RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 GRIN2DO15399 1336 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 hCG_1818297A0A087WSY0 165 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 C2CD4BA6NLJ0 364 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 DNM1LO00429 736 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 LPXNO60711 386 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 AMPD1P23109 780 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 NUMBP49757 651 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 CAV1Q03135 178 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 SLC29A2Q14542 456 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 DDR2Q16832 855 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 NPNTQ6UXI9 565 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 PID1Q7Z2X4 250 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 SH2D3CQ8N5H7 860 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 ATAD1Q8NBU5 361 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 MGARPQ8TDB4 240 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 AENQ8WTP8 325 aaKnown RBP9.7□□□□□ -0.86
SSR3-201ENST00000265044 NSMCE1Q8WV22 266 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 FBXO32Q969P5 355 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 TRIM62Q9BVG3 475 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 MRPL9Q9BYD2 267 aaKnown RBP9.7□□□□□ -0.86
SSR3-201ENST00000265044 OSBPL7Q9BZF2 842 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 VIPAS39Q9H9C1 493 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 TMEM161AQ9NX61 479 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 NAALADL1Q9UQQ1 740 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 FAM169AQ9Y6X4 670 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 PARP14Q460N5 1801 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 PRRG1O14668 218 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 ETS1P14921 441 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 MATKP42679 507 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 VCPP55072 806 aaKnown RBP9.69□□□□□ -0.86
SSR3-201ENST00000265044 SF3A3Q12874 501 aaKnown RBP eCLIP9.69□□□□□ -0.86
SSR3-201ENST00000265044 ELAVL2Q12926 359 aaKnown RBP9.69□□□□□ -0.86
SSR3-201ENST00000265044 TTC27Q6P3X3 843 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 POLNQ7Z5Q5 900 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 CROCCP2Q86T23 111 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 ANKMY2Q8IV38 441 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 DNAAF3Q8N9W5 541 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 TSEN2Q8NCE0 465 aaKnown RBP9.69□□□□□ -0.86
SSR3-201ENST00000265044 KBTBD7Q8WVZ9 684 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 LRRC19Q9H756 370 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 ADAM21Q9UKJ8 722 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 TPX2Q9ULW0 747 aaKnown RBP9.69□□□□□ -0.86
SSR3-201ENST00000265044 IL1R2P27930 398 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 TKTP29401 623 aaKnown RBP9.69□□□□□ -0.86
SSR3-201ENST00000265044 CDH5P33151 784 aaPredicted RBP9.69□□□□□ -0.86
SSR3-201ENST00000265044 PHBP35232 272 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 PCK1P35558 622 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 GATMP50440 423 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 ARL4CP56559 192 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 CCDC14Q49A88 953 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 C10orf120Q5SQS8 335 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 CLEC20AQ6ZU45 233 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 CTU1Q7Z7A3 348 aaKnown RBP9.69□□□□□ -0.86
SSR3-201ENST00000265044 CDKL3Q8IVW4 592 aaPredicted RBP9.69□□□□□ -0.86
SSR3-201ENST00000265044 ANKRD42Q8N9B4 389 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 NETO2Q8NC67 525 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 ACBD6Q9BR61 282 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 ADAM33Q9BZ11 813 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 IQCGQ9H095 443 aaKnown RBP9.69□□□□□ -0.86
SSR3-201ENST00000265044 PCYOX1Q9UHG3 505 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 SF3B1O75533 1304 aaKnown RBP eCLIP9.69□□□□□ -0.86
SSR3-201ENST00000265044 CITO14578 2027 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 PLXNA1Q9UIW2 1896 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 EXOC1LA0A1B0GW35 172 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 F9P00740 461 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 APOEP02649 317 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 ATP5DP30049 168 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 EIF3BP55884 814 aaKnown RBP9.69□□□□□ -0.86
SSR3-201ENST00000265044 PTP4A2Q12974 167 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 UPP1Q16831 310 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 TRIM60Q495X7 471 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 INTS6LQ5JSJ4 861 aaKnown RBP9.69□□□□□ -0.86
SSR3-201ENST00000265044 LRRC31Q6UY01 552 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 SLC26A9Q7LBE3 791 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 PCGF5Q86SE9 256 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 TMEM110Q86TL2 294 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 VPS52Q8N1B4 723 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 STK32AQ8WU08 396 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 PAWRQ96IZ0 340 aaKnown RBP9.69□□□□□ -0.86
SSR3-201ENST00000265044 AGAP3Q96P47 875 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 SLC4A5Q9BY07 1137 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 DNAJB4Q9UDY4 337 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 ADAM28Q9UKQ2 775 aa9.69□□□□□ -0.86
SSR3-201ENST00000265044 DFFAO00273 331 aa9.68□□□□□ -0.86
SSR3-201ENST00000265044 CAND2O75155 1236 aa9.68□□□□□ -0.86
SSR3-201ENST00000265044 CTCFP49711 727 aaPredicted RBP9.68□□□□□ -0.86
SSR3-201ENST00000265044 EFEMP1Q12805 493 aa9.68□□□□□ -0.86
SSR3-201ENST00000265044 HIF1AQ16665 826 aa9.68□□□□□ -0.86
SSR3-201ENST00000265044 ALKAL1Q6UXT8 129 aa9.68□□□□□ -0.86
SSR3-201ENST00000265044 TAOK1Q7L7X3 1001 aa9.68□□□□□ -0.86
SSR3-201ENST00000265044 OTUD6BQ8N6M0 293 aa9.68□□□□□ -0.86
SSR3-201ENST00000265044 UBR7Q8N806 425 aa9.68□□□□□ -0.86
SSR3-201ENST00000265044 C3orf58Q8NDZ4 430 aa9.68□□□□□ -0.86
SSR3-201ENST00000265044 GIPC2Q8TF65 315 aa9.68□□□□□ -0.86
SSR3-201ENST00000265044 CD101Q93033 1021 aa9.68□□□□□ -0.86
SSR3-201ENST00000265044 SEMA4AQ9H3S1 761 aa9.68□□□□□ -0.86
SSR3-201ENST00000265044 MEFVO15553 781 aaPredicted RBP9.68□□□□□ -0.86
SSR3-201ENST00000265044 IGFBP6P24592 240 aaPredicted RBP9.68□□□□□ -0.86
SSR3-201ENST00000265044 STIP1P31948 543 aaKnown RBP9.68□□□□□ -0.86
SSR3-201ENST00000265044 CDKN2BP42772 138 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms