RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 SMYD3Q9H7B4 428 aa28.54■■■□□ 2.16
CBX4-201ENST00000269397 SIRPGQ9P1W8 387 aa28.54■■■□□ 2.16
CBX4-201ENST00000269397 F8W8V4 182 aa28.54■■■□□ 2.16
CBX4-201ENST00000269397 TOM1L1O75674 476 aa28.54■■■□□ 2.16
CBX4-201ENST00000269397 EGFRP00533 1210 aa28.54■■■□□ 2.16
CBX4-201ENST00000269397 SLC25A3Q00325 362 aa28.54■■■□□ 2.16
CBX4-201ENST00000269397 C6orf163Q5TEZ5 329 aa28.54■■■□□ 2.16
CBX4-201ENST00000269397 POU5F2Q8N7G0 328 aa28.54■■■□□ 2.16
CBX4-201ENST00000269397 UBA3Q8TBC4 463 aa28.54■■■□□ 2.16
CBX4-201ENST00000269397 PIWIL1Q96J94 861 aaKnown RBP28.54■■■□□ 2.16
CBX4-201ENST00000269397 ECSITQ9BQ95 431 aa28.54■■■□□ 2.16
CBX4-201ENST00000269397 QTRT2Q9H974 415 aaKnown RBP28.54■■■□□ 2.16
CBX4-201ENST00000269397 HBS1LQ9Y450 684 aaKnown RBP28.54■■■□□ 2.16
CBX4-201ENST00000269397 CHADO15335 359 aa28.53■■■□□ 2.16
CBX4-201ENST00000269397 TRMT5Q32P41 509 aaKnown RBP28.53■■■□□ 2.16
CBX4-201ENST00000269397 CDHR1Q96JP9 859 aa28.53■■■□□ 2.16
CBX4-201ENST00000269397 ADPGKQ9BRR6 497 aa28.53■■■□□ 2.16
CBX4-201ENST00000269397 APOL6Q9BWW8 343 aa28.53■■■□□ 2.16
CBX4-201ENST00000269397 SHCBP1LQ9BZQ2 653 aa28.53■■■□□ 2.16
CBX4-201ENST00000269397 SDCBP2Q9H190 292 aa28.53■■■□□ 2.16
CBX4-201ENST00000269397 TMEM134Q9H6X4 195 aa28.53■■■□□ 2.16
CBX4-201ENST00000269397 PPME1Q9Y570 386 aa28.53■■■□□ 2.16
CBX4-201ENST00000269397 SPAG6O75602 509 aa28.53■■■□□ 2.16
CBX4-201ENST00000269397 LYPLA1O75608 230 aaPredicted RBP28.53■■■□□ 2.16
CBX4-201ENST00000269397 HOXC6P09630 235 aa28.53■■■□□ 2.16
CBX4-201ENST00000269397 C6orf222P0C671 652 aaPredicted RBP28.53■■■□□ 2.16
CBX4-201ENST00000269397 OSBPP22059 807 aa28.53■■■□□ 2.16
CBX4-201ENST00000269397 AP2B1P63010 937 aa28.53■■■□□ 2.16
CBX4-201ENST00000269397 SMAD1Q15797 465 aaKnown RBP28.53■■■□□ 2.16
CBX4-201ENST00000269397 RAPH1Q70E73 1250 aa28.53■■■□□ 2.16
CBX4-201ENST00000269397 MPP5Q8N3R9 675 aa28.53■■■□□ 2.16
CBX4-201ENST00000269397 PYDC1Q8WXC3 89 aa28.53■■■□□ 2.16
CBX4-201ENST00000269397 SORBS2O94875 1100 aaKnown RBP28.52■■■□□ 2.16
CBX4-201ENST00000269397 AP3M2P53677 418 aa28.52■■■□□ 2.16
CBX4-201ENST00000269397 TRNP1Q6NT89 227 aa28.52■■■□□ 2.16
CBX4-201ENST00000269397 HMX2A2RU54 273 aa28.52■■■□□ 2.16
CBX4-201ENST00000269397 ARHGAP42A6NI28 874 aa28.52■■■□□ 2.16
CBX4-201ENST00000269397 LGR5O75473 907 aa28.52■■■□□ 2.16
CBX4-201ENST00000269397 CDC16Q13042 620 aa28.52■■■□□ 2.16
CBX4-201ENST00000269397 TMEM132BQ14DG7 1078 aa28.52■■■□□ 2.16
CBX4-201ENST00000269397 SCYL2Q6P3W7 929 aa28.52■■■□□ 2.16
CBX4-201ENST00000269397 UNC5AQ6ZN44 842 aa28.52■■■□□ 2.16
CBX4-201ENST00000269397 TRAPPC9Q96Q05 1148 aa28.52■■■□□ 2.16
CBX4-201ENST00000269397 LHX5Q9H2C1 402 aa28.52■■■□□ 2.16
CBX4-201ENST00000269397 ZNF214Q9UL59 606 aaPredicted RBP28.52■■■□□ 2.16
CBX4-201ENST00000269397 A0A1B0GVG6 124 aa28.51■■■□□ 2.15
CBX4-201ENST00000269397 M0QYV0 167 aa28.51■■■□□ 2.15
CBX4-201ENST00000269397 C16orf46Q6P387 395 aa28.51■■■□□ 2.15
CBX4-201ENST00000269397 CYP4V2Q6ZWL3 525 aaPredicted RBP28.51■■■□□ 2.15
CBX4-201ENST00000269397 MRPL4Q9BYD3 311 aaKnown RBP28.51■■■□□ 2.15
CBX4-201ENST00000269397 PNPLA8Q9NP80 782 aa28.51■■■□□ 2.15
CBX4-201ENST00000269397 FER1L6Q2WGJ9 1857 aa28.51■■■□□ 2.15
CBX4-201ENST00000269397 OGTO15294 1046 aa28.51■■■□□ 2.15
CBX4-201ENST00000269397 HMGCRP04035 888 aa28.51■■■□□ 2.15
CBX4-201ENST00000269397 TMEM192Q8IY95 271 aa28.51■■■□□ 2.15
CBX4-201ENST00000269397 USP6NLQ92738 828 aa28.51■■■□□ 2.15
CBX4-201ENST00000269397 TEPSINQ96N21 525 aa28.51■■■□□ 2.15
CBX4-201ENST00000269397 ACO2Q99798 780 aaKnown RBP28.51■■■□□ 2.15
CBX4-201ENST00000269397 SLC17A6Q9P2U8 582 aa28.51■■■□□ 2.15
CBX4-201ENST00000269397 CPSF3Q9UKF6 684 aaKnown RBP28.51■■■□□ 2.15
CBX4-201ENST00000269397 F5H423 210 aaPredicted RBP28.5■■■□□ 2.15
CBX4-201ENST00000269397 MICAL2O94851 1124 aa28.5■■■□□ 2.15
CBX4-201ENST00000269397 PDE1BQ01064 536 aa28.5■■■□□ 2.15
CBX4-201ENST00000269397 TRIM42Q8IWZ5 723 aa28.5■■■□□ 2.15
CBX4-201ENST00000269397 LRRC71Q8N4P6 559 aa28.5■■■□□ 2.15
CBX4-201ENST00000269397 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP28.5■■■□□ 2.15
CBX4-201ENST00000269397 SLC15A5A6NIM6 579 aa28.5■■■□□ 2.15
CBX4-201ENST00000269397 MED7O43513 233 aa28.5■■■□□ 2.15
CBX4-201ENST00000269397 APBA3O96018 575 aa28.5■■■□□ 2.15
CBX4-201ENST00000269397 STX3Q13277 289 aa28.5■■■□□ 2.15
CBX4-201ENST00000269397 KRT81Q14533 505 aa28.5■■■□□ 2.15
CBX4-201ENST00000269397 RALGPS1Q5JS13 557 aa28.5■■■□□ 2.15
CBX4-201ENST00000269397 LGSNQ5TDP6 509 aa28.5■■■□□ 2.15
CBX4-201ENST00000269397 ZPBP2Q6X784 338 aa28.5■■■□□ 2.15
CBX4-201ENST00000269397 UNC5BQ8IZJ1 945 aa28.5■■■□□ 2.15
CBX4-201ENST00000269397 PLD5Q8N7P1 536 aa28.5■■■□□ 2.15
CBX4-201ENST00000269397 RNF149Q8NC42 400 aa28.5■■■□□ 2.15
CBX4-201ENST00000269397 REPS2Q8NFH8 660 aa28.5■■■□□ 2.15
CBX4-201ENST00000269397 PPP1R14CQ8TAE6 165 aa28.5■■■□□ 2.15
CBX4-201ENST00000269397 PCYT2Q99447 389 aa28.5■■■□□ 2.15
CBX4-201ENST00000269397 EBF3Q9H4W6 596 aa28.5■■■□□ 2.15
CBX4-201ENST00000269397 ASNSD1Q9NWL6 643 aa28.5■■■□□ 2.15
CBX4-201ENST00000269397 DDX43Q9NXZ2 648 aaKnown RBP28.5■■■□□ 2.15
CBX4-201ENST00000269397 PAK5Q9P286 719 aa28.5■■■□□ 2.15
CBX4-201ENST00000269397 COL11A1P12107 1806 aaPredicted RBP28.5■■■□□ 2.15
CBX4-201ENST00000269397 ITM2AO43736 263 aa28.49■■■□□ 2.15
CBX4-201ENST00000269397 PEX10O60683 326 aa28.49■■■□□ 2.15
CBX4-201ENST00000269397 APOEP02649 317 aa28.49■■■□□ 2.15
CBX4-201ENST00000269397 BPGMP07738 259 aa28.49■■■□□ 2.15
CBX4-201ENST00000269397 CNTN2Q02246 1040 aa28.49■■■□□ 2.15
CBX4-201ENST00000269397 DNAL1Q4LDG9 190 aa28.49■■■□□ 2.15
CBX4-201ENST00000269397 SLC4A11Q8NBS3 891 aa28.49■■■□□ 2.15
CBX4-201ENST00000269397 ETAA1Q9NY74 926 aa28.49■■■□□ 2.15
CBX4-201ENST00000269397 PDP2Q9P2J9 529 aa28.49■■■□□ 2.15
CBX4-201ENST00000269397 A0A088AWK7 358 aa28.49■■■□□ 2.15
CBX4-201ENST00000269397 RNASEH1O60930 286 aaKnown RBP28.49■■■□□ 2.15
CBX4-201ENST00000269397 ZBED1O96006 694 aa28.49■■■□□ 2.15
CBX4-201ENST00000269397 PRKCHP24723 683 aa28.49■■■□□ 2.15
CBX4-201ENST00000269397 GRIA1P42261 906 aa28.49■■■□□ 2.15
CBX4-201ENST00000269397 HMGCS2P54868 508 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms