270722 TMEM63CQ9P1W3 806 aa13.65□□□□□ -0.22
PRDM16-201ENST00000270722 ZBTB22O15209 634 aa13.65□□□□□ -0.22
PRDM16-201ENST00000270722 AKAP10O43572 662 aa13.65□□□□□ -0.22
PRDM16-201ENST00000270722 RAP1GAPP47736 663 aa13.65□□□□□ -0.22
PRDM16-201ENST00000270722 NCAPHQ15003 741 aa13.65□□□□□ -0.22
PRDM16-201ENST00000270722 SPAG16Q8N0X2 631 aa13.65□□□□□ -0.22
PRDM16-201ENST00000270722 SNX24Q9Y343 169 aa13.65□□□□□ -0.22
PRDM16-201ENST00000270722 PCDHGA4Q9Y5G9 962 aa13.65□□□□□ -0.22
PRDM16-201ENST00000270722 COMMD3-BMI1R4GMX3 469 aa13.65□□□□□ -0.22
PRDM16-201ENST00000270722 TIMM44O43615 452 aa13.65□□□□□ -0.22
PRDM16-201ENST00000270722 ITIH2P19823 946 aa13.65□□□□□ -0.22
PRDM16-201ENST00000270722 CHI3L1P36222 383 aaPredicted RBP13.65□□□□□ -0.22
PRDM16-201ENST00000270722 MTSS1LQ765P7 747 aa13.65□□□□□ -0.22
PRDM16-201ENST00000270722 SMYD4Q8IYR2 804 aaPredicted RBP13.65□□□□□ -0.22
PRDM16-201ENST00000270722 NEDD1Q8NHV4 660 aa13.65□□□□□ -0.22
PRDM16-201ENST00000270722 TTC7AQ9ULT0 858 aaPredicted RBP13.65□□□□□ -0.22
PRDM16-201ENST00000270722 TNFAIP8O95379 198 aa13.65□□□□□ -0.22
PRDM16-201ENST00000270722 KITP10721 976 aa13.65□□□□□ -0.22
PRDM16-201ENST00000270722 GGCXP38435 758 aa13.65□□□□□ -0.22
PRDM16-201ENST00000270722 HALP42357 657 aa13.65□□□□□ -0.22
PRDM16-201ENST00000270722 CLK3P49761 638 aaKnown RBP13.65□□□□□ -0.22
PRDM16-201ENST00000270722 CES5AQ6NT32 575 aa13.65□□□□□ -0.22
PRDM16-201ENST00000270722 TMC2Q8TDI7 906 aa13.65□□□□□ -0.22
PRDM16-201ENST00000270722 MIEF1Q9NQG6 463 aa13.65□□□□□ -0.22
PRDM16-201ENST00000270722 TMED5Q9Y3A6 229 aa13.65□□□□□ -0.22
PRDM16-201ENST00000270722 TSPAN4O14817 238 aa13.65□□□□□ -0.22
PRDM16-201ENST00000270722 CRTAPO75718 401 aaPredicted RBP13.65□□□□□ -0.22
PRDM16-201ENST00000270722 MTMR2Q13614 643 aa13.65□□□□□ -0.22
PRDM16-201ENST00000270722 MYO1HQ8N1T3 1032 aa13.65□□□□□ -0.22
PRDM16-201ENST00000270722 OSBPL11Q9BXB4 747 aa13.65□□□□□ -0.22
PRDM16-201ENST00000270722 TASP1Q9H6P5 420 aa13.65□□□□□ -0.22
PRDM16-201ENST00000270722 AFF2P51816 1311 aa13.65□□□□□ -0.22
PRDM16-201ENST00000270722 KLHL41O60662 606 aa13.65□□□□□ -0.23
PRDM16-201ENST00000270722 TKTP29401 623 aaKnown RBP13.65□□□□□ -0.23
PRDM16-201ENST00000270722 STARP49675 285 aa13.65□□□□□ -0.23
PRDM16-201ENST00000270722 GMFBP60983 142 aa13.65□□□□□ -0.23
PRDM16-201ENST00000270722 QRICH1Q2TAL8 776 aa13.65□□□□□ -0.23
PRDM16-201ENST00000270722 PSMA8Q8TAA3 256 aa13.65□□□□□ -0.23
PRDM16-201ENST00000270722 SH3RF3Q8TEJ3 882 aaPredicted RBP13.65□□□□□ -0.23
PRDM16-201ENST00000270722 ATP6V1G3Q96LB4 118 aa13.65□□□□□ -0.23
PRDM16-201ENST00000270722 INTS2Q9H0H0 1204 aaKnown RBP13.65□□□□□ -0.23
PRDM16-201ENST00000270722 DCLRE1BQ9H816 532 aa13.65□□□□□ -0.23
PRDM16-201ENST00000270722 ABHD10Q9NUJ1 306 aa13.65□□□□□ -0.23
PRDM16-201ENST00000270722 RGS17Q9UGC6 210 aaPredicted RBP13.65□□□□□ -0.23
PRDM16-201ENST00000270722 PTGER2P43116 358 aa13.64□□□□□ -0.23
PRDM16-201ENST00000270722 CASP5P51878 434 aa13.64□□□□□ -0.23
PRDM16-201ENST00000270722 ZNF200P98182 395 aaPredicted RBP13.64□□□□□ -0.23
PRDM16-201ENST00000270722 BNIP1Q12981 228 aa13.64□□□□□ -0.23
PRDM16-201ENST00000270722 BYSLQ13895 437 aaKnown RBP13.64□□□□□ -0.23
PRDM16-201ENST00000270722 SPOCK3Q9BQ16 436 aa13.64□□□□□ -0.23
PRDM16-201ENST00000270722 SLITRK2Q9H156 845 aa13.64□□□□□ -0.23
PRDM16-201ENST00000270722 ANKEF1Q9NU02 776 aa13.64□□□□□ -0.23
PRDM16-201ENST00000270722 A0A087WZ62 844 aa13.64□□□□□ -0.23
PRDM16-201ENST00000270722 ALBP02768 609 aa13.64□□□□□ -0.23
PRDM16-201ENST00000270722 GANQ9H2C0 597 aa13.64□□□□□ -0.23
PRDM16-201ENST00000270722 FBXO44Q9H4M3 255 aa13.64□□□□□ -0.23
PRDM16-201ENST00000270722 EXOSC4Q9NPD3 245 aaKnown RBP13.64□□□□□ -0.23
PRDM16-201ENST00000270722 MINPP1Q9UNW1 487 aa13.64□□□□□ -0.23
PRDM16-201ENST00000270722 F8A1P23610 371 aa13.64□□□□□ -0.23
PRDM16-201ENST00000270722 NUP93Q8N1F7 819 aa13.64□□□□□ -0.23
PRDM16-201ENST00000270722 KLHL4Q9C0H6 718 aa13.64□□□□□ -0.23
PRDM16-201ENST00000270722 CYP19A1P11511 503 aaPredicted RBP13.64□□□□□ -0.23
PRDM16-201ENST00000270722 FCGR1AP12314 374 aa13.64□□□□□ -0.23
PRDM16-201ENST00000270722 GEMP55040 296 aa13.64□□□□□ -0.23
PRDM16-201ENST00000270722 ITGA1P56199 1179 aa13.64□□□□□ -0.23
PRDM16-201ENST00000270722 CENPCQ03188 943 aa13.64□□□□□ -0.23
PRDM16-201ENST00000270722 MAD2L1Q13257 205 aaPredicted RBP13.64□□□□□ -0.23
PRDM16-201ENST00000270722 ATF7IP2Q5U623 682 aa13.64□□□□□ -0.23
PRDM16-201ENST00000270722 RETSATQ6NUM9 610 aa13.64□□□□□ -0.23
PRDM16-201ENST00000270722 MZT2BQ6NZ67 158 aa13.64□□□□□ -0.23
PRDM16-201ENST00000270722 TRPM8Q7Z2W7 1104 aa13.64□□□□□ -0.23
PRDM16-201ENST00000270722 CSGALNACT1Q8TDX6 532 aa13.64□□□□□ -0.23
PRDM16-201ENST00000270722 CRELD1Q96HD1 420 aa13.64□□□□□ -0.23
PRDM16-201ENST00000270722 AP3M1Q9Y2T2 418 aa13.64□□□□□ -0.23
PRDM16-201ENST00000270722 STIP1P31948 543 aaKnown RBP13.64□□□□□ -0.23
PRDM16-201ENST00000270722 CYB5D1Q6P9G0 228 aa13.64□□□□□ -0.23
PRDM16-201ENST00000270722 USP17L6PQ6QN14 398 aa13.64□□□□□ -0.23
PRDM16-201ENST00000270722 C7orf25Q9BPX7 421 aa13.64□□□□□ -0.23
PRDM16-201ENST00000270722 ACAT2Q9BWD1 397 aa13.64□□□□□ -0.23
PRDM16-201ENST00000270722 PIH1D3Q9NQM4 214 aaKnown RBP13.64□□□□□ -0.23
PRDM16-201ENST00000270722 PPP2R3BQ9Y5P8 575 aa13.64□□□□□ -0.23
PRDM16-201ENST00000270722 ZBTB7AO95365 584 aa13.64□□□□□ -0.23
PRDM16-201ENST00000270722 LLGL1Q15334 1064 aa13.64□□□□□ -0.23
PRDM16-201ENST00000270722 ESRP1Q6NXG1 681 aaKnown RBP13.64□□□□□ -0.23
PRDM16-201ENST00000270722 KLHL24Q6TFL4 600 aa13.64□□□□□ -0.23
PRDM16-201ENST00000270722 POP5Q969H6 163 aaKnown RBP13.64□□□□□ -0.23
PRDM16-201ENST00000270722 MKNK1Q9BUB5 465 aa13.64□□□□□ -0.23
PRDM16-201ENST00000270722 DCTN4Q9UJW0 460 aa13.64□□□□□ -0.23
PRDM16-201ENST00000270722 PIK3R1P27986 724 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 CYFIP1Q7L576 1253 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 LPCAT2Q7L5N7 544 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms