RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 OTUD1Q5VV17 481 aaPredicted RBP14.72□□□□□ -0.05
SS18-201ENST00000269137 SYPL2Q5VXT5 272 aa14.72□□□□□ -0.05
SS18-201ENST00000269137 SCYL2Q6P3W7 929 aa14.72□□□□□ -0.05
SS18-201ENST00000269137 PRSS55Q6UWB4 352 aaPredicted RBP14.72□□□□□ -0.05
SS18-201ENST00000269137 SCN4BQ8IWT1 228 aa14.72□□□□□ -0.05
SS18-201ENST00000269137 FBXO22Q8NEZ5 403 aa14.72□□□□□ -0.05
SS18-201ENST00000269137 SCAMP5Q8TAC9 235 aa14.72□□□□□ -0.05
SS18-201ENST00000269137 FAM71BQ8TC56 605 aa14.72□□□□□ -0.05
SS18-201ENST00000269137 HNRNPLLQ8WVV9 542 aaKnown RBP14.72□□□□□ -0.05
SS18-201ENST00000269137 RIN2Q8WYP3 895 aaPredicted RBP14.72□□□□□ -0.05
SS18-201ENST00000269137 PGAP3Q96FM1 320 aaPredicted RBP14.72□□□□□ -0.05
SS18-201ENST00000269137 HERC2P3Q9BVR0 1158 aa14.72□□□□□ -0.05
SS18-201ENST00000269137 IL37Q9NZH6 218 aa14.72□□□□□ -0.05
SS18-201ENST00000269137 FAM187AA6NFU0 413 aa14.71□□□□□ -0.05
SS18-201ENST00000269137 ZBBXA8MT70 800 aa14.71□□□□□ -0.05
SS18-201ENST00000269137 ZNF487B1APH4 448 aa14.71□□□□□ -0.05
SS18-201ENST00000269137 BHMG1C9JSJ3 638 aaPredicted RBP14.71□□□□□ -0.05
SS18-201ENST00000269137 CAPN9O14815 690 aa14.71□□□□□ -0.05
SS18-201ENST00000269137 HEXIM1O94992 359 aaKnown RBP14.71□□□□□ -0.05
SS18-201ENST00000269137 VNN2O95498 520 aa14.71□□□□□ -0.05
SS18-201ENST00000269137 KRT10P13645 584 aa14.71□□□□□ -0.05
SS18-201ENST00000269137 TNFRSF8P28908 595 aa14.71□□□□□ -0.05
SS18-201ENST00000269137 PPM1AP35813 382 aa14.71□□□□□ -0.05
SS18-201ENST00000269137 COILP38432 576 aaPredicted RBP14.71□□□□□ -0.05
SS18-201ENST00000269137 CLCN6P51797 869 aa14.71□□□□□ -0.05
SS18-201ENST00000269137 EPHB4P54760 987 aa14.71□□□□□ -0.05
SS18-201ENST00000269137 DSG1Q02413 1049 aa14.71□□□□□ -0.05
SS18-201ENST00000269137 CCNG2Q16589 344 aa14.71□□□□□ -0.05
SS18-201ENST00000269137 ERMARDQ5T6L9 678 aa14.71□□□□□ -0.05
SS18-201ENST00000269137 BSPRYQ5W0U4 402 aa14.71□□□□□ -0.05
SS18-201ENST00000269137 KIAA1841Q6NSI8 718 aa14.71□□□□□ -0.05
SS18-201ENST00000269137 CCNI2Q6ZMN8 369 aaPredicted RBP14.71□□□□□ -0.05
SS18-201ENST00000269137 RNF19BQ6ZMZ0 732 aa14.71□□□□□ -0.05
SS18-201ENST00000269137 DDX53Q86TM3 631 aaKnown RBP14.71□□□□□ -0.05
SS18-201ENST00000269137 PSTKQ8IV42 348 aaKnown RBP14.71□□□□□ -0.05
SS18-201ENST00000269137 MAP7D3Q8IWC1 876 aa14.71□□□□□ -0.05
SS18-201ENST00000269137 IFT20Q8IY31 132 aa14.71□□□□□ -0.05
SS18-201ENST00000269137 GPR65Q8IYL9 337 aa14.71□□□□□ -0.05
SS18-201ENST00000269137 NUP93Q8N1F7 819 aa14.71□□□□□ -0.05
SS18-201ENST00000269137 HSPH1Q92598 858 aa14.71□□□□□ -0.05
SS18-201ENST00000269137 SLCO2A1Q92959 643 aa14.71□□□□□ -0.05
SS18-201ENST00000269137 PGLYRP2Q96PD5 576 aa14.71□□□□□ -0.05
SS18-201ENST00000269137 DCLK3Q9C098 648 aa14.71□□□□□ -0.05
SS18-201ENST00000269137 GDF3Q9NR23 364 aa14.71□□□□□ -0.05
SS18-201ENST00000269137 AAASQ9NRG9 546 aa14.71□□□□□ -0.05
SS18-201ENST00000269137 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.71□□□□□ -0.05
SS18-201ENST00000269137 PCDH10Q9P2E7 1040 aa14.71□□□□□ -0.05
SS18-201ENST00000269137 STK39Q9UEW8 545 aa14.71□□□□□ -0.05
SS18-201ENST00000269137 NAALADL1Q9UQQ1 740 aa14.71□□□□□ -0.05
SS18-201ENST00000269137 CDY1Q9Y6F8 540 aa14.71□□□□□ -0.05
SS18-201ENST00000269137 HAPLN1P10915 354 aaPredicted RBP14.71□□□□□ -0.06
SS18-201ENST00000269137 RDXP35241 583 aaKnown RBP14.71□□□□□ -0.06
SS18-201ENST00000269137 ARPP19P56211 112 aa14.71□□□□□ -0.06
SS18-201ENST00000269137 DR1Q01658 176 aa14.71□□□□□ -0.06
SS18-201ENST00000269137 ADCY2Q08462 1091 aa14.71□□□□□ -0.06
SS18-201ENST00000269137 DDR2Q16832 855 aa14.71□□□□□ -0.06
SS18-201ENST00000269137 TTC27Q6P3X3 843 aa14.71□□□□□ -0.06
SS18-201ENST00000269137 CCDC137Q6PK04 289 aaKnown RBP14.71□□□□□ -0.06
SS18-201ENST00000269137 BBS12Q6ZW61 710 aa14.71□□□□□ -0.06
SS18-201ENST00000269137 C7orf61Q8IZ16 206 aa14.71□□□□□ -0.06
SS18-201ENST00000269137 HERVK_113Q902F9 699 aa14.71□□□□□ -0.06
SS18-201ENST00000269137 SPATA17Q96L03 361 aa14.71□□□□□ -0.06
SS18-201ENST00000269137 CEP295NLQ96MC4 621 aa14.71□□□□□ -0.06
SS18-201ENST00000269137 SLC9A7Q96T83 725 aa14.71□□□□□ -0.06
SS18-201ENST00000269137 SNRNP25Q9BV90 132 aaKnown RBP14.71□□□□□ -0.06
SS18-201ENST00000269137 FBXO44Q9H4M3 255 aa14.71□□□□□ -0.06
SS18-201ENST00000269137 CALCOCO1Q9P1Z2 691 aa14.71□□□□□ -0.06
SS18-201ENST00000269137 SCML2Q9UQR0 700 aa14.71□□□□□ -0.06
SS18-201ENST00000269137 FAM92AA1XBS5 289 aa14.7□□□□□ -0.06
SS18-201ENST00000269137 M0QYT0 321 aa14.7□□□□□ -0.06
SS18-201ENST00000269137 TTI1O43156 1089 aa14.7□□□□□ -0.06
SS18-201ENST00000269137 ERLIN1O75477 346 aa14.7□□□□□ -0.06
SS18-201ENST00000269137 ZMYND10O75800 440 aa14.7□□□□□ -0.06
SS18-201ENST00000269137 F9P00740 461 aa14.7□□□□□ -0.06
SS18-201ENST00000269137 CD48P09326 243 aa14.7□□□□□ -0.06
SS18-201ENST00000269137 NCAM1P13591 858 aa14.7□□□□□ -0.06
SS18-201ENST00000269137 PTGIRP43119 386 aa14.7□□□□□ -0.06
SS18-201ENST00000269137 GLUD2P49448 558 aa14.7□□□□□ -0.06
SS18-201ENST00000269137 CDH6P55285 790 aa14.7□□□□□ -0.06
SS18-201ENST00000269137 PITX1P78337 314 aaPredicted RBP14.7□□□□□ -0.06
SS18-201ENST00000269137 ROR1Q01973 937 aa14.7□□□□□ -0.06
SS18-201ENST00000269137 DPYSL2Q16555 572 aa14.7□□□□□ -0.06
SS18-201ENST00000269137 DRICH1Q6PGQ1 229 aaPredicted RBP14.7□□□□□ -0.06
SS18-201ENST00000269137 C1orf54Q8WWF1 131 aa14.7□□□□□ -0.06
SS18-201ENST00000269137 SEC14L1Q92503 715 aa14.7□□□□□ -0.06
SS18-201ENST00000269137 CLSTN3Q9BQT9 956 aa14.7□□□□□ -0.06
SS18-201ENST00000269137 FRMD8P1Q9BZ68 369 aaPredicted RBP14.7□□□□□ -0.06
SS18-201ENST00000269137 COMMD8Q9NX08 183 aa14.7□□□□□ -0.06
SS18-201ENST00000269137 CXXC1Q9P0U4 656 aaPredicted RBP14.7□□□□□ -0.06
SS18-201ENST00000269137 HSFX1Q9UBD0 423 aa14.7□□□□□ -0.06
SS18-201ENST00000269137 FEZ2Q9UHY8 353 aaPredicted RBP14.7□□□□□ -0.06
SS18-201ENST00000269137 R3HDM2Q9Y2K5 976 aaKnown RBP14.7□□□□□ -0.06
SS18-201ENST00000269137 INSL6Q9Y581 213 aa14.7□□□□□ -0.06
SS18-201ENST00000269137 PCDHB12Q9Y5F1 795 aa14.7□□□□□ -0.06
SS18-201ENST00000269137 WDR27A2RRH5 827 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 ADAM12O43184 909 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 OR1D2P34982 312 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 ATXN1P54253 815 aaKnown RBP14.69□□□□□ -0.06
SS18-201ENST00000269137 AIF1P55008 147 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 YWHAGP61981 247 aaKnown RBP eCLIP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms