RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 A0A0B4J269 797 aa20.54■□□□□ 0.88
CSPG5-201ENST00000264723 CASTOR2A6NHX0 329 aa20.54■□□□□ 0.88
CSPG5-201ENST00000264723 CPB1P15086 417 aa20.54■□□□□ 0.88
CSPG5-201ENST00000264723 KCNA4P22459 653 aa20.54■□□□□ 0.88
CSPG5-201ENST00000264723 STIP1P31948 543 aaKnown RBP20.54■□□□□ 0.88
CSPG5-201ENST00000264723 PPM1FP49593 454 aaPredicted RBP20.54■□□□□ 0.88
CSPG5-201ENST00000264723 BNIP1Q12981 228 aa20.54■□□□□ 0.88
CSPG5-201ENST00000264723 ZC3H12AQ5D1E8 599 aaKnown RBP20.54■□□□□ 0.88
CSPG5-201ENST00000264723 NAIF1Q69YI7 327 aaPredicted RBP20.54■□□□□ 0.88
CSPG5-201ENST00000264723 CPXM1Q96SM3 734 aa20.54■□□□□ 0.88
CSPG5-201ENST00000264723 NR2E3Q9Y5X4 410 aa20.54■□□□□ 0.88
CSPG5-201ENST00000264723 GOLGB1Q14789 3259 aaKnown RBP20.54■□□□□ 0.88
CSPG5-201ENST00000264723 NFASCO94856 1347 aa20.54■□□□□ 0.88
CSPG5-201ENST00000264723 GPC4O75487 556 aa20.54■□□□□ 0.88
CSPG5-201ENST00000264723 PTPN4P29074 926 aa20.54■□□□□ 0.88
CSPG5-201ENST00000264723 WNT7BP56706 349 aa20.54■□□□□ 0.88
CSPG5-201ENST00000264723 ACVR2BQ13705 512 aa20.54■□□□□ 0.88
CSPG5-201ENST00000264723 CYP1B1Q16678 543 aa20.54■□□□□ 0.88
CSPG5-201ENST00000264723 EP400NLQ6ZTU2 488 aa20.54■□□□□ 0.88
CSPG5-201ENST00000264723 PHF13Q86YI8 300 aaPredicted RBP20.54■□□□□ 0.88
CSPG5-201ENST00000264723 EPB41L4BQ9H329 900 aa20.54■□□□□ 0.88
CSPG5-201ENST00000264723 ABHD16BQ9H3Z7 469 aa20.54■□□□□ 0.88
CSPG5-201ENST00000264723 PLEKHA5Q9HAU0 1116 aa20.54■□□□□ 0.88
CSPG5-201ENST00000264723 PACSIN3Q9UKS6 424 aa20.54■□□□□ 0.88
CSPG5-201ENST00000264723 HADHBP55084 474 aaKnown RBP20.54■□□□□ 0.88
CSPG5-201ENST00000264723 SP2Q02086 613 aa20.54■□□□□ 0.88
CSPG5-201ENST00000264723 POU5F1BQ06416 359 aa20.54■□□□□ 0.88
CSPG5-201ENST00000264723 TTC39BQ5VTQ0 682 aaPredicted RBP20.54■□□□□ 0.88
CSPG5-201ENST00000264723 PLEKHA7Q6IQ23 1121 aa20.54■□□□□ 0.88
CSPG5-201ENST00000264723 TMEM130Q8N3G9 435 aa20.54■□□□□ 0.88
CSPG5-201ENST00000264723 CNPY3Q9BT09 278 aa20.54■□□□□ 0.88
CSPG5-201ENST00000264723 ADAM7Q9H2U9 754 aa20.54■□□□□ 0.88
CSPG5-201ENST00000264723 YY1AP1Q9H869 796 aa20.54■□□□□ 0.88
CSPG5-201ENST00000264723 CYB561D2O14569 222 aa20.53■□□□□ 0.88
CSPG5-201ENST00000264723 LMNAP02545 664 aaKnown RBP20.53■□□□□ 0.88
CSPG5-201ENST00000264723 PDK4Q16654 411 aa20.53■□□□□ 0.88
CSPG5-201ENST00000264723 MMEL1Q495T6 779 aa20.53■□□□□ 0.88
CSPG5-201ENST00000264723 EFCAB3Q8N7B9 438 aa20.53■□□□□ 0.88
CSPG5-201ENST00000264723 ARHGAP28Q9P2N2 729 aa20.53■□□□□ 0.88
CSPG5-201ENST00000264723 C17orf102A2RUQ5 167 aa20.53■□□□□ 0.88
CSPG5-201ENST00000264723 SOWAHBA6NEL2 793 aa20.53■□□□□ 0.88
CSPG5-201ENST00000264723 GRIN3BO60391 1043 aa20.53■□□□□ 0.88
CSPG5-201ENST00000264723 USP12O75317 370 aa20.53■□□□□ 0.88
CSPG5-201ENST00000264723 GLI3P10071 1580 aa20.53■□□□□ 0.88
CSPG5-201ENST00000264723 TCN1P20061 433 aaPredicted RBP20.53■□□□□ 0.88
CSPG5-201ENST00000264723 ZNF280AP59817 542 aaPredicted RBP20.53■□□□□ 0.88
CSPG5-201ENST00000264723 NBPF20Q3BBV1 942 aa20.53■□□□□ 0.88
CSPG5-201ENST00000264723 FBXO47Q5MNV8 452 aa20.53■□□□□ 0.88
CSPG5-201ENST00000264723 SH3PXD2AQ5TCZ1 1133 aa20.53■□□□□ 0.88
CSPG5-201ENST00000264723 FAM117BQ6P1L5 589 aa20.53■□□□□ 0.88
CSPG5-201ENST00000264723 RASSF3Q86WH2 238 aa20.53■□□□□ 0.88
CSPG5-201ENST00000264723 OR6P1Q8NGX9 317 aa20.53■□□□□ 0.88
CSPG5-201ENST00000264723 ZNF518BQ9C0D4 1074 aa20.53■□□□□ 0.88
CSPG5-201ENST00000264723 COQ4Q9Y3A0 265 aa20.53■□□□□ 0.88
CSPG5-201ENST00000264723 MGRN1O60291 552 aa20.53■□□□□ 0.88
CSPG5-201ENST00000264723 AP1G2O75843 785 aa20.53■□□□□ 0.88
CSPG5-201ENST00000264723 TEX9Q8N6V9 391 aa20.53■□□□□ 0.88
CSPG5-201ENST00000264723 CD101Q93033 1021 aa20.53■□□□□ 0.88
CSPG5-201ENST00000264723 UBP1Q9NZI7 540 aa20.53■□□□□ 0.88
CSPG5-201ENST00000264723 BARX2Q9UMQ3 279 aaPredicted RBP20.53■□□□□ 0.88
CSPG5-201ENST00000264723 UBR2Q8IWV8 1755 aa20.53■□□□□ 0.88
CSPG5-201ENST00000264723 ASS1P00966 412 aaKnown RBP20.53■□□□□ 0.88
CSPG5-201ENST00000264723 KCNA3P22001 575 aa20.53■□□□□ 0.88
CSPG5-201ENST00000264723 SLC26A11Q86WA9 606 aa20.53■□□□□ 0.88
CSPG5-201ENST00000264723 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.53■□□□□ 0.88
CSPG5-201ENST00000264723 DDX1Q92499 740 aaKnown RBP20.53■□□□□ 0.88
CSPG5-201ENST00000264723 EDF1O60869 148 aaKnown RBP20.52■□□□□ 0.88
CSPG5-201ENST00000264723 RECQL4O94761 1208 aa20.52■□□□□ 0.88
CSPG5-201ENST00000264723 LSM8O95777 96 aaKnown RBP20.52■□□□□ 0.88
CSPG5-201ENST00000264723 FAM200BP0CF97 657 aa20.52■□□□□ 0.88
CSPG5-201ENST00000264723 CRYMQ14894 314 aa20.52■□□□□ 0.88
CSPG5-201ENST00000264723 SV2CQ496J9 727 aa20.52■□□□□ 0.88
CSPG5-201ENST00000264723 SNX30Q5VWJ9 437 aa20.52■□□□□ 0.88
CSPG5-201ENST00000264723 POLNQ7Z5Q5 900 aa20.52■□□□□ 0.88
CSPG5-201ENST00000264723 MYLK4Q86YV6 388 aaPredicted RBP20.52■□□□□ 0.88
CSPG5-201ENST00000264723 SEC14L1Q92503 715 aa20.52■□□□□ 0.88
CSPG5-201ENST00000264723 ZFYVE28Q9HCC9 887 aa20.52■□□□□ 0.88
CSPG5-201ENST00000264723 MCM8Q9UJA3 840 aa20.52■□□□□ 0.88
CSPG5-201ENST00000264723 TTLL13PA6NNM8 815 aa20.52■□□□□ 0.88
CSPG5-201ENST00000264723 EEF2KO00418 725 aaKnown RBP20.52■□□□□ 0.88
CSPG5-201ENST00000264723 AIM2O14862 343 aa20.52■□□□□ 0.88
CSPG5-201ENST00000264723 KRT36O76013 467 aa20.52■□□□□ 0.88
CSPG5-201ENST00000264723 MAP3K7CLP57077 242 aa20.52■□□□□ 0.88
CSPG5-201ENST00000264723 DPY19L2P1Q6NXN4 242 aa20.52■□□□□ 0.88
CSPG5-201ENST00000264723 TLK2Q86UE8 772 aa20.52■□□□□ 0.88
CSPG5-201ENST00000264723 MIEF2Q96C03 454 aa20.52■□□□□ 0.88
CSPG5-201ENST00000264723 KATNAL1Q9BW62 490 aa20.52■□□□□ 0.88
CSPG5-201ENST00000264723 TMEM134Q9H6X4 195 aa20.52■□□□□ 0.88
CSPG5-201ENST00000264723 CHKBQ9Y259 395 aa20.52■□□□□ 0.88
CSPG5-201ENST00000264723 ALOX15BO15296 676 aa20.52■□□□□ 0.87
CSPG5-201ENST00000264723 POMCP01189 267 aa20.52■□□□□ 0.87
CSPG5-201ENST00000264723 OR1G1P47890 313 aa20.52■□□□□ 0.87
CSPG5-201ENST00000264723 SGF29Q96ES7 293 aa20.52■□□□□ 0.87
CSPG5-201ENST00000264723 TCRBV7S3A2A0A539 114 aa20.51■□□□□ 0.87
CSPG5-201ENST00000264723 GOLGA8TH3BQL2 631 aa20.51■□□□□ 0.87
CSPG5-201ENST00000264723 LRCH4O75427 683 aa20.51■□□□□ 0.87
CSPG5-201ENST00000264723 MCF2P10911 925 aa20.51■□□□□ 0.87
CSPG5-201ENST00000264723 ZFXP17010 805 aaPredicted RBP20.51■□□□□ 0.87
CSPG5-201ENST00000264723 CPT1AP50416 773 aa20.51■□□□□ 0.87
CSPG5-201ENST00000264723 CDC42EP1Q00587 391 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms