RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 TMEM63AO94886 807 aa17.58■□□□□ 0.4
CHKA-201ENST00000265689 DESP17661 470 aa17.58■□□□□ 0.4
CHKA-201ENST00000265689 PTPN1P18031 435 aaKnown RBP17.58■□□□□ 0.4
CHKA-201ENST00000265689 ACADSBP45954 432 aa17.58■□□□□ 0.4
CHKA-201ENST00000265689 KIAA0319Q5VV43 1072 aa17.58■□□□□ 0.4
CHKA-201ENST00000265689 PAQR9Q6ZVX9 377 aa17.58■□□□□ 0.4
CHKA-201ENST00000265689 RSPH3Q86UC2 560 aa17.58■□□□□ 0.4
CHKA-201ENST00000265689 CENPIQ92674 756 aaPredicted RBP17.58■□□□□ 0.4
CHKA-201ENST00000265689 HSFY1Q96LI6 401 aa17.58■□□□□ 0.4
CHKA-201ENST00000265689 TTC25Q96NG3 672 aa17.58■□□□□ 0.4
CHKA-201ENST00000265689 HNRNPABQ99729 332 aaKnown RBP17.58■□□□□ 0.4
CHKA-201ENST00000265689 UPF3AQ9H1J1 476 aaKnown RBP17.58■□□□□ 0.4
CHKA-201ENST00000265689 AGO3Q9H9G7 860 aaKnown RBP17.58■□□□□ 0.4
CHKA-201ENST00000265689 EXOC1LA0A1B0GW35 172 aa17.57■□□□□ 0.4
CHKA-201ENST00000265689 NDC80O14777 642 aa17.57■□□□□ 0.4
CHKA-201ENST00000265689 XPO1O14980 1071 aaKnown RBP17.57■□□□□ 0.4
CHKA-201ENST00000265689 MDM4O15151 490 aa17.57■□□□□ 0.4
CHKA-201ENST00000265689 GCAP28676 217 aa17.57■□□□□ 0.4
CHKA-201ENST00000265689 ATP5DP30049 168 aa17.57■□□□□ 0.4
CHKA-201ENST00000265689 IFNAR2P48551 515 aa17.57■□□□□ 0.4
CHKA-201ENST00000265689 BCAR1P56945 870 aa17.57■□□□□ 0.4
CHKA-201ENST00000265689 BASP1P80723 227 aaKnown RBP17.57■□□□□ 0.4
CHKA-201ENST00000265689 ADIGQ0VDE8 80 aa17.57■□□□□ 0.4
CHKA-201ENST00000265689 SYCP2LQ5T4T6 812 aa17.57■□□□□ 0.4
CHKA-201ENST00000265689 SERINC5Q86VE9 423 aa17.57■□□□□ 0.4
CHKA-201ENST00000265689 MGARPQ8TDB4 240 aa17.57■□□□□ 0.4
CHKA-201ENST00000265689 SENP8Q96LD8 212 aa17.57■□□□□ 0.4
CHKA-201ENST00000265689 DHX35Q9H5Z1 703 aaKnown RBP17.57■□□□□ 0.4
CHKA-201ENST00000265689 SPC25Q9HBM1 224 aa17.57■□□□□ 0.4
CHKA-201ENST00000265689 TMEM120BA0PK00 339 aa17.57■□□□□ 0.4
CHKA-201ENST00000265689 DRD4P21917 467 aa17.57■□□□□ 0.4
CHKA-201ENST00000265689 LRRC14Q15048 493 aa17.57■□□□□ 0.4
CHKA-201ENST00000265689 MDH1BQ5I0G3 518 aa17.57■□□□□ 0.4
CHKA-201ENST00000265689 CHMP6Q96FZ7 201 aa17.57■□□□□ 0.4
CHKA-201ENST00000265689 DUSP16Q9BY84 665 aa17.57■□□□□ 0.4
CHKA-201ENST00000265689 USP29Q9HBJ7 922 aa17.57■□□□□ 0.4
CHKA-201ENST00000265689 KCNK9Q9NPC2 374 aa17.57■□□□□ 0.4
CHKA-201ENST00000265689 CYLDQ9NQC7 956 aa17.57■□□□□ 0.4
CHKA-201ENST00000265689 EURLQ9NYK6 297 aa17.57■□□□□ 0.4
CHKA-201ENST00000265689 XPO7Q9UIA9 1087 aaKnown RBP17.57■□□□□ 0.4
CHKA-201ENST00000265689 TIMM13Q9Y5L4 95 aaPredicted RBP17.57■□□□□ 0.4
CHKA-201ENST00000265689 POC1B-GALNT4F8VUJ3 575 aa17.56■□□□□ 0.4
CHKA-201ENST00000265689 GABRDO14764 452 aa17.56■□□□□ 0.4
CHKA-201ENST00000265689 STIP1P31948 543 aaKnown RBP17.56■□□□□ 0.4
CHKA-201ENST00000265689 L1CAMP32004 1257 aa17.56■□□□□ 0.4
CHKA-201ENST00000265689 SCNN1AP37088 669 aa17.56■□□□□ 0.4
CHKA-201ENST00000265689 CLCNKBP51801 687 aa17.56■□□□□ 0.4
CHKA-201ENST00000265689 RABGGTBP53611 331 aa17.56■□□□□ 0.4
CHKA-201ENST00000265689 ARL4CP56559 192 aa17.56■□□□□ 0.4
CHKA-201ENST00000265689 GPX6P59796 221 aa17.56■□□□□ 0.4
CHKA-201ENST00000265689 TMED2Q15363 201 aa17.56■□□□□ 0.4
CHKA-201ENST00000265689 SLC9A4Q6AI14 798 aa17.56■□□□□ 0.4
CHKA-201ENST00000265689 CCDC185Q8N715 623 aa17.56■□□□□ 0.4
CHKA-201ENST00000265689 FAM149B1Q96BN6 582 aa17.56■□□□□ 0.4
CHKA-201ENST00000265689 ZNF317Q96PQ6 595 aaPredicted RBP17.56■□□□□ 0.4
CHKA-201ENST00000265689 WDR83Q9BRX9 315 aaKnown RBP17.56■□□□□ 0.4
CHKA-201ENST00000265689 DNAI2Q9GZS0 605 aa17.56■□□□□ 0.4
CHKA-201ENST00000265689 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.56■□□□□ 0.49e-6■■■■□ 24.8
CHKA-201ENST00000265689 DDX20Q9UHI6 824 aaKnown RBP17.56■□□□□ 0.4
CHKA-201ENST00000265689 INHAP05111 366 aa17.56■□□□□ 0.4
CHKA-201ENST00000265689 THP07101 528 aa17.56■□□□□ 0.4
CHKA-201ENST00000265689 CYP2F1P24903 491 aa17.56■□□□□ 0.4
CHKA-201ENST00000265689 NDUFV1P49821 464 aa17.56■□□□□ 0.4
CHKA-201ENST00000265689 ADCY1Q08828 1119 aa17.56■□□□□ 0.4
CHKA-201ENST00000265689 MGAT3Q09327 533 aa17.56■□□□□ 0.4
CHKA-201ENST00000265689 MPP2Q14168 576 aa17.56■□□□□ 0.4
CHKA-201ENST00000265689 SRRM1Q8IYB3 904 aaKnown RBP17.56■□□□□ 0.4
CHKA-201ENST00000265689 C3orf58Q8NDZ4 430 aa17.56■□□□□ 0.4
CHKA-201ENST00000265689 MRRFQ96E11 262 aaKnown RBP17.56■□□□□ 0.4
CHKA-201ENST00000265689 ZNF670Q9BS34 389 aa17.56■□□□□ 0.4
CHKA-201ENST00000265689 MED10Q9BTT4 135 aa17.56■□□□□ 0.4
CHKA-201ENST00000265689 RASSF4Q9H2L5 321 aa17.56■□□□□ 0.4
CHKA-201ENST00000265689 DDX43Q9NXZ2 648 aaKnown RBP17.56■□□□□ 0.4
CHKA-201ENST00000265689 PTCH2Q9Y6C5 1203 aa17.56■□□□□ 0.4
CHKA-201ENST00000265689 ARL5CA6NH57 179 aa17.55■□□□□ 0.4
CHKA-201ENST00000265689 KCNN4O15554 427 aa17.55■□□□□ 0.4
CHKA-201ENST00000265689 BRAFP15056 766 aa17.55■□□□□ 0.4
CHKA-201ENST00000265689 TGM2P21980 687 aa17.55■□□□□ 0.4
CHKA-201ENST00000265689 RBL1P28749 1068 aa17.55■□□□□ 0.4
CHKA-201ENST00000265689 THPOP40225 353 aa17.55■□□□□ 0.4
CHKA-201ENST00000265689 SCNN1GP51170 649 aa17.55■□□□□ 0.4
CHKA-201ENST00000265689 AGMOQ6ZNB7 445 aa17.55■□□□□ 0.4
CHKA-201ENST00000265689 ARCQ7LC44 396 aa17.55■□□□□ 0.4
CHKA-201ENST00000265689 CPLX4Q7Z7G2 160 aa17.55■□□□□ 0.4
CHKA-201ENST00000265689 DEFB106AQ8N104 65 aa17.55■□□□□ 0.4
CHKA-201ENST00000265689 ANKRD42Q8N9B4 389 aa17.55■□□□□ 0.4
CHKA-201ENST00000265689 FAF2Q96CS3 445 aa17.55■□□□□ 0.4
CHKA-201ENST00000265689 NCAPGQ9BPX3 1015 aa17.55■□□□□ 0.4
CHKA-201ENST00000265689 NRDE2Q9H7Z3 1164 aa17.55■□□□□ 0.4
CHKA-201ENST00000265689 MLXIPLQ9NP71 852 aa17.55■□□□□ 0.4
CHKA-201ENST00000265689 UBN1Q9NPG3 1134 aa17.55■□□□□ 0.4
CHKA-201ENST00000265689 CRTAC1Q9NQ79 661 aa17.55■□□□□ 0.4
CHKA-201ENST00000265689 SLC38A7Q9NVC3 462 aa17.55■□□□□ 0.4
CHKA-201ENST00000265689 MTMR10Q9NXD2 777 aa17.55■□□□□ 0.4
CHKA-201ENST00000265689 AP4E1Q9UPM8 1137 aa17.55■□□□□ 0.4
CHKA-201ENST00000265689 CLUHO75153 1309 aa17.55■□□□□ 0.4
CHKA-201ENST00000265689 NPR3P17342 541 aa17.55■□□□□ 0.4
CHKA-201ENST00000265689 PITX1P78337 314 aaPredicted RBP17.55■□□□□ 0.4
CHKA-201ENST00000265689 DPYSL2Q16555 572 aa17.55■□□□□ 0.4
CHKA-201ENST00000265689 BBS9Q3SYG4 887 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms