RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 KBTBD13C9JR72 458 aa18.53■□□□□ 0.56
COL5A3-201ENST00000264828 DARSP14868 501 aaKnown RBP18.53■□□□□ 0.56
COL5A3-201ENST00000264828 CYP11B2P19099 503 aa18.53■□□□□ 0.56
COL5A3-201ENST00000264828 ZBTB49Q6ZSB9 765 aa18.53■□□□□ 0.56
COL5A3-201ENST00000264828 UBE2OQ9C0C9 1292 aaKnown RBP18.53■□□□□ 0.56
COL5A3-201ENST00000264828 DCLRE1BQ9H816 532 aa18.53■□□□□ 0.56
COL5A3-201ENST00000264828 AAR2Q9Y312 384 aaKnown RBP18.53■□□□□ 0.56
COL5A3-201ENST00000264828 ASS1P00966 412 aaKnown RBP18.53■□□□□ 0.56
COL5A3-201ENST00000264828 PSMB9P28065 219 aa18.53■□□□□ 0.56
COL5A3-201ENST00000264828 TBCELQ5QJ74 424 aa18.53■□□□□ 0.56
COL5A3-201ENST00000264828 SPOCD1Q6ZMY3 1216 aa18.53■□□□□ 0.56
COL5A3-201ENST00000264828 TRIM48Q8IWZ4 208 aa18.53■□□□□ 0.56
COL5A3-201ENST00000264828 MPP4Q96JB8 637 aa18.53■□□□□ 0.56
COL5A3-201ENST00000264828 SEPHS2Q99611 448 aa18.53■□□□□ 0.56
COL5A3-201ENST00000264828 TMEM39BQ9GZU3 492 aa18.53■□□□□ 0.56
COL5A3-201ENST00000264828 DIABLOQ9NR28 239 aa18.53■□□□□ 0.56
COL5A3-201ENST00000264828 DAPK2Q9UIK4 370 aa18.53■□□□□ 0.56
COL5A3-201ENST00000264828 PCDHB7Q9Y5E2 793 aa18.53■□□□□ 0.56
COL5A3-201ENST00000264828 TRIM24O15164 1050 aa18.53■□□□□ 0.56
COL5A3-201ENST00000264828 TIMM44O43615 452 aa18.53■□□□□ 0.56
COL5A3-201ENST00000264828 RARGP13631 454 aa18.53■□□□□ 0.56
COL5A3-201ENST00000264828 AGKQ53H12 422 aa18.53■□□□□ 0.56
COL5A3-201ENST00000264828 RSBN1Q5VWQ0 802 aaPredicted RBP18.53■□□□□ 0.56
COL5A3-201ENST00000264828 MIB1Q86YT6 1006 aa18.53■□□□□ 0.56
COL5A3-201ENST00000264828 ATG16L2Q8NAA4 619 aa18.53■□□□□ 0.56
COL5A3-201ENST00000264828 VMP1Q96GC9 406 aa18.53■□□□□ 0.56
COL5A3-201ENST00000264828 KIDINS220Q9ULH0 1771 aa18.52■□□□□ 0.56
COL5A3-201ENST00000264828 FAM20BO75063 409 aa18.52■□□□□ 0.56
COL5A3-201ENST00000264828 ODC1P11926 461 aa18.52■□□□□ 0.56
COL5A3-201ENST00000264828 GSSP48637 474 aa18.52■□□□□ 0.56
COL5A3-201ENST00000264828 USP39Q53GS9 565 aaKnown RBP18.52■□□□□ 0.56
COL5A3-201ENST00000264828 CARNMT1Q8N4J0 409 aa18.52■□□□□ 0.56
COL5A3-201ENST00000264828 SEMA4DQ92854 862 aa18.52■□□□□ 0.56
COL5A3-201ENST00000264828 SLITRK1Q96PX8 696 aa18.52■□□□□ 0.56
COL5A3-201ENST00000264828 VAC14Q08AM6 782 aa18.52■□□□□ 0.56
COL5A3-201ENST00000264828 TAF1CQ15572 869 aaPredicted RBP18.52■□□□□ 0.56
COL5A3-201ENST00000264828 NAIF1Q69YI7 327 aaPredicted RBP18.52■□□□□ 0.56
COL5A3-201ENST00000264828 SLFN11Q7Z7L1 901 aa18.52■□□□□ 0.56
COL5A3-201ENST00000264828 C19orf18Q8NEA5 215 aa18.52■□□□□ 0.56
COL5A3-201ENST00000264828 FBXO25Q8TCJ0 367 aa18.52■□□□□ 0.56
COL5A3-201ENST00000264828 TMEM237Q96Q45 408 aa18.52■□□□□ 0.56
COL5A3-201ENST00000264828 VPS9D1Q9Y2B5 631 aa18.52■□□□□ 0.56
COL5A3-201ENST00000264828 O00370 1275 aa18.52■□□□□ 0.56
COL5A3-201ENST00000264828 HBP1O60381 514 aa18.52■□□□□ 0.56
COL5A3-201ENST00000264828 YY1P25490 414 aa18.52■□□□□ 0.56
COL5A3-201ENST00000264828 NCF4Q15080 339 aa18.52■□□□□ 0.56
COL5A3-201ENST00000264828 ADRM1Q16186 407 aa18.52■□□□□ 0.56
COL5A3-201ENST00000264828 DGKDQ16760 1214 aa18.52■□□□□ 0.56
COL5A3-201ENST00000264828 FBXO33Q7Z6M2 555 aa18.52■□□□□ 0.56
COL5A3-201ENST00000264828 MYO1HQ8N1T3 1032 aa18.52■□□□□ 0.56
COL5A3-201ENST00000264828 MIEF2Q96C03 454 aa18.52■□□□□ 0.56
COL5A3-201ENST00000264828 SPRTNQ9H040 489 aaPredicted RBP18.52■□□□□ 0.56
COL5A3-201ENST00000264828 PTPN4P29074 926 aa18.52■□□□□ 0.55
COL5A3-201ENST00000264828 CCT8P50990 548 aa18.52■□□□□ 0.55
COL5A3-201ENST00000264828 CACNA2D1P54289 1103 aa18.52■□□□□ 0.55
COL5A3-201ENST00000264828 NCKAP1LP55160 1127 aa18.52■□□□□ 0.55
COL5A3-201ENST00000264828 RIPOR1Q6ZS17 1223 aa18.52■□□□□ 0.55
COL5A3-201ENST00000264828 LPCAT2Q7L5N7 544 aa18.52■□□□□ 0.55
COL5A3-201ENST00000264828 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.52■□□□□ 0.55
COL5A3-201ENST00000264828 CCDC126Q96EE4 140 aa18.52■□□□□ 0.55
COL5A3-201ENST00000264828 SEMA6BQ9H3T3 888 aa18.52■□□□□ 0.55
COL5A3-201ENST00000264828 ANKEF1Q9NU02 776 aa18.52■□□□□ 0.55
COL5A3-201ENST00000264828 DDX20Q9UHI6 824 aaKnown RBP18.52■□□□□ 0.55
COL5A3-201ENST00000264828 PLAGL2Q9UPG8 496 aa18.52■□□□□ 0.55
COL5A3-201ENST00000264828 CPA3P15088 417 aa18.51■□□□□ 0.55
COL5A3-201ENST00000264828 SHROOM1Q2M3G4 852 aaPredicted RBP18.51■□□□□ 0.55
COL5A3-201ENST00000264828 FIG4Q92562 907 aa18.51■□□□□ 0.55
COL5A3-201ENST00000264828 PRCCQ92733 491 aaPredicted RBP18.51■□□□□ 0.55
COL5A3-201ENST00000264828 HDHD2Q9H0R4 259 aa18.51■□□□□ 0.55
COL5A3-201ENST00000264828 LRRC40Q9H9A6 602 aa18.51■□□□□ 0.55
COL5A3-201ENST00000264828 ADAMTS13Q76LX8 1427 aa18.51■□□□□ 0.55
COL5A3-201ENST00000264828 MAPK10P53779 464 aa18.51■□□□□ 0.55
COL5A3-201ENST00000264828 TYW3Q6IPR3 259 aaKnown RBP18.51■□□□□ 0.55
COL5A3-201ENST00000264828 RXFP1Q9HBX9 757 aa18.51■□□□□ 0.55
COL5A3-201ENST00000264828 USP18Q9UMW8 372 aa18.51■□□□□ 0.55
COL5A3-201ENST00000264828 DGKKQ5KSL6 1271 aa18.51■□□□□ 0.55
COL5A3-201ENST00000264828 TMC5Q6UXY8 1006 aa18.51■□□□□ 0.55
COL5A3-201ENST00000264828 PTAR1Q7Z6K3 402 aaPredicted RBP18.51■□□□□ 0.55
COL5A3-201ENST00000264828 CBWD1Q9BRT8 395 aa18.51■□□□□ 0.55
COL5A3-201ENST00000264828 PADI4Q9UM07 663 aa18.51■□□□□ 0.55
COL5A3-201ENST00000264828 GNG14A0A1W2PPG7 69 aa18.51■□□□□ 0.55
COL5A3-201ENST00000264828 PEX1O43933 1283 aa18.51■□□□□ 0.55
COL5A3-201ENST00000264828 GLI1P08151 1106 aa18.51■□□□□ 0.55
COL5A3-201ENST00000264828 MAPK11Q15759 364 aa18.51■□□□□ 0.55
COL5A3-201ENST00000264828 ACTRT1Q8TDG2 376 aa18.51■□□□□ 0.55
COL5A3-201ENST00000264828 GDPD5Q8WTR4 605 aa18.51■□□□□ 0.55
COL5A3-201ENST00000264828 FAM151AQ8WW52 585 aa18.51■□□□□ 0.55
COL5A3-201ENST00000264828 ELMO3Q96BJ8 720 aa18.51■□□□□ 0.55
COL5A3-201ENST00000264828 MAP3K14Q99558 947 aa18.51■□□□□ 0.55
COL5A3-201ENST00000264828 CEP41Q9BYV8 373 aa18.51■□□□□ 0.55
COL5A3-201ENST00000264828 FRMD8P1Q9BZ68 369 aaPredicted RBP18.51■□□□□ 0.55
COL5A3-201ENST00000264828 PAPOLBQ9NRJ5 636 aaKnown RBP18.51■□□□□ 0.55
COL5A3-201ENST00000264828 F5H5T6 163 aa18.51■□□□□ 0.55
COL5A3-201ENST00000264828 ZNF862O60290 1169 aa18.51■□□□□ 0.55
COL5A3-201ENST00000264828 KLRK1P26718 216 aa18.51■□□□□ 0.55
COL5A3-201ENST00000264828 COX10Q12887 443 aa18.51■□□□□ 0.55
COL5A3-201ENST00000264828 PDIA6Q15084 440 aa18.51■□□□□ 0.55
COL5A3-201ENST00000264828 ISLR2Q6UXK2 745 aa18.51■□□□□ 0.55
COL5A3-201ENST00000264828 UXS1Q8NBZ7 420 aa18.51■□□□□ 0.55
COL5A3-201ENST00000264828 GPRASP2Q96D09 838 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms