RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 CCDC142Q17RM4 750 aa9.1□□□□□ -0.95
VAPB-201ENST00000265619 USP41Q3LFD5 358 aa9.1□□□□□ -0.95
VAPB-201ENST00000265619 PGM2L1Q6PCE3 622 aa9.1□□□□□ -0.95
VAPB-201ENST00000265619 CROCCP3Q8IVE0 287 aa9.1□□□□□ -0.95
VAPB-201ENST00000265619 RDH13Q8NBN7 331 aa9.1□□□□□ -0.95
VAPB-201ENST00000265619 CFAP57Q96MR6 1250 aa9.1□□□□□ -0.95
VAPB-201ENST00000265619 HGH1Q9BTY7 390 aa9.1□□□□□ -0.95
VAPB-201ENST00000265619 INTS2Q9H0H0 1204 aaKnown RBP9.1□□□□□ -0.95
VAPB-201ENST00000265619 VPS11Q9H270 941 aa9.1□□□□□ -0.95
VAPB-201ENST00000265619 ITM2BQ9Y287 266 aa9.1□□□□□ -0.95
VAPB-201ENST00000265619 PCDHGA3Q9Y5H0 932 aa9.1□□□□□ -0.95
VAPB-201ENST00000265619 SNED1Q8TER0 1413 aa9.1□□□□□ -0.95
VAPB-201ENST00000265619 LOC100653049A0A140TA62 436 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 NFKBIEO00221 500 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 WNT10BO00744 389 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 TGFB1I1O43294 461 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 CCNT2O60583 730 aaKnown RBP9.09□□□□□ -0.95
VAPB-201ENST00000265619 UGT1A9O60656 530 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 KRT34O76011 436 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 FAM58BPP0C7Q3 252 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 DHRS4L1P0CG22 281 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 MYCLP1P12525 358 aaPredicted RBP9.09□□□□□ -0.95
VAPB-201ENST00000265619 UGT1A6P19224 532 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 UGT1A1P22309 533 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 UGT1A4P22310 534 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 UGT1A3P35503 534 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 UGT1A5P35504 534 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 RPS3AP61247 264 aaKnown RBP9.09□□□□□ -0.95
VAPB-201ENST00000265619 BST1Q10588 318 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 LRP8Q14114 963 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 PHKG1Q16816 387 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 FAM91A1Q658Y4 838 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 KBTBD6Q86V97 674 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 TBC1D15Q8TC07 691 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 C12orf43Q96C57 262 aaKnown RBP9.09□□□□□ -0.95
VAPB-201ENST00000265619 PAFAH2Q99487 392 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 ZNF408Q9H9D4 720 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 COPS7BQ9H9Q2 264 aaPredicted RBP9.09□□□□□ -0.95
VAPB-201ENST00000265619 UGT1A7Q9HAW7 530 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 UGT1A10Q9HAW8 530 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 UGT1A8Q9HAW9 530 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 XAB2Q9HCS7 855 aaKnown RBP9.09□□□□□ -0.95
VAPB-201ENST00000265619 MYOZ2Q9NPC6 264 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 TYW1Q9NV66 732 aaKnown RBP9.09□□□□□ -0.95
VAPB-201ENST00000265619 GPRC5DQ9NZD1 345 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 CNTN3Q9P232 1028 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 SOX13Q9UN79 622 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 TLL2Q9Y6L7 1015 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 SOBPA7XYQ1 873 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 PSMD12O00232 456 aaPredicted RBP9.09□□□□□ -0.95
VAPB-201ENST00000265619 INHBBP09529 407 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 BMP3P12645 472 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 EPHA3P29320 983 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 GJC1P36383 396 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 FMO5P49326 533 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 ADCY7P51828 1080 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 NKX2-5P52952 324 aaPredicted RBP9.09□□□□□ -0.95
VAPB-201ENST00000265619 BNIP3Q12983 259 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 DNAL1Q4LDG9 190 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 FGD3Q5JSP0 725 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 CLVS1Q8IUQ0 354 aaPredicted RBP9.09□□□□□ -0.95
VAPB-201ENST00000265619 RELL1Q8IUW5 271 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 TSPAN14Q8NG11 270 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 GABPB2Q8TAK5 448 aaPredicted RBP9.09□□□□□ -0.95
VAPB-201ENST00000265619 SPATA17Q96L03 361 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 REEP2Q9BRK0 252 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 TUBA8Q9NY65 449 aaPredicted RBP9.09□□□□□ -0.95
VAPB-201ENST00000265619 A0A1W2PPW3 197 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 C7orf72A4D263 438 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 ANKRD34BA5PLL1 514 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 FAM47E-STBD1D6RA91 191 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 PIK3R2O00459 728 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 LPXNO60711 386 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 NDUFB10O96000 172 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 KRT18P05783 430 aaKnown RBP9.09□□□□□ -0.95
VAPB-201ENST00000265619 ALDH3B2P48448 385 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 NEK2P51955 445 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 ARPC4P59998 168 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 DLG4P78352 724 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 KCNC4Q03721 635 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 NRF1Q16656 503 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 CCDC153Q494R4 210 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 EPC2Q52LR7 807 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 FNBP1LQ5T0N5 605 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 ALDH16A1Q8IZ83 802 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 DEFB107AQ8IZN7 70 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 ETNPPLQ8TBG4 499 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 DCAKDQ8WVC6 231 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 ISOC1Q96CN7 298 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 ZNF778Q96MU6 729 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 BIRC8Q96P09 236 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 ZNF341Q9BYN7 854 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 SLC2A11Q9BYW1 496 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 OLFML3Q9NRN5 406 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 STRIP2Q9ULQ0 834 aa9.09□□□□□ -0.95
VAPB-201ENST00000265619 TNS1Q9HBL0 1735 aaKnown RBP9.09□□□□□ -0.95
VAPB-201ENST00000265619 KRBA1A5PL33 1030 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 TGDSO95455 350 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 ENDOUP21128 410 aaKnown RBP9.08□□□□□ -0.96
VAPB-201ENST00000265619 GLRA2P23416 452 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms