RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 TAF10Q12962 218 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 MAMLD1Q13495 774 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 E2F5Q15329 346 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 SDE2Q6IQ49 451 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 CCDC137Q6PK04 289 aaKnown RBP8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 COLGALT1Q8NBJ5 622 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 EXD1Q8NHP7 514 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 GPR152Q8TDT2 470 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 BORCS6Q96GS4 357 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 HINFPQ9BQA5 517 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 APOL5Q9BWW9 433 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 DYRK4Q9NR20 520 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 MIOSQ9NXC5 875 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 NEMP1O14524 444 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 TLR5O60602 858 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 KRT14P02533 472 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 CYP1A2P05177 515 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 C8AP07357 584 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 RBP3P10745 1247 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 MMP8P22894 467 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 RFC1P35251 1148 aaPredicted RBP8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 TWF1Q12792 350 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 SEPT6Q14141 434 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 UPP1Q16831 310 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 BBS9Q3SYG4 887 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 TTC30AQ86WT1 665 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 LINC01465Q8N7H1 131 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 PHOSPHO2Q8TCD6 241 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 B3GALT6Q96L58 329 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 ISCUQ9H1K1 167 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 TLR9Q9NR96 1032 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 CAPN6Q9Y6Q1 641 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 SBF1O95248 1867 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 KCNN4O15554 427 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 MGEA5O60502 916 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 GJB6O95452 261 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 SLC4A1P02730 911 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 PLA2G4AP47712 749 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 ZNF143P52747 638 aaPredicted RBP8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 COPS2P61201 443 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 WDR5P61964 334 aaKnown RBP8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 ZNF697Q5TEC3 545 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 IRGQQ8WZA9 623 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 TFAP2BQ92481 460 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 TBC1D31Q96DN5 1066 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 BCO2Q9BYV7 579 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 VRTNQ9H8Y1 702 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 ASB3Q9Y575 518 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 GOLGA8CPA6NN73 597 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 PTGESO14684 152 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 KIAA0355O15063 1070 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 DAB1O75553 588 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 RHOCP08134 193 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 MIPP30301 263 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 MATKP42679 507 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 SLC5A3P53794 718 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 OXCT1P55809 520 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 BIRC2Q13490 618 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 DHX34Q14147 1143 aaKnown RBP8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 PTPN20Q4JDL3 420 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 DNAJC21Q5F1R6 531 aaKnown RBP8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 TFDP3Q5H9I0 405 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 SLC13A5Q86YT5 568 aaPredicted RBP8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 CARNMT1Q8N4J0 409 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 TMA16Q96EY4 203 aaKnown RBP8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 PCDHB18PQ96TA0 734 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 HAPLN2Q9GZV7 340 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 LMCD1Q9NZU5 365 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 SNX24Q9Y343 169 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 MYH7BA7E2Y1 1941 aa8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 PTPRJQ12913 1337 aa8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 MEIS3P2A8K0S8 358 aa8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 RNF225M0QZC1 329 aaPredicted RBP8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 RB1P06400 928 aa8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 PTPN2P17706 415 aa8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 SOX4Q06945 474 aaPredicted RBP8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 CAPN12Q6ZSI9 719 aa8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 CENPUQ71F23 418 aa8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 APTXQ7Z2E3 356 aaKnown RBP8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 POF1BQ8WVV4 589 aa8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 AUTS2Q8WXX7 1259 aa8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 CFAP57Q96MR6 1250 aa8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 TKTL2Q9H0I9 626 aa8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 CCL16O15467 120 aa8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 PSMD3O43242 534 aa8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 ERBB2P04626 1255 aa8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 ARL4CP56559 192 aa8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 CAV1Q03135 178 aa8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 GPS1Q13098 491 aa8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 ARFGAP2Q8N6H7 521 aa8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 ZNF557Q8N988 423 aaPredicted RBP8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 KLHL23Q8NBE8 558 aa8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 SPATA4Q8NEY3 305 aa8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 PPP1R2P1Q96PQ5 205 aa8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 CPXM1Q96SM3 734 aa8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 FRMD8P1Q9BZ68 369 aaPredicted RBP8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 ALG13Q9NP73 1137 aaKnown RBP8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 DDHD2O94830 711 aa8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 BMPR1AP36894 532 aa8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 ARL1P40616 181 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms