RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 FNIP1Q8TF40 1166 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 ADGRE3Q9BY15 652 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 VPS4BO75351 444 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 ERVK-10P10266 1014 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 SLC29A2Q14542 456 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 SNRNP35Q16560 246 aaKnown RBP12.45□□□□□ -0.42
SRRM4-201ENST00000267260 MROH9Q5TGP6 573 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 ARL10Q8N8L6 244 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 ZNF512Q96ME7 567 aaPredicted RBP12.45□□□□□ -0.42
SRRM4-201ENST00000267260 ZIM3Q96PE6 472 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 CCSER1Q9C0I3 900 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 MTIF3Q9H2K0 278 aaKnown RBP12.45□□□□□ -0.42
SRRM4-201ENST00000267260 EHD3Q9NZN3 535 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 NCKIPSDQ9NZQ3 722 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 RHAGQ02094 409 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 CIAPIN1Q6FI81 312 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 JAMLQ86YT9 394 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 NEK6Q9HC98 313 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 VTI1BQ9UEU0 232 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 PHF11Q9UIL8 331 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 PREX2Q70Z35 1606 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 HEG1Q9ULI3 1381 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 USP27XA6NNY8 438 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 SASH1O94885 1247 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 SSTR3P32745 418 aaPredicted RBP12.45□□□□□ -0.42
SRRM4-201ENST00000267260 NEDD8Q15843 81 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 ATP13A5Q4VNC0 1218 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 TTC27Q6P3X3 843 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 COMMD2Q86X83 199 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 EFHD2Q96C19 240 aaPredicted RBP12.45□□□□□ -0.42
SRRM4-201ENST00000267260 C8orf4Q9NR00 106 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 DYRK1BQ9Y463 629 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 CHD4Q14839 1912 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 SAMD9LQ8IVG5 1584 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 RAD17O75943 681 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 GALCP54803 685 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 MTTPP55157 894 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 HSF2Q03933 536 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 DDI2Q5TDH0 399 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 USPL1Q5W0Q7 1092 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 ABRAXAS1Q6UWZ7 409 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 C1orf131Q8NDD1 294 aaKnown RBP12.45□□□□□ -0.42
SRRM4-201ENST00000267260 PPP1R10Q96QC0 940 aaKnown RBP12.45□□□□□ -0.42
SRRM4-201ENST00000267260 CCDC28BQ9BUN5 200 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 C9orf16Q9BUW7 83 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 PIN4Q9Y237 131 aaKnown RBP12.45□□□□□ -0.42
SRRM4-201ENST00000267260 MYH7BA7E2Y1 1941 aa12.45□□□□□ -0.42
SRRM4-201ENST00000267260 UQCRBP14927 111 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 TUBA4AP68366 448 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 GNA13Q14344 377 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 WASHC2DQ5SRD0 308 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 LRRC74BQ6ZQY2 392 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 UTP15Q8TED0 518 aaKnown RBP12.44□□□□□ -0.42
SRRM4-201ENST00000267260 STRBPQ96SI9 672 aaKnown RBP12.44□□□□□ -0.42
SRRM4-201ENST00000267260 CDK5RAP1Q96SZ6 601 aaKnown RBP12.44□□□□□ -0.42
SRRM4-201ENST00000267260 RSL24D1Q9UHA3 163 aaKnown RBP12.44□□□□□ -0.42
SRRM4-201ENST00000267260 RUVBL2Q9Y230 463 aaKnown RBP12.44□□□□□ -0.42
SRRM4-201ENST00000267260 MAP3K4Q9Y6R4 1608 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 RBP1P09455 135 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 PNPLA4P41247 253 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 RAB25P57735 213 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 SRP54P61011 504 aaKnown RBP12.44□□□□□ -0.42
SRRM4-201ENST00000267260 ARHGEF19Q8IW93 802 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 LRRC17Q8N6Y2 441 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 TDRD5Q8NAT2 981 aaKnown RBP12.44□□□□□ -0.42
SRRM4-201ENST00000267260 WDR41Q9HAD4 459 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 SDR42E2A6NKP2 422 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 PRKCBP05771 671 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 RASA2Q15283 850 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 KCTD21Q4G0X4 260 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 FAM196AQ6ZSG2 479 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 ATP6V0D2Q8N8Y2 350 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 ZNF671Q8TAW3 534 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 FEZF2Q8TBJ5 459 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 AP3S1Q92572 193 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 DCUN1D5Q9BTE7 237 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 UCHL3P15374 230 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 ARF4P18085 180 aaPredicted RBP12.44□□□□□ -0.42
SRRM4-201ENST00000267260 GARTP22102 1010 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 PTPN4P29074 926 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 LRPAP1P30533 357 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 NR1I3Q14994 352 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 QPRTQ15274 297 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 CLVS1Q8IUQ0 354 aaPredicted RBP12.44□□□□□ -0.42
SRRM4-201ENST00000267260 KCTD10Q9H3F6 313 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 TMEM138Q9NPI0 162 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 EMC3Q9P0I2 261 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 RAD51CO43502 376 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 LBPP18428 481 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 TCAIMQ8N3R3 496 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.44□□□□□ -0.42
SRRM4-201ENST00000267260 PRR29P0C7W0 189 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 STK4Q13043 487 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 NFYCQ13952 458 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 SMCO1Q147U7 214 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 USP38Q8NB14 1042 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 TMEM237Q96Q45 408 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 PUS3Q9BZE2 481 aaKnown RBP12.44□□□□□ -0.42
SRRM4-201ENST00000267260 RACGAP1Q9H0H5 632 aa12.44□□□□□ -0.42
SRRM4-201ENST00000267260 NRKQ7Z2Y5 1582 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms